RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 C19orf84I3L1E1 186 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 FGF10O15520 208 aaPredicted RBP13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 GRID2O43424 1007 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 CYP11B1P15538 503 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 CTPS1P17812 591 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 OTX2P32243 289 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 ART1P52961 327 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 SOX8P57073 446 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 KCNK10P57789 538 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 OTUD4Q01804 1114 aaKnown RBP13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 PTSQ03393 145 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 TRAF2Q12933 501 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 RFTN1Q14699 578 aaPredicted RBP13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 GPR19Q15760 415 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 HIF1AQ16665 826 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 ARHGAP36Q6ZRI8 547 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 KMT5CQ86Y97 462 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 FAM71AQ8IYT1 594 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 D2HGDHQ8N465 521 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 MSANTD4Q8NCY6 345 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 OR8K5Q8NH50 307 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 PPP4R1Q8TF05 950 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 FER1L6-AS2Q96M78 137 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 IP6K3Q96PC2 410 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 MAP3K3Q99759 626 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 OSGEPL1Q9H4B0 414 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 MCCC2Q9HCC0 563 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 KLC4Q9NSK0 619 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 POT1Q9NUX5 634 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 KIAA1468Q9P260 1216 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 PPIL1Q9Y3C6 166 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 CACNA1CQ13936 2221 aa13.59□□□□□ -0.23
NKX3-1-202ENST00000523261 FAM221AA4D161 298 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 MASP2O00187 686 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 NUAK1O60285 661 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 LSM8O95777 96 aaKnown RBP13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 GNA14O95837 355 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 RENBPP51606 427 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 TLE4Q04727 773 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 CDC16Q13042 620 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 NCF4Q15080 339 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 RPTNQ6XPR3 784 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 USP45Q70EL2 814 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 CPA5Q8WXQ8 436 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 CPT1BQ92523 772 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 SPATA32Q96LK8 384 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 SMIM14Q96QK8 99 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 CARD9Q9H257 536 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 SP110Q9HB58 689 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 OLAHQ9NV23 265 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 NEU2Q9Y3R4 380 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 ADGRG1Q9Y653 693 aa13.58□□□□□ -0.24
NKX3-1-202ENST00000523261 KLF7O75840 302 aaPredicted RBP13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 PGLSO95336 258 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 BRAFP15056 766 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 ARL4DP49703 201 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 STC1P52823 247 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 BPIFB4P59827 614 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 NOMO3P69849 1222 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 HSD11B2P80365 405 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 IL10RBQ08334 325 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 SLC10A7Q0GE19 358 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 STIM1Q13586 685 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 TAF3Q5VWG9 929 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 B3GNTL1Q67FW5 361 aaPredicted RBP13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 FCRL6Q6DN72 434 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 FAM180AQ6UWF9 173 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 ARHGAP12Q8IWW6 846 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 RBM12BQ8IXT5 1001 aaKnown RBP13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 SYTL1Q8IYJ3 562 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 COG1Q8WTW3 980 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 PIH1D2Q8WWB5 315 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 CCDC34Q96HJ3 373 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 NUDCD1Q96RS6 583 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 WDR24Q96S15 920 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 NOD2Q9HC29 1040 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 SIX2Q9NPC8 291 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 PCMTD2Q9NV79 361 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 SLC23A2Q9UGH3 650 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 DNAJC12Q9UKB3 198 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 PCM1Q15154 2024 aa13.57□□□□□ -0.24
NKX3-1-202ENST00000523261 PRRC2AP48634 2157 aaKnown RBP13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 DOCK10Q96BY6 2186 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 TLCD2A6NGC4 264 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 OR52A4PA6NMU1 304 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 PDZK1P1A8MUH7 402 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 FADS2P1A8MWK0 482 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 CCL21O00585 134 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 PCDH17O14917 1159 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 IGHEP01854 428 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 ZNF30P17039 623 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 PON1P27169 355 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 KIR3DL1P43629 444 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 TDGF1P3P51864 188 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 ABRQ12979 859 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 PKP1Q13835 747 aa13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 LBRQ14739 615 aaKnown RBP13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 ZNF169Q14929 603 aaPredicted RBP13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 SEPT7Q16181 437 aaKnown RBP13.56□□□□□ -0.24
NKX3-1-202ENST00000523261 PTCHD3Q3KNS1 767 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms