RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 DHX40Q8IX18 779 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 HACE1Q8IYU2 909 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 ZBED8Q8IZ13 594 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 GPD1LQ8N335 351 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 GBGT1Q8N5D6 347 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PAF1Q8N7H5 531 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 C11orf65Q8NCR3 313 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 C17orf47Q8NEP4 570 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 OR2T12Q8NG77 320 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SPPL3Q8TCT6 385 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 NOC3LQ8WTT2 800 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 ZFAND2BQ8WV99 257 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SLC44A1Q8WWI5 657 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 RUBCNQ92622 972 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 APBB2Q92870 758 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SLC41A2Q96JW4 573 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SGCZQ96LD1 299 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 GAL3ST4Q96RP7 486 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 USP28Q96RU2 1077 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 KRT12Q99456 494 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 WWTR1Q9GZV5 400 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 STN1Q9H668 368 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 SEBOXQ9HB31 216 aaPredicted RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 NOD2Q9HC29 1040 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 SNTG1Q9NSN8 517 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 ACSS1Q9NUB1 689 aaPredicted RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 ANAPC11Q9NYG5 84 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 ERAP1Q9NZ08 941 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 KIAA1456Q9P272 454 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PEMTQ9UBM1 199 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 B4GALT7Q9UBV7 327 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 CDC23Q9UJX2 597 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 PADI3Q9ULW8 664 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 ZNF256Q9Y2P7 627 aaPredicted RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 GDAQ9Y2T3 454 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 TDRD15B5MCY1 1934 aaKnown RBP0.67□□□□□ -2.3
COPB1-212ENST00000534771 CROCCQ5TZA2 2017 aa0.67□□□□□ -2.3
COPB1-212ENST00000534771 IGLV9-49A0A0B4J1Y8 123 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IGHV4-61A0A0C4DH41 118 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 FAM90A26D6RGX4 464 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IFNL4K9M1U5 179 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 NBNO60934 754 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 KHDRBS3O75525 346 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 CDC123O75794 336 aaPredicted RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 FTCDO95954 541 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IGHV4-59P01825 116 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 GALTP07902 379 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 NBPF7P0C2Y1 421 aaPredicted RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 ZSCAN5DPP0CG00 497 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IRF1P10914 325 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 UGT1A1P22309 533 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 PDIA3P30101 505 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 UBA7P41226 1012 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 APOBEC1P41238 236 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 CTSCP53634 463 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 PRKAA2P54646 552 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 GSDMDP57764 484 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 LYZP61626 148 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 GALNT1Q10472 559 aaPredicted RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 FASTKD3Q14CZ7 662 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 PNLIPRP3Q17RR3 467 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 NDUFAF5Q5TEU4 345 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IL27RAQ6UWB1 636 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 VITQ6UXI7 678 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 SLC16A9Q7RTY1 509 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 ADGRG6Q86SQ4 1221 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 SRLQ86TD4 932 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 ISCA2Q86U28 154 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 TDRPQ86YL5 185 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 PLD3Q8IV08 490 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 TMEM57Q8N5G2 664 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 TNIP2Q8NFZ5 429 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 UTP15Q8TED0 518 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 ARHGAP45Q92619 1136 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 SEMA4DQ92854 862 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 ARSGQ96EG1 525 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 B3GALT6Q96L58 329 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 NSMCE3Q96MG7 304 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 FUCA2Q9BTY2 467 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 IFIH1Q9BYX4 1025 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 PITPNM3Q9BZ71 974 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 TWSG1Q9GZX9 223 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 USP44Q9H0E7 712 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 TAOK3Q9H2K8 898 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 SAYSD1Q9NPB0 183 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 INTS9Q9NV88 658 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 RNF186Q9NXI6 227 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 KLHL9Q9P2J3 617 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 SRP68Q9UHB9 627 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 DNAJC16Q9Y2G8 782 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 LAS1LQ9Y4W2 734 aaKnown RBP0.66□□□□□ -2.3
COPB1-212ENST00000534771 YIPF1Q9Y548 306 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 CEPT1Q9Y6K0 416 aa0.66□□□□□ -2.3
COPB1-212ENST00000534771 UTYO14607 1347 aa0.65□□□□□ -2.3
COPB1-212ENST00000534771 A0A087WV62 115 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 A0A1W2PP11 408 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ACOD1A6NK06 481 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 ASB14A6NK59 587 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 OR6C76A6NM76 312 aa0.65□□□□□ -2.31
COPB1-212ENST00000534771 SRRM4A7MD48 611 aaKnown RBP0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms