RNA–Protein interactions for RNA: ENST00000556564.5

PTPN21-208, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-208ENST00000556564 PACSIN3Q9UKS6 424 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 C15orf38-AP3S2A0A0A6YYH1 394 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 HSMCR30P0CW71 290 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 CCR3P51677 355 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ARPINQ7Z6K5 226 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 C14orf80Q86SX3 495 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 ALYREFQ86V81 257 aaKnown RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 BHLHE22Q8NFJ8 381 aaPredicted RBP17.19■□□□□ 0.34
PTPN21-208ENST00000556564 TSSK3Q96PN8 268 aa17.19■□□□□ 0.34
PTPN21-208ENST00000556564 PSMC3P17980 439 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 CRHR1P34998 444 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 RXRGP48443 463 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 HADHBP55084 474 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 CHRNA6Q15825 494 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 INTS11Q5TA45 600 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 ANXA8L1Q5VT79 327 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FAM20CQ8IXL6 584 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF276Q8N554 614 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 BDH2Q9BUT1 245 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 BRAT1Q6PJG6 821 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 C12orf65Q9H3J6 166 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 NSUN3Q9H649 340 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 MRPS30Q9NP92 439 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 TMEM98Q9Y2Y6 226 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 A8MU76 341 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 UPK3BL1B0FP48 263 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 UPK3BL2E5RIL1 263 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FAM20BO75063 409 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 COX4I1P13073 169 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FGFR3P22607 806 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 S100A5P33763 92 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 BUD31P41223 144 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 SLC9A5Q14940 896 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 USP39Q53GS9 565 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 HAPLN2Q9GZV7 340 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 TAF1P21675 1872 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FEN1P39748 380 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 MLLT6P55198 1093 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 C1QTNF8P60827 252 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 WDR5P61964 334 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 SRSF11Q05519 484 aaKnown RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FSTL4Q6MZW2 842 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 CYB5D1Q6P9G0 228 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 TRABD2AQ86V40 505 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 ADGRG2Q8IZP9 1017 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 Q8N9G6 341 aaPredicted RBP17.18■□□□□ 0.34
PTPN21-208ENST00000556564 FAM46DQ8NEK8 389 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 SGIP1Q9BQI5 828 aa17.18■□□□□ 0.34
PTPN21-208ENST00000556564 SIN3BO75182 1162 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 LIMK2P53671 638 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 PHF19Q5T6S3 580 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 MICU2Q8IYU8 434 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 ANKRD49Q8WVL7 239 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 EXOSC8Q96B26 276 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 MRPL48Q96GC5 212 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 HDAC3O15379 428 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 LDLRP01130 860 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 PTGIRP43119 386 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 LAPTM5Q13571 262 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 PDK4Q16654 411 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 CPTPQ5TA50 214 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 CLEC6AQ6EIG7 209 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 STK32CQ86UX6 486 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SCAIQ8N9R8 606 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 FBXO15Q8NCQ5 510 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 EIF2B3Q9NR50 452 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 CORO2BQ9UQ03 480 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SLC35G6P0C7Q6 338 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 NRG1Q02297 640 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SLC25A11Q02978 314 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 C2orf80Q0P641 193 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 TAF13Q15543 124 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 ATP13A5Q4VNC0 1218 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 MREGQ8N565 214 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 TMEM248Q9NWD8 314 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SLC17A6Q9P2U8 582 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 C8GP07360 202 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 BPGMP07738 259 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 RAD23AP54725 363 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SLC25A3Q00325 362 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 TSNQ15631 228 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 PLEKHM3Q6ZWE6 761 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 DPP10Q8N608 796 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 OR6Y1Q8NGX8 325 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 PNPT1Q8TCS8 783 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 LRTM1Q9HBL6 345 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 RBM47A0AV96 593 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 ESR1P03372 595 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 ZNF155Q12901 538 aaPredicted RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 SLC1A5Q15758 541 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 LRRC66Q68CR7 880 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 TYW3Q6IPR3 259 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 ESAMQ96AP7 390 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 EBPLQ9BY08 206 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 C3orf14Q9HBI5 128 aa17.17■□□□□ 0.34
PTPN21-208ENST00000556564 EIF2B4Q9UI10 523 aaKnown RBP17.17■□□□□ 0.34
PTPN21-208ENST00000556564 IGKV6-21A0A0C4DH24 114 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ADH1BP00325 375 aa17.16■□□□□ 0.34
PTPN21-208ENST00000556564 ITPKBP27987 946 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms