RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 PRPSAP2O60256 369 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 EBLN1P0CF75 366 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 TCF4P15884 667 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF135P52742 658 aaPredicted RBP16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 CDH6P55285 790 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 ITGA1P56199 1179 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 RPS15P62841 145 aaKnown RBP16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 GPS2Q13227 327 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 SEPT7Q16181 437 aaKnown RBP16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 PLA2G4EQ3MJ16 856 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 PLEKHN1Q494U1 663 aaPredicted RBP16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 LCN10Q6JVE6 187 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 IRGCQ6NXR0 463 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 TMCO3Q6UWJ1 677 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 POLNQ7Z5Q5 900 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 NDUFAF2Q8N183 169 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 BBS5Q8N3I7 341 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 ATPAF2Q8N5M1 289 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 EID2BQ96D98 161 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 ZDHHC12Q96GR4 267 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 SYT11Q9BT88 431 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 FAM83DQ9H4H8 585 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 PDE7BQ9NP56 450 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 POT1Q9NUX5 634 aa16.88■□□□□ 0.29
UBE2D4-209ENST00000454428 SPTBP11277 2137 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 SSU72P8A0A1W2PR75 194 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF185O15231 689 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 DESP17661 470 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 VARSP26640 1264 aaKnown RBP16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 GRNP28799 593 aaKnown RBP16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 EPHB1P54762 984 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 DSC2Q02487 901 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 DPYSL2Q16555 572 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ZRANB3Q5FWF4 1079 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 IZUMO3Q5VZ72 239 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 CRTC3Q6UUV7 619 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ABRAXAS1Q6UWZ7 409 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ADGRG6Q86SQ4 1221 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 HPS6Q86YV9 775 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF547Q8IVP9 402 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 TRIM48Q8IWZ4 208 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 RHOT1Q8IXI2 618 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 SIDT2Q8NBJ9 832 aaKnown RBP16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 TTC13Q8NBP0 860 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 CSPG4P5Q96PW8 444 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 SMAD5Q99717 465 aaKnown RBP16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 ZWILCHQ9H900 591 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 PARVAQ9NVD7 372 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 HIVEP1P15822 2718 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 NF1P21359 2839 aa16.87■□□□□ 0.29
UBE2D4-209ENST00000454428 C1orf232A0A0U1RR37 186 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 A6NL46 340 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 H3BRJ5 948 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 TMEM63AO94886 807 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 IL4RP24394 825 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 RPL10P27635 214 aaKnown RBP16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 KRT31Q15323 416 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 SYCP1Q15431 976 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 CRB2Q5IJ48 1285 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 SLC34A3Q8N130 599 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 CISD2Q8N5K1 135 aaKnown RBP16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 GLIS1Q8NBF1 620 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 ARRDC2Q8TBH0 407 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF514Q96K75 400 aaPredicted RBP16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 POLR1EQ9GZS1 481 aaKnown RBP16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 CHST8Q9H2A9 424 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 FGF21Q9NSA1 209 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 DNPEPQ9ULA0 475 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 DNAJC16Q9Y2G8 782 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 WDR37Q9Y2I8 494 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 TACC2O95359 2948 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 DCHS2Q6V1P9 2916 aa16.86■□□□□ 0.29
UBE2D4-209ENST00000454428 ANKUB1A6NFN9 424 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 PDZK1P1A8MUH7 402 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 ZNF7P17097 686 aaPredicted RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 DRG2P55039 364 aaKnown RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 ITKQ08881 620 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 NIPAL4Q0D2K0 466 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 INSCQ1MX18 579 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 SMTNL2Q2TAL5 461 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 KHDC1Q4VXA5 237 aaKnown RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 TDRD12Q587J7 1177 aaKnown RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 CYB5D1Q6P9G0 228 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 BPHLQ86WA6 291 aaPredicted RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 ZBTB2Q8N680 514 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 LPCAT1Q8NF37 534 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 NSMCE1Q8WV22 266 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 UBXN4Q92575 508 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 INPP5DQ92835 1189 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 MR1Q95460 341 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 MARVELD3Q96A59 401 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 BARD1Q99728 777 aaKnown RBP16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 TRIM39Q9HCM9 518 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 WASH6PQ9NQA3 447 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 NTNG1Q9Y2I2 539 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 ITPR3Q14573 2671 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 PIKFYVEQ9Y2I7 2098 aa16.85■□□□□ 0.29
UBE2D4-209ENST00000454428 RGSL1A5PLK6 1076 aa16.84■□□□□ 0.29
UBE2D4-209ENST00000454428 TMCO5BA8MYB1 307 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms