RNA–Protein interactions for RNA: ENST00000444511.6

VSX1-206, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 1,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-206ENST00000444511 SCHIP1Q9P0W5 487 aaPredicted RBP20.73■□□□□ 0.91
VSX1-206ENST00000444511 KLHL8Q9P2G9 620 aaPredicted RBP20.73■□□□□ 0.91
VSX1-206ENST00000444511 PILRAQ9UKJ1 303 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 ALG6Q9Y672 507 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 ZFC3H1O60293 1989 aaKnown RBP20.73■□□□□ 0.91
VSX1-206ENST00000444511 SDK2Q58EX2 2172 aa20.73■□□□□ 0.91
VSX1-206ENST00000444511 CD68P34810 354 aaPredicted RBP20.72■□□□□ 0.91
VSX1-206ENST00000444511 MAGEA1P43355 309 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 WNT3AP56704 352 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 GTF2H3Q13889 308 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 TFDP3Q5H9I0 405 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 TMEM26Q6ZUK4 368 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 ZC3H18Q86VM9 953 aaKnown RBP20.72■□□□□ 0.91
VSX1-206ENST00000444511 NLGN4XQ8N0W4 816 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 NLGN4YQ8NFZ3 816 aaPredicted RBP20.72■□□□□ 0.91
VSX1-206ENST00000444511 TRABDQ9H4I3 376 aa20.72■□□□□ 0.91
VSX1-206ENST00000444511 LOC285095A0A1B0GVY8 99 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 F5H423 210 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 UBXN7O94888 489 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 ZRANB2O95218 330 aaKnown RBP eCLIP20.71■□□□□ 0.91
VSX1-206ENST00000444511 TYRP1P17643 537 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 AMD1P17707 334 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 VCLP18206 1134 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 IDSP22304 550 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 HMGCLP35914 325 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 SLC19A1P41440 591 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 HADHBP55084 474 aaKnown RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 TBX2Q13207 712 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 NOMO1Q15155 1222 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 ATP13A5Q4VNC0 1218 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 KHDC1Q4VXA5 237 aaKnown RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 KDELC1Q6UW63 502 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 PID1Q7Z2X4 250 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 TRAPPC5Q8IUR0 188 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 CCDC50Q8IVM0 306 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 ZNF547Q8IVP9 402 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 SLC25A41Q8N5S1 370 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 KIAA1143Q96AT1 154 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 HAUS1Q96CS2 278 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 TTC25Q96NG3 672 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 GOLPH3Q9H4A6 298 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 GPN2Q9H9Y4 310 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 APMAPQ9HDC9 416 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 STARD5Q9NSY2 213 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 ZNF624Q9P2J8 865 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 TMPRSS11EQ9UL52 423 aa20.71■□□□□ 0.91
VSX1-206ENST00000444511 MN1Q10571 1320 aaPredicted RBP20.71■□□□□ 0.91
VSX1-206ENST00000444511 ZNF891A8MT65 544 aaPredicted RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 PYCARD-AS1I3L0S3 204 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 POLR1CO15160 346 aaPredicted RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 CAPN5O15484 640 aaPredicted RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 EPOP01588 193 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 ANKRD34CP0C6C1 535 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 RPL10P27635 214 aaKnown RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 MAP4P27816 1152 aaKnown RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 GFERP55789 205 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 ADCY2Q08462 1091 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 TMEM115Q12893 351 aaPredicted RBP20.7■□□□□ 0.9
VSX1-206ENST00000444511 SIRPB2Q5JXA9 342 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 ZDHHC20Q5W0Z9 365 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 BORAQ6PGQ7 559 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 ABRAXAS1Q6UWZ7 409 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 KATNAL2Q8IYT4 538 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 RCOR2Q8IZ40 523 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 C9orf72Q96LT7 481 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 FCRL5Q96RD9 977 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 VAT1Q99536 393 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 IL26Q9NPH9 171 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 POT1Q9NUX5 634 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 OGFRQ9NZT2 677 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 HACD3Q9P035 362 aa20.7■□□□□ 0.9
VSX1-206ENST00000444511 hCG_1818297A0A087WSY0 165 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 STK17BO94768 372 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 C9P02748 559 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 ITGB6P18564 788 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 SPAM1P38567 509 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 CHRNA4P43681 627 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 DRG2P55039 364 aaKnown RBP20.69■□□□□ 0.9
VSX1-206ENST00000444511 CLCA4Q14CN2 919 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 GLT6D1Q7Z4J2 308 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 ZNF567Q8N184 647 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 TTC30BQ8N4P2 665 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 IPMKQ8NFU5 416 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 BRSK1Q8TDC3 778 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 BLOC1S5Q8TDH9 187 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 CXorf40BQ96DE9 158 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 OXNAD1Q96HP4 312 aaPredicted RBP20.69■□□□□ 0.9
VSX1-206ENST00000444511 RBM41Q96IZ5 413 aaKnown RBP20.69■□□□□ 0.9
VSX1-206ENST00000444511 MRGPRX2Q96LB1 330 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 TGM7Q96PF1 710 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 EFHD1Q9BUP0 239 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 SPRY4Q9C004 299 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 ZCCHC2Q9C0B9 1178 aaKnown RBP20.69■□□□□ 0.9
VSX1-206ENST00000444511 TRIT1Q9H3H1 467 aaKnown RBP20.69■□□□□ 0.9
VSX1-206ENST00000444511 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.69■□□□□ 0.9
VSX1-206ENST00000444511 TRIM10Q9UDY6 481 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.69■□□□□ 0.9
VSX1-206ENST00000444511 SLC30A1Q9Y6M5 507 aa20.69■□□□□ 0.9
VSX1-206ENST00000444511 PRR19A6NJB7 356 aa20.68■□□□□ 0.9
VSX1-206ENST00000444511 OR52A4PA6NMU1 304 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms