RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 TAF1AQ15573 450 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNHIT3Q15649 155 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 PERM1Q5SV97 790 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 MZT2AQ6P582 158 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 LINGO4Q6UY18 593 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 POC5Q8NA72 575 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 GORASP1Q9BQQ3 440 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FNDC11Q9BVV2 318 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 WDR12Q9GZL7 423 aaKnown RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM83DQ9H4H8 585 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM47E-STBD1D6RA91 191 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 AP3D1O14617 1153 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FANCGO15287 622 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 CXCL14O95715 111 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 PAOXQ6QHF9 649 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM20CQ8IXL6 584 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 PLD4Q96BZ4 506 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 CXorf40BQ96DE9 158 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ABCG8Q9H221 673 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ATXN10Q9UBB4 475 aa16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZFP37Q9Y6Q3 630 aaPredicted RBP16.95■□□□□ 0.3
TRAPPC11-201ENST00000334690 EME2A4GXA9 379 aaPredicted RBP16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 NFKBIEO00221 500 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 IL6P05231 212 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 GTF2H2Q13888 395 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 DEFB115Q30KQ5 88 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 GPAT3Q53EU6 434 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 MZT2BQ6NZ67 158 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 GTF2H2CQ6P1K8 395 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 HDDC2Q7Z4H3 204 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 SCAMP5Q8TAC9 235 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 FKBPLQ9UIM3 349 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 PER2O15055 1255 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 KCNE1P15382 129 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 IGFBP5P24593 272 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 CCR3P51677 355 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 MANFP55145 182 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF599Q96NL3 588 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ABCB10Q9NRK6 738 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 RAPGEFL1Q9UHV5 662 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF487B1APH4 448 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 OR6B1O95007 311 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ADH1CP00326 375 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF33AQ06730 810 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 PAFAH1B3Q15102 231 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 MSS51Q4VC12 460 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 EIF2B4Q9UI10 523 aaKnown RBP16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 SIX4Q9UIU6 781 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ELNP15502 786 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 IMPDH1P20839 514 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 DNAJB1P25685 340 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 TIFABQ6ZNK6 161 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 SERPINA9Q86WD7 417 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 C11orf65Q8NCR3 313 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 OR4A15Q8NGL6 344 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 UBASH3BQ8TF42 649 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 LPIN3Q9BQK8 851 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 ACAT2Q9BWD1 397 aa16.94■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM149AA5PLN7 773 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 NAE1Q13564 534 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 ST13P5Q8NFI4 369 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 LRTOMTQ8WZ04 291 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 AQP12BA6NM10 295 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 AQP4P55087 323 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 KLF1Q13351 362 aaPredicted RBP16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC9B1Q4ZJI4 515 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM92BQ6ZTR7 304 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 NPAS4Q8IUM7 802 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 AQP12AQ8IXF9 295 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 COLGALT2Q8IYK4 626 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 PSMA8Q8TAA3 256 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 ZNF671Q8TAW3 534 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 NAT14Q8WUY8 206 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 GMLQ99445 158 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 AIF1LQ9BQI0 150 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC27A6Q9Y2P4 619 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 MYH10P35580 1976 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 NEDD8-MDP1E9PL57 170 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 FZD9O00144 591 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 POP4O95707 220 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 FYNP06241 537 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 CYP4B1P13584 511 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 AOC1P19801 751 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 MSANTD2Q6P1R3 559 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 FAM156AQ8NDB6 213 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 GIPC3Q8TF64 312 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 SIGLEC10Q96LC7 697 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 ADI1Q9BV57 179 aa16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 SUCOQ9UBS9 1254 aaKnown RBP16.93■□□□□ 0.3
TRAPPC11-201ENST00000334690 H0Y858 1186 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 HTR1BP28222 390 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC7A1P30825 629 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SLC26A3P40879 764 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 SSR2P43308 183 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 HERVK_113P63132 956 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 TCEA2Q15560 299 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 TMPRSS11BQ86T26 416 aa16.92■□□□□ 0.3
TRAPPC11-201ENST00000334690 PNPT1Q8TCS8 783 aaKnown RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms