RNA–Protein interactions for RNA: ENST00000482171.5

SMPD4-218, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 4,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-218ENST00000482171 TSEN34Q9BSV6 310 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 WRAP53Q9BUR4 548 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ITGB1BP2Q9UKP3 347 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 FADS3Q9Y5Q0 445 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 FAM189A1O60320 539 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 SIX3O95343 332 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 OAS1P00973 400 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 GNRH1P01148 92 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 CKMT2P17540 419 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 GKP32189 559 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 HPCAP84074 193 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 TIGD2Q4W5G0 525 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 FAM98BQ52LJ0 330 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 FRMD7Q6ZUT3 714 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 UBR7Q8N806 425 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 CLHC1Q8NHS4 586 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 PTCD2Q8WV60 388 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ARNTL2Q8WYA1 636 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 OTULINQ96BN8 352 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 IGSF21Q96ID5 467 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 YIPF2Q9BWQ6 316 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 CEP44Q9C0F1 390 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 POLR3BQ9NW08 1133 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 LIMD1Q9UGP4 676 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 TEKT2Q9UIF3 430 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ANAPC2Q9UJX6 822 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 COQ6Q9Y2Z9 468 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 DGKBQ9Y6T7 804 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 COL24A1Q17RW2 1714 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 POLR2AP24928 1970 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 DCLK1O15075 740 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 EFCAB14O75071 495 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 GSNP06396 782 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ALOX15P16050 662 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ITPKAP23677 461 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 IFNA8P32881 189 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ATP6V0D1P61421 351 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ACSM2AQ08AH3 577 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ADGRE1Q14246 886 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ACSM2BQ68CK6 577 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 CES5AQ6NT32 575 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 KIAA0408Q6ZU52 694 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 CBR4Q8N4T8 237 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 C2orf73Q8N5S3 287 aaPredicted RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 SIDT2Q8NBJ9 832 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 PSMA8Q8TAA3 256 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 PLD4Q96BZ4 506 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ZCCHC2Q9C0B9 1178 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 ATG10Q9H0Y0 220 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 SLC28A3Q9HAS3 691 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 DEC1Q9P2X7 70 aa11.22□□□□□ -0.61
SMPD4-218ENST00000482171 TNPO3Q9Y5L0 923 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.22□□□□□ -0.61
SMPD4-218ENST00000482171 TRIM43BA6NCK2 446 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 H3BMM5 538 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 HAS3O00219 553 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 SLC7A4O43246 635 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 LRATO95237 230 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 ITGBL1O95965 494 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-218ENST00000482171 ACADMP11310 421 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 XRCC1P18887 633 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-218ENST00000482171 THOP1P52888 689 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 DEPDC1Q5TB30 811 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 GALNT18Q6P9A2 607 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 CNKSR3Q6P9H4 555 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 CENPLQ8N0S6 344 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-218ENST00000482171 PLD6Q8N2A8 252 aaKnown RBP11.21□□□□□ -0.61
SMPD4-218ENST00000482171 SKA1Q96BD8 255 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 ASB2Q96Q27 587 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 STX16-NPEPL1H3BU86 382 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 GRM6O15303 877 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 HSPA7P48741 367 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 BROXQ5VW32 411 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 CGB2Q6NT52 195 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 PAQR3Q6TCH7 311 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 ZYG11AQ6WRX3 759 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 ZNF621Q6ZSS3 439 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 DSG4Q86SJ6 1040 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 SERPINA9Q86WD7 417 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 TBC1D19Q8N5T2 526 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 GPR156Q8NFN8 814 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 CDKN2AIPNLQ96HQ2 116 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 KLHL32Q96NJ5 620 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 FCRL3Q96P31 734 aaPredicted RBP11.21□□□□□ -0.61
SMPD4-218ENST00000482171 PCDHAC1Q9H158 963 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.61
SMPD4-218ENST00000482171 TMEM233B4DJY2 109 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 AGRPO00253 132 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 MATN2O00339 956 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 SCAMP1O15126 338 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 INPPL1O15357 1258 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 TPD52L2O43399 206 aaKnown RBP11.21□□□□□ -0.62
SMPD4-218ENST00000482171 CES1P23141 567 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 NRG1Q02297 640 aaPredicted RBP11.21□□□□□ -0.62
SMPD4-218ENST00000482171 SLC18A2Q05940 514 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 DGUOKQ16854 277 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 AP5B1Q2VPB7 878 aa11.21□□□□□ -0.62
SMPD4-218ENST00000482171 LSM12Q3MHD2 195 aaKnown RBP11.21□□□□□ -0.62
SMPD4-218ENST00000482171 FAM124AQ86V42 546 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms