RNA–Protein interactions for RNA: ENST00000576713.6

NPLOC4-219, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-219ENST00000576713 NAXDQ8IW45 347 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 SFTPA2Q8IWL1 248 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 OR52K1Q8NGK4 314 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 OR13C4Q8NGS5 318 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 BAHD1Q8TBE0 780 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 NAT14Q8WUY8 206 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 MAGOHBQ96A72 148 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 AP2M1Q96CW1 435 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 COX14Q96I36 57 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 FSD1LQ9BXM9 530 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 FRMD8Q9BZ67 464 aaPredicted RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CLPBQ9H078 707 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 DDX47Q9H0S4 455 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 WDR26Q9H7D7 661 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 ARNT2Q9HBZ2 717 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 DNAJC28Q9NX36 388 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 IL17CQ9P0M4 197 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 PCOLCE2Q9UKZ9 415 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 ZKSCAN5Q9Y2L8 839 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 TMEM98Q9Y2Y6 226 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 AAR2Q9Y312 384 aaKnown RBP9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 PLEKHM1Q9Y4G2 1056 aa9.4□□□□□ -0.9
NPLOC4-219ENST00000576713 CELSR3Q9NYQ7 3312 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 SPAARA0A1B0GVQ0 90 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CCDC78A2IDD5 438 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GOLGA6CA6NDK9 693 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GOLGA6BA6NDN3 693 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 TRIM38O00635 465 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 LDB2O43679 373 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PCDHGA12O60330 932 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PHF2O75151 1096 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PIAS2O75928 621 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 TMEM63AO94886 807 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 SUN1O94901 812 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CSF2P04141 144 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF883P0CG24 379 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GOLGA6DP0CG33 693 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PRSS56P0CW18 603 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 TCP1P17987 556 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 NME2P22392 152 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 HMGCLP35914 325 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CCT8P50990 548 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF140P52738 457 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 KIAA1024LP59773 190 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ETF1P62495 437 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 YPEL5P62699 121 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 MRPS25P82663 173 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PPM1JQ5JR12 505 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CERCAMQ5T4B2 595 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 RAET1GQ6H3X3 334 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CCDC137Q6PK04 289 aaKnown RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 IGF2-ASQ6U949 168 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ENPP7Q6UWV6 458 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF765Q7L2R6 523 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GLT6D1Q7Z4J2 308 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 PHACTR4Q8IZ21 702 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF548Q8NEK5 533 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 CCL4L1Q8NHW4 92 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 STK35Q8TDR2 534 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF778Q96MU6 729 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 LRRC61Q9BV99 259 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 C1QTNF7Q9BXJ2 289 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GPR63Q9BZJ6 419 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 FAM83DQ9H4H8 585 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 SUDS3Q9H7L9 328 aaPredicted RBP9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 IL26Q9NPH9 171 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 GOLGA6AQ9NYA3 693 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 SAR1BQ9Y6B6 198 aa9.39□□□□□ -0.91
NPLOC4-219ENST00000576713 ZNF106Q9H2Y7 1883 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 ZFHX4Q86UP3 3567 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 LAMA5O15230 3695 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 LY6G6EA0A0G2JKS1 128 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 CTAGE9A4FU28 777 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 FFAR2O15552 330 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A9O60656 530 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 MTX2O75431 263 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 KCNK5O95279 499 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 KRT14P02533 472 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 MYCLP1P12525 358 aaPredicted RBP9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 TSHRP16473 764 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A6P19224 532 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A1P22309 533 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A4P22310 534 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 ARNTP27540 789 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A3P35503 534 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 UGT1A5P35504 534 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 GPR1P46091 355 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 HK3P52790 923 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 THOP1P52888 689 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 SRP54P61011 504 aaKnown RBP9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 CRADDP78560 199 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 TMPRSS15P98073 1019 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 XIAPP98170 497 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 PRPSAP1Q14558 356 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 POU6F1Q14863 301 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 CHRNA6Q15825 494 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 ATP13A5Q4VNC0 1218 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 CCDC38Q502W7 563 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 DOK6Q6PKX4 331 aa9.38□□□□□ -0.91
NPLOC4-219ENST00000576713 FAM151BQ6UXP7 276 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms