RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 BET1O15155 118 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ALOX15BO15296 676 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 BCAR3O75815 825 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 UFL1O94874 794 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CSPG5O95196 566 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NTSR2O95665 410 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 APBB3O95704 486 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ASS1P00966 412 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 IFNA14P01570 189 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ABCB1P08183 1280 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 GLULP15104 373 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NQO1P15559 274 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ITGAXP20702 1163 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 GNA11P29992 359 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 GALNSP34059 522 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PTGER1P34995 402 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ADD2P35612 726 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 LONP1P36776 959 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 MDH1P40925 334 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPM1FP49593 454 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDK7P50613 346 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 STX17P56962 302 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 VSNL1P62760 191 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PRKCEQ02156 737 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 TNFAIP2Q03169 654 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 AIMP1Q12904 312 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PPP2R5CQ13362 524 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ARHGAP15Q53QZ3 475 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 HERC4Q5GLZ8 1057 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 TTC39AQ5SRH9 613 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 FAM90A2PQ658T7 463 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NIPAL1Q6NVV3 410 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CFAP161Q6P656 301 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 LRRC8BQ6P9F7 803 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 EMBQ6PCB8 327 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SHQ1Q6PI26 577 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 KDELC1Q6UW63 502 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 IDO2Q6ZQW0 420 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CYP4V2Q6ZWL3 525 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 MARK2Q7KZI7 788 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 FASTKD5Q7L8L6 764 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 TRPM8Q7Z2W7 1104 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CLVS1Q8IUQ0 354 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 MMAAQ8IVH4 418 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NKAIN4Q8IVV8 208 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PM20D2Q8IYS1 436 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 OR8H2Q8N162 312 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 TSPYL6Q8N831 410 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF527Q8NB42 609 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATAD1Q8NBU5 361 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CDC26Q8NHZ8 85 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PYROXD1Q8WU10 500 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC12Q8WUD4 166 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NAT14Q8WUY8 206 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZNF606Q8WXB4 792 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 DDB2Q92466 427 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCT6BQ92526 530 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 AKAP1Q92667 903 aaKnown RBP eCLIP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 RSC1A1Q92681 617 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NCLNQ969V3 563 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCDC127Q96BQ5 260 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SGF29Q96ES7 293 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CNDP2Q96KP4 475 aaKnown RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CEP170P1Q96L14 293 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SH2D3AQ9BRG2 576 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 TMEM79Q9BSE2 394 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 KIFC3Q9BVG8 833 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 AP1M1Q9BXS5 423 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 EDEM3Q9BZQ6 932 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCSER1Q9C0I3 900 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 C6orf62Q9GZU0 229 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SNX25Q9H3E2 840 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 UCK1Q9HA47 277 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 RNPEPL1Q9HAU8 725 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PLGRKTQ9HBL7 147 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 VPS45Q9NRW7 570 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 KCNN3Q9UGI6 736 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC7A8Q9UHI5 535 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 AMACRQ9UHK6 382 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 SLC8A2Q9UPR5 921 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 AGTPBP1Q9UPW5 1226 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 IFT52Q9Y366 437 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 PCDHGB2Q9Y5G2 931 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 STON1Q9Y6Q2 735 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 DISP2A7MBM2 1401 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 RGS12O14924 1447 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 NHSL1Q5SYE7 1610 aa4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 COL22A1Q8NFW1 1626 aaPredicted RBP4.68□□□□□ -1.66
HMGB3P13-201ENST00000511263 XIRP1Q702N8 1843 aaKnown RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ROBO1Q9Y6N7 1651 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ATRNO75882 1429 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CTAGE9A4FU28 777 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 C3orf70A6NLC5 250 aaPredicted RBP4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 CCT8L1PA6NM43 557 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 PRSS47A8MTI9 375 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 K7ENM7 598 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 MAPK13O15264 365 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 INPPL1O15357 1258 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 HDAC3O15379 428 aa4.67□□□□□ -1.66
HMGB3P13-201ENST00000511263 ZBTB43O43298 467 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms