RNA–Protein interactions for RNA: ENST00000594965.1

GTF2F1-204, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-204ENST00000594965 DDHD1Q8NEL9 900 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 OR13C4Q8NGS5 318 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 GDAP1Q8TB36 358 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 TIMM29Q9BSF4 260 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 STRADBQ9C0K7 418 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 SARS2Q9NP81 518 aaKnown RBP22■■□□□ 1.11
GTF2F1-204ENST00000594965 FKBPLQ9UIM3 349 aa22■■□□□ 1.11
GTF2F1-204ENST00000594965 C2orf81A6NN90 581 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 PLD2O14939 933 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 TNFSF15O95150 251 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 HOXB3P14651 431 aaPredicted RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 CTSCP53634 463 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 PCBP4P57723 403 aaKnown RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 XIAPP98170 497 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 HHEXQ03014 270 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 CCDC173Q0VFZ6 552 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 ITGA9Q13797 1035 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 SIX1Q15475 284 aaPredicted RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 CLPPQ16740 277 aaPredicted RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 INSCQ1MX18 579 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 LDLRAP1Q5SW96 308 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 GPRC6AQ5T6X5 926 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 CLEC14AQ86T13 490 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 RASGEF1AQ8N9B8 481 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 ZNF398Q8TD17 642 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 C1orf54Q8WWF1 131 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 THSD1Q9NS62 852 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 SMOXQ9NWM0 555 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 KCNK4Q9NYG8 393 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 FEZ2Q9UHY8 353 aaPredicted RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 DNAJC16Q9Y2G8 782 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 LOXL2Q9Y4K0 774 aa21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 DSPP15924 2871 aaKnown RBP21.99■■□□□ 1.11
GTF2F1-204ENST00000594965 KIR2DS5A0A0G2JLQ3 304 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 A0A0G2JNG1 304 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 KIR2DS3K7RE56 304 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 AGRPO00253 132 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 RRP8O43159 456 aaKnown RBP21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 LDB2O43679 373 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 PRAMEF1O95521 474 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 MLLT3P42568 568 aaPredicted RBP21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 ABCG1P45844 678 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 ZNF140P52738 457 aaPredicted RBP21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 KIR2DS5Q14953 304 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 C16orf72Q14CZ0 275 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 P3H1Q32P28 736 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 LRRC69Q6ZNQ3 347 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 SLC9B2Q86UD5 537 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 TAB3Q8N5C8 712 aaPredicted RBP21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 ZNF248Q8NDW4 579 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 ALS2CR12Q96Q35 445 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 SLC38A3Q99624 504 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 TLR10Q9BXR5 811 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 FRMD8P1Q9BZ68 369 aaPredicted RBP21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 OSGEPL1Q9H4B0 414 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 LRRC40Q9H9A6 602 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 PPP2R2CQ9Y2T4 447 aa21.98■■□□□ 1.11
GTF2F1-204ENST00000594965 IGHV5-10-1A0A0J9YXX1 117 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 OR5K4A6NMS3 321 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 ZW10O43264 779 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 SRP72O76094 671 aaKnown RBP21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 CRTAMO95727 393 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 ITGA2BP08514 1039 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 SLC2A4P14672 509 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 STIP1P31948 543 aaKnown RBP21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 UBE2IP63279 158 aaKnown RBP21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 GTF2H3Q13889 308 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 PHF19Q5T6S3 580 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 MICALCLQ6ZW33 695 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 TRAPPC5Q8IUR0 188 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 SPACA3Q8IXA5 215 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 NAF1Q96HR8 494 aaKnown RBP21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 ASB8Q9H765 288 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 GRPEL1Q9HAV7 217 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 TMEM9Q9P0T7 183 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 ZNF624Q9P2J8 865 aaPredicted RBP21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 CPNE7Q9UBL6 633 aa21.97■■□□□ 1.11
GTF2F1-204ENST00000594965 AGAP14A8MT82 685 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 AP2A1O95782 977 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 ETS1P14921 441 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 BRAFP15056 766 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 TPH1P17752 444 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 ITIH1P19827 911 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 ETV5P41161 510 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 LIMK2P53671 638 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 GPLD1P80108 840 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 TMPRSS15P98073 1019 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 NFATC2Q13469 925 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 TMEM220Q6QAJ8 160 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 PRUNE1Q86TP1 453 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 RCBTB1Q8NDN9 531 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 CCDC97Q96F63 343 aaPredicted RBP21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 CCDC74BQ96LY2 380 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 C19orf43Q9BQ61 176 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 PISDQ9UG56 409 aa21.96■■□□□ 1.11
GTF2F1-204ENST00000594965 CCL22O00626 93 aa21.95■■□□□ 1.1
GTF2F1-204ENST00000594965 PSMD3O43242 534 aa21.95■■□□□ 1.1
GTF2F1-204ENST00000594965 XRCC1P18887 633 aaPredicted RBP21.95■■□□□ 1.1
GTF2F1-204ENST00000594965 MPSTP25325 297 aa21.95■■□□□ 1.1
GTF2F1-204ENST00000594965 RPL10P27635 214 aaKnown RBP21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms