RNA–Protein interactions for RNA: ENST00000543881.5

GABPB1-206, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 2 BASIC

Gene GABPB1, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-206ENST00000543881 A8MU76 341 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 AKR1B15C9JRZ8 316 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 AURKAO14965 403 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PPP1R12AO14974 1030 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 GRID2O43424 1007 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 NUAK1O60285 661 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 AGFG2O95081 481 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SLC4A1P02730 911 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ZFXP17010 805 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TCN2P20062 427 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PTPN3P26045 913 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CD68P34810 354 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SLC1A1P43005 524 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 GPLD1P80108 840 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 HHEXQ03014 270 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CDK18Q07002 472 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ABHD18Q0P651 414 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 WASHC5Q12768 1159 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PRKD1Q15139 912 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TEX44Q53QW1 395 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ADGRG6Q86SQ4 1221 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TEX19Q8NA77 164 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 AHCYL2Q96HN2 611 aaKnown RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SLC38A3Q99624 504 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SPATA16Q9BXB7 569 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CARD9Q9H257 536 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 RMI1Q9H9A7 625 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 GLOD4Q9HC38 313 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 MAGEE1Q9HCI5 957 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 DDX56Q9NY93 547 aaKnown RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 UBP1Q9NZI7 540 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PDP2Q9P2J9 529 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 INTUQ9ULD6 942 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TFR2Q9UP52 801 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ZNF711Q9Y462 761 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 K7EM74 188 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SNX2O60749 519 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PMPCBO75439 489 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 STK17BO94768 372 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 BPIP17213 487 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 UQCRFS1P47985 274 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PPM1FP49593 454 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 DCDC1P59894 354 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 MC2RQ01718 297 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 NFATC2Q13469 925 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 NOMO1Q15155 1222 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SLC14A2Q15849 920 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 KHDC1Q4VXA5 237 aaKnown RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CRTC2Q53ET0 693 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SNAP47Q5SQN1 464 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 KAZNQ674X7 775 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CEACAM20Q6UY09 585 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 CNGA4Q8IV77 575 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TRAM1L1Q8N609 369 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TC2NQ8N9U0 490 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TEKT5Q96M29 485 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ZPBPQ9BS86 351 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 OR2AG1Q9H205 316 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TRIM39Q9HCM9 518 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SARS2Q9NP81 518 aaKnown RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 PRDM8Q9NQV8 689 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SCHIP1Q9P0W5 487 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 NFKBIL1Q9UBC1 381 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SLC23A2Q9UGH3 650 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TMPRSS11EQ9UL52 423 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 TMEM184BQ9Y519 407 aaPredicted RBP11.7□□□□□ -0.54
GABPB1-206ENST00000543881 KCTD3Q9Y597 815 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 ALG6Q9Y672 507 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 KCNMB2Q9Y691 235 aa11.7□□□□□ -0.54
GABPB1-206ENST00000543881 SPENQ96T58 3664 aaKnown RBP11.69□□□□□ -0.54
GABPB1-206ENST00000543881 UNC79Q9P2D8 2635 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 A0A0A6YYK5 440 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-206ENST00000543881 MKRN2OSH3BPM6 223 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 CHUKO15111 745 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 SPOPO43791 374 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 CST8O60676 142 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 VPS4BO75351 444 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 MTX2O75431 263 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 SLC25A14O95258 325 aaPredicted RBP11.69□□□□□ -0.54
GABPB1-206ENST00000543881 NDST3O95803 873 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 F3P13726 295 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 MARCKSL1P49006 195 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 NR2C2P49116 596 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 HADHBP55084 474 aaKnown RBP11.69□□□□□ -0.54
GABPB1-206ENST00000543881 ZNF569Q5MCW4 686 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 FHL5Q5TD97 284 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 TCTN3Q6NUS6 607 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 KDELC1Q6UW63 502 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 SPOCD1Q6ZMY3 1216 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 OR10G6Q8NH81 332 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 GLYATL1Q969I3 302 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 ZSCAN5AQ9BUG6 496 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 GPR63Q9BZJ6 419 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 TRIT1Q9H3H1 467 aaKnown RBP11.69□□□□□ -0.54
GABPB1-206ENST00000543881 APMAPQ9HDC9 416 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 FBXO8Q9NRD0 319 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 KLC4Q9NSK0 619 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 VPS4AQ9UN37 437 aa11.69□□□□□ -0.54
GABPB1-206ENST00000543881 MRPS18BQ9Y676 258 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 162.6 ms