RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 GPR33Q49SQ1 333 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 C22orf39Q6P5X5 142 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 SYT12Q8IV01 421 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 EEF1AKMT1Q8WVE0 214 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 GFM2Q969S9 779 aaKnown RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 CCDC90BQ9GZT6 254 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 NLE1Q9NVX2 485 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 DOLKQ9UPQ8 538 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 SAC3D1A6NKF1 404 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 WASH4PA8MWX3 477 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ECI2O75521 394 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 CAPN1P07384 714 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 NRG1Q02297 640 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 SFSWAPQ12872 951 aaKnown RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 KHDC1Q4VXA5 237 aaKnown RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 KDELC1Q6UW63 502 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 SLC44A2Q8IWA5 706 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 CENPLQ8N0S6 344 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 SAGE1Q9NXZ1 904 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 NUDT4Q9NZJ9 180 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 GALPQ9UBC7 116 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ASF1AQ9Y294 204 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 TP73O15350 636 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 OR1I1O60431 355 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 BMPR1AP36894 532 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 GRIA3P42263 894 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 NTHL1P78549 312 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 MAPKAPK3Q16644 382 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ZNF789Q5FWF6 425 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ZFP1Q6P2D0 407 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 TPRG1Q6ZUI0 275 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 ACAT2Q9BWD1 397 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 LEF1Q9UJU2 399 aaPredicted RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
SCAF4-202ENST00000399804 KCNE2Q9Y6J6 123 aa13.9□□□□□ -0.18
SCAF4-202ENST00000399804 F5P12259 2224 aa13.9□□□□□ -0.19
SCAF4-202ENST00000399804 SLC22A3O75751 556 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ABCB1P08183 1280 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 PSMD8P48556 350 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 VPS26BQ4G0F5 336 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 PPP2R2DQ66LE6 453 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 KLHDC10Q6PID8 442 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 PHTF2Q8N3S3 785 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 FBXW8Q8N3Y1 598 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 SEMA6AQ9H2E6 1030 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 RETREG1Q9H6L5 497 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 TRIM38O00635 465 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 KDM1AO60341 852 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ANPEPP15144 967 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 DDX6P26196 483 aaKnown RBP eCLIP13.89□□□□□ -0.192e-9■■■■■ 40
SCAF4-202ENST00000399804 HOXC8P31273 242 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 NRIP1P48552 1158 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 LRRC66Q68CR7 880 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF783Q6ZMS7 281 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF621Q6ZSS3 439 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 CPA6Q8N4T0 437 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 WDR83Q9BRX9 315 aaKnown RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 CDH22Q9UJ99 828 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 GOLGB1Q14789 3259 aaKnown RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 C15orf38-AP3S2A0A0A6YYH1 394 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 CCDC85CA6NKD9 419 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 H3BM21 787 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 PGLSO95336 258 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ATP6V1B1P15313 513 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 FASP25445 335 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 SATB1Q01826 763 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 WLSQ5T9L3 541 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 CCSAPQ6IQ19 270 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 DPY19L3Q6ZPD9 716 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ARPINQ7Z6K5 226 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF184Q99676 751 aaPredicted RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 OLFM1Q99784 485 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 PRKAG3Q9UGI9 489 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 EGFL7Q9UHF1 273 aa13.89□□□□□ -0.19
SCAF4-202ENST00000399804 FAM32AQ9Y421 112 aaKnown RBP13.89□□□□□ -0.19
SCAF4-202ENST00000399804 ZNF682O95780 498 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 PRSS56P0CW18 603 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 GRK3P35626 688 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ELP6Q0PNE2 266 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 NAE1Q13564 534 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TNFAIP8L3Q5GJ75 292 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TMEM25Q86YD3 366 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CELF5Q8N6W0 485 aaKnown RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 RNF145Q96MT1 663 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 TSC22D3Q99576 134 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 EBF3Q9H4W6 596 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 CAAP1Q9H8G2 361 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 MIEF1Q9NQG6 463 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 OGDHLQ9ULD0 1010 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 NCKAP1Q9Y2A7 1128 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 LRCH1Q9Y2L9 728 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 POLR3HQ9Y535 204 aaPredicted RBP13.88□□□□□ -0.19
SCAF4-202ENST00000399804 A0A0U1RQS6 177 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 LCHNA4D1U4 455 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 FFAR2O15552 330 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 KERAO60938 352 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ATG13O75143 517 aa13.88□□□□□ -0.19
SCAF4-202ENST00000399804 ADH5P11766 374 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms