RNA–Protein interactions for RNA: ENST00000396464.7

GABPB1-204, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,401 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-204ENST00000396464 HEXDCQ8WVB3 486 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.95□□□□□ -1.628e-6■■■■□ 19.7
GABPB1-204ENST00000396464 SGCDQ92629 289 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZG16BQ96DA0 208 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 C14orf79Q96F83 325 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PIWIL1Q96J94 861 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 TTC25Q96NG3 672 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 NECTIN4Q96NY8 510 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 TRIB1Q96RU8 372 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF577Q9BSK1 485 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PTDSS2Q9BVG9 487 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 SCNM1Q9BWG6 230 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 VN1R3Q9BXE9 311 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 C1QTNF1Q9BXJ1 281 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 KRTAP9-8Q9BYQ0 159 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RAB17Q9H0T7 212 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CARD9Q9H257 536 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 NOL11Q9H8H0 719 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ECT2Q9H8V3 914 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 GPN1Q9HCN4 374 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PIH1D3Q9NQM4 214 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FAM114A2Q9NRY5 505 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 PRMT7Q9NVM4 692 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 CTNNAL1Q9UBT7 734 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 STEAP1Q9UHE8 339 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 DNPEPQ9ULA0 475 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 VWA7Q9Y334 891 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RBM8AQ9Y5S9 174 aaKnown RBP4.95□□□□□ -1.62
GABPB1-204ENST00000396464 RB1CC1Q8TDY2 1594 aa4.95□□□□□ -1.62
GABPB1-204ENST00000396464 FER1L4A9Z1Z3 1794 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CYP3A7-CYP3A51PA0A087WV96 503 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 A0A087WZY1 265 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 FAM230AA0A1W2PPH8 454 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 A0A1W2PPM1 405 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 POLR2DO15514 142 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PJA2O43164 708 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CACNG3O60359 315 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 DAB1O75553 588 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 NPPAP01160 153 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ALDOAP04075 364 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 S100A9P06702 114 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 LIPFP07098 398 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SBK2P0C263 348 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 FCER1AP12319 257 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 GNAZP19086 355 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CYP3A7P24462 503 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CORO1AP31146 461 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PCGF2P35227 344 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 GNL1P36915 607 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 MTHFSP49914 203 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PRRX1P54821 245 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 NPEPPSP55786 919 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CLRN1P58418 232 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PTENP60484 403 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ADORA2A-AS1P86434 159 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 B4GALNT1Q00973 533 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 TFAP4Q01664 338 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SPIBQ01892 262 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 TNFRSF17Q02223 184 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 TAP2Q03519 686 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ABRQ12979 859 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SPP2Q13103 211 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 DOC2AQ14183 400 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 LPIN1Q14693 890 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CCDC152Q4G0S7 254 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CFAP157Q5JU67 520 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CCDC122Q5T0U0 273 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 RNASEH2BQ5TBB1 312 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 B3GNT6Q6ZMB0 384 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 MRGPRGQ86SM5 289 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ADAMTSL2Q86TH1 951 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 GPAT4Q86UL3 456 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 CAND1Q86VP6 1230 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PSTKQ8IV42 348 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SLC22A9Q8IVM8 553 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 FAM219AQ8IW50 185 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 MCEMP1Q8IX19 187 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PHC2Q8IXK0 858 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 PM20D2Q8IYS1 436 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ZNF321PQ8N8H1 164 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ENDOVQ8N8Q3 282 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 C9orf43Q8TAL5 461 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 ACTRT2Q8TDY3 377 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 C2CD4CQ8TF44 421 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SLC9A6Q92581 669 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 SPSB1Q96BD6 273 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 EPSTI1Q96J88 318 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 NAP1L3Q99457 506 aaPredicted RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 RAD9AQ99638 391 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 DDX50Q9BQ39 737 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 S1PR5Q9H228 398 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 MMP27Q9H306 513 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 MINDY3Q9H8M7 445 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 RPF1Q9H9Y2 349 aaKnown RBP4.94□□□□□ -1.62
GABPB1-204ENST00000396464 KLC4Q9NSK0 619 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 EXOC1Q9NV70 894 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 FAM30AQ9NZY2 134 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 TRIM10Q9UDY6 481 aa4.94□□□□□ -1.62
GABPB1-204ENST00000396464 TEKT2Q9UIF3 430 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms