RNA–Protein interactions for RNA: ENST00000595945.5

SHKBP1-211, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-211ENST00000595945 WDR4P57081 412 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 DLG1Q12959 904 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 IRF4Q15306 451 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TJAP1Q5JTD0 557 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TMEM31Q5JXX7 168 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3GQ6DHY5 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 RAET1GQ6H3X3 334 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3CQ6IPX1 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 PNCKQ6P2M8 343 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 RAPH1Q70E73 1250 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 PIM3Q86V86 326 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 PHYKPLQ8IUZ5 450 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SPNS2Q8IVW8 549 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TBC1D3Q8IZP1 549 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CLDN19Q8N6F1 224 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GIMAP7Q8NHV1 300 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CENPTQ96BT3 561 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 UBXN10Q96LJ8 280 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GPR78Q96P69 363 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 LENG8Q96PV6 779 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GPR21Q99679 349 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC13A1Q9BZW2 595 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 MBNL1Q9NR56 388 aaKnown RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 IGSF5Q9NSI5 407 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 WSB2Q9NYS7 404 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TAS2R13Q9NYV9 303 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC17A7Q9P2U7 560 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 GALPQ9UBC7 116 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 MBD1Q9UIS9 605 aaPredicted RBP14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 TLK1Q9UKI8 766 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 EMCNQ9ULC0 261 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 SPAG17Q6Q759 2223 aa14.57□□□□□ -0.08
SHKBP1-211ENST00000595945 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 STK25O00506 426 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 RAD51BO15315 384 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 LATO43561 262 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 VPS26AO75436 327 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 ASMTLO95671 621 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 SEMA4FO95754 770 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 ATP1B2P14415 290 aaPredicted RBP14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 MSH3P20585 1137 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 SKIV2L2P42285 1042 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 SGCGQ13326 291 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 LRRC14Q15048 493 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 PTRHD1Q6GMV3 140 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 PGBD3Q8N328 593 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 CAMKK1Q8N5S9 505 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 ANKRD42Q8N9B4 389 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 DENND6BQ8NEG7 585 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 CD200R1Q8TD46 325 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 KCTD4Q8WVF5 259 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 ANKRD49Q8WVL7 239 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 KLK6Q92876 244 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 DCUN1D1Q96GG9 259 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC30A3Q99726 388 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 TEX101Q9BY14 249 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 C12orf65Q9H3J6 166 aaKnown RBP14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 GPAMQ9HCL2 828 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF358Q9NW07 568 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 NKIRAS1Q9NYS0 192 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 TMEM216Q9P0N5 145 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 GRID1Q9ULK0 1009 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 DHRS7Q9Y394 339 aa14.56□□□□□ -0.08
SHKBP1-211ENST00000595945 LRP4O75096 1905 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 IGHV1OR15-9A0A0B4J2B8 117 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PRR23AA6NEV1 266 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 IQCF5A8MTL0 148 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 K7ESF4 209 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 INPP4BO15327 924 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PLIN3O60664 434 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF217O75362 1048 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 MTX2O75431 263 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 KLHL2O95198 593 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 SLC25A14O95258 325 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PAK4O96013 591 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PDGFBP01127 241 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PCCBP05166 539 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 DCNP07585 359 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF37AP17032 561 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 IGFALSP35858 605 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 MDH1P40925 334 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 CCR5P51681 352 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 ZNF648Q5T619 568 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 N4BP2L1Q5TBK1 243 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 PAQR3Q6TCH7 311 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 KYAT3Q6YP21 454 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 ADGRG6Q86SQ4 1221 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 RASGEF1AQ8N9B8 481 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 SIDT2Q8NBJ9 832 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 GDAP1Q8TB36 358 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 NAT14Q8WUY8 206 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 NXNL1Q96CM4 212 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 TOE1Q96GM8 510 aaKnown RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 HIC2Q96JB3 615 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 C1QTNF7Q9BXJ2 289 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 FAM126AQ9BYI3 521 aaPredicted RBP14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 EPHX3Q9H6B9 360 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 KLHL42Q9P2K6 505 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 CYP8B1Q9UNU6 501 aa14.55□□□□□ -0.08
SHKBP1-211ENST00000595945 QSOX1O00391 747 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 164.9 ms