RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 BOD1L1Q8NFC6 3051 aa17.36■□□□□ 0.37
SHKBP1-203ENST00000594298 SDK2Q58EX2 2172 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 ZNF891A8MT65 544 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 INPP4BO15327 924 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 STK10O94804 968 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 EML2O95834 649 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 PRLP01236 227 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 PTPN3P26045 913 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 POLE2P56282 527 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 MC2RQ01718 297 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 HHEXQ03014 270 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 KCNAB2Q13303 367 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 NOMO1Q15155 1222 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 RPS6KA1Q15418 735 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC14A2Q15849 920 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 CCDC70Q6NSX1 233 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 IYDQ6PHW0 289 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 ZNF761Q86XN6 746 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 TRIM58Q8NG06 486 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 ACTL9Q8TC94 416 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 SH3KBP1Q96B97 665 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 RTP4Q96DX8 246 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 IMP4Q96G21 291 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 SLC45A3Q96JT2 553 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 ZPBPQ9BS86 351 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 RMI1Q9H9A7 625 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 GLOD4Q9HC38 313 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 KLHL8Q9P2G9 620 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 TRHDEQ9UKU6 1024 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 CNOT6Q9ULM6 557 aaKnown RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 CHKBQ9Y259 395 aa17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 PCYT1BQ9Y5K3 369 aaPredicted RBP17.35■□□□□ 0.37
SHKBP1-203ENST00000594298 TRBV23OR9-2A0A075B6M9 112 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 A6NCN8 305 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 MAP4P27816 1152 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 TNNT3P45378 269 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 CCR10P46092 362 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 EPHA4P54764 986 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 EIF3EP60228 445 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 OTUD4Q01804 1114 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 HENMT1Q5T8I9 393 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 SEL1L2Q5TEA6 688 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 B4GALNT4Q76KP1 1039 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 PID1Q7Z2X4 250 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 NLGN4XQ8N0W4 816 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 NLGN4YQ8NFZ3 816 aaPredicted RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 WDR24Q96S15 920 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 HERPUD2Q9BSE4 406 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 CEP41Q9BYV8 373 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 ZMYND15Q9H091 742 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 STN1Q9H668 368 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 FBXO8Q9NRD0 319 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 TBC1D29Q9UFV1 150 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 ZNHIT2Q9UHR6 403 aa17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 OAS3Q9Y6K5 1087 aaKnown RBP17.34■□□□□ 0.37
SHKBP1-203ENST00000594298 RGSL1A5PLK6 1076 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 ZSCAN12O43309 604 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 CLDN7O95471 211 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 ASMTLO95671 621 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 MMP2P08253 660 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 RBP3P10745 1247 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 SLC2A4P14672 509 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 SPINT3P49223 89 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 TLE1Q04724 770 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 WASHC5Q12768 1159 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 MEI1Q5TIA1 1274 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 DARS2Q6PI48 645 aaKnown RBP17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 CEACAM20Q6UY09 585 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 CHST15Q7LFX5 561 aaPredicted RBP17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 LYSMD3Q7Z3D4 306 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 SLC9B2Q86UD5 537 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 LPCAT1Q8NF37 534 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 EFHD1Q9BUP0 239 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 EPB41L1Q9H4G0 881 aa17.33■□□□□ 0.36
SHKBP1-203ENST00000594298 KIR2DS5A0A0G2JLQ3 304 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 A0A0G2JNG1 304 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 FADS2P1A8MWK0 482 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 KIR2DS3K7RE56 304 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 ATP1A1P05023 1023 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 F3P13726 295 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 RBL1P28749 1068 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 CDK18Q07002 472 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 ABHD18Q0P651 414 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 NFATC2Q13469 925 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 KIR2DS5Q14953 304 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 ITPRIPL1Q6GPH6 555 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 AADACL2Q6P093 401 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 AVL9Q8NBF6 648 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 NCSTNQ92542 709 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 KIAA1143Q96AT1 154 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 SRPK1Q96SB4 655 aaKnown RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 MLPHQ9BV36 600 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 FAM83DQ9H4H8 585 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 GPN2Q9H9Y4 310 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 FAM153AQ9UHL3 310 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 PRKAB1Q9Y478 270 aa17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 TMEM184BQ9Y519 407 aaPredicted RBP17.32■□□□□ 0.36
SHKBP1-203ENST00000594298 C1orf232A0A0U1RR37 186 aa17.31■□□□□ 0.36
SHKBP1-203ENST00000594298 OR5K4A6NMS3 321 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms