RNA–Protein interactions for RNA: ENST00000284637.13

SH3RF1-201, Transcript of SH3 domain containing ring finger 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3RF1, Length 5,272 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-201ENST00000284637 MRPL17Q9NRX2 175 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 MFHAS1Q9Y4C4 1052 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 SNX10Q9Y5X0 201 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 GPR25O00155 361 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 C9P02748 559 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CKMT2P17540 419 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ATF6P18850 670 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CXCR3P49682 368 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CDH15P55291 814 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 PRKD1Q15139 912 aaPredicted RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 NOMO2Q5JPE7 1267 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 FAM220AQ7Z4H9 259 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CCDC28AQ8IWP9 274 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 DIRAS2Q96HU8 199 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CLPXO76031 633 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 SCRN3Q0VDG4 424 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 PCBP1Q15365 356 aaKnown RBP eCLIP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 TARBP2Q15633 366 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 KLHL35Q6PF15 583 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CLP1Q92989 425 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 FAM105AQ9NUU6 356 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 TBC1D3BA6NDS4 549 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 H7C0S8 307 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 OR4Q2P0C623 313 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 RBM20Q5T481 1227 aaKnown RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 CYP2U1Q7Z449 544 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ZNF420Q8TAQ5 688 aaPredicted RBP16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 DPEP3Q9H4B8 488 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 SGK2Q9HBY8 427 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 ASF1AQ9Y294 204 aa16.32■□□□□ 0.2
SH3RF1-201ENST00000284637 TCRBV7S3A2A0A539 114 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PLK4O00444 970 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 AIREO43918 545 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 OR4F21O95013 312 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 FABP3P05413 133 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 YAP1P46937 504 aaKnown RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 COLGALT2Q8IYK4 626 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 GPR20Q99678 358 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 MST1RQ04912 1400 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 A0A1W2PPW3 197 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 FPGTO14772 594 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 STK16O75716 305 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC7A1P30825 629 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PTPN9P43378 593 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 CLCN2P51788 898 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 IL18Q14116 193 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PACRGLQ8N7B6 248 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 SIPA1Q96FS4 1042 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 S100A13Q99584 98 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 MCMBPQ9BTE3 642 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 ZNF395Q9H8N7 513 aaPredicted RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 GDAP2Q9NXN4 497 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 MAT2BQ9NZL9 334 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PPLO60437 1756 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 TNFRSF11BO00300 401 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 TIE1P35590 1138 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 HJURPQ8NCD3 748 aaPredicted RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 RAD51AP1Q96B01 352 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 TCF25Q9BQ70 676 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 COL20A1Q9P218 1284 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 IFT80Q9P2H3 777 aaPredicted RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 NOBOXO60393 691 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PSMA1P25786 263 aaKnown RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 ELP6Q0PNE2 266 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 CHPFQ8IZ52 775 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 CXorf40AQ8TE69 158 aa16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 PTCD2Q8WV60 388 aaKnown RBP16.31■□□□□ 0.2
SH3RF1-201ENST00000284637 HTR3EA5X5Y0 456 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 SLC15A5A6NIM6 579 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 hCG_2039718K7EN88 272 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 HIST1H2ABP04908 130 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 TAS2R41P59536 307 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 HIST3H2AQ7L7L0 130 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 HIST1H2ACQ93077 130 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ROPN1LQ96C74 230 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ATG10Q9H0Y0 220 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 DTLQ9NZJ0 730 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 E9PAM4 449 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 UGT2B17O75795 530 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 HOXD12P35452 270 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 NDUFV1P49821 464 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 IRF9Q00978 393 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 CCDC36Q8IYA8 594 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 MPP5Q8N3R9 675 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 KBTBD7Q8WVZ9 684 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ART5Q96L15 291 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 PRDM8Q9NQV8 689 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 NEMP2A6NFY4 417 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 NT5C1B-RDH14C9J2C7 533 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 NDST3O95803 873 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ARL2P36404 184 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 MXD1Q05195 221 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 TAF10Q12962 218 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 ADGRG6Q86SQ4 1221 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 MYO19Q96H55 970 aa16.3■□□□□ 0.2
SH3RF1-201ENST00000284637 SPACA7Q96KW9 195 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms