RNA–Protein interactions for RNA: ENST00000641115.1

PHGDH-210, Transcript of phosphoglycerate dehydrogenase, humanhuman

BASIC

Gene PHGDH, Length 1,638 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-210ENST00000641115 PLEKHO1Q53GL0 409 aaPredicted RBP25.97■■□□□ 1.75
PHGDH-210ENST00000641115 MEX3CQ5U5Q3 659 aaKnown RBP25.97■■□□□ 1.75
PHGDH-210ENST00000641115 NGLY1Q96IV0 654 aa25.97■■□□□ 1.75
PHGDH-210ENST00000641115 WDR63Q8IWG1 891 aa25.96■■□□□ 1.75
PHGDH-210ENST00000641115 PKD1L3Q7Z443 1732 aa25.96■■□□□ 1.75
PHGDH-210ENST00000641115 WNK3Q9BYP7 1800 aa25.94■■□□□ 1.74
PHGDH-210ENST00000641115 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.94■■□□□ 1.74
PHGDH-210ENST00000641115 FBXO41Q8TF61 875 aa25.94■■□□□ 1.74
PHGDH-210ENST00000641115 CDCA7LQ96GN5 454 aa25.93■■□□□ 1.74
PHGDH-210ENST00000641115 USP35Q9P2H5 1018 aa25.93■■□□□ 1.74
PHGDH-210ENST00000641115 OVOS2A0A0G2JMS6 1433 aa25.93■■□□□ 1.74
PHGDH-210ENST00000641115 CALD1Q05682 793 aaKnown RBP25.92■■□□□ 1.74
PHGDH-210ENST00000641115 MAP3K5Q99683 1374 aa25.92■■□□□ 1.74
PHGDH-210ENST00000641115 E9PSI1 815 aa25.92■■□□□ 1.74
PHGDH-210ENST00000641115 IL2RBP14784 551 aa25.92■■□□□ 1.74
PHGDH-210ENST00000641115 RTF1Q92541 710 aaKnown RBP25.92■■□□□ 1.74
PHGDH-210ENST00000641115 GNAT3A8MTJ3 354 aa25.91■■□□□ 1.74
PHGDH-210ENST00000641115 ZNF530Q6P9A1 599 aaPredicted RBP25.91■■□□□ 1.74
PHGDH-210ENST00000641115 UNC5CLQ8IV45 518 aa25.91■■□□□ 1.74
PHGDH-210ENST00000641115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.91■■□□□ 1.74
PHGDH-210ENST00000641115 SPG7Q9UQ90 795 aa25.91■■□□□ 1.74
PHGDH-210ENST00000641115 HTATSF1O43719 755 aaKnown RBP25.9■■□□□ 1.74
PHGDH-210ENST00000641115 FNBP4Q8N3X1 1017 aaPredicted RBP25.9■■□□□ 1.74
PHGDH-210ENST00000641115 BCL9LQ86UU0 1499 aa25.89■■□□□ 1.74
PHGDH-210ENST00000641115 SLFN5Q08AF3 891 aa25.89■■□□□ 1.74
PHGDH-210ENST00000641115 C1orf141Q5JVX7 400 aa25.89■■□□□ 1.74
PHGDH-210ENST00000641115 VIRMAQ69YN4 1812 aaKnown RBP25.89■■□□□ 1.74
PHGDH-210ENST00000641115 IL16Q14005 1332 aa25.89■■□□□ 1.73
PHGDH-210ENST00000641115 AKAP4Q5JQC9 854 aa25.88■■□□□ 1.73
PHGDH-210ENST00000641115 CCDC9Q9Y3X0 531 aaKnown RBP25.87■■□□□ 1.73
PHGDH-210ENST00000641115 LRRC37A3O60309 1634 aa25.87■■□□□ 1.73
PHGDH-210ENST00000641115 SPATA31A1Q5TZJ5 1347 aa25.87■■□□□ 1.73
PHGDH-210ENST00000641115 DCTN1Q14203 1278 aa25.86■■□□□ 1.73
PHGDH-210ENST00000641115 THUMPD2Q9BTF0 503 aaKnown RBP25.86■■□□□ 1.73
PHGDH-210ENST00000641115 SPINK5Q9NQ38 1064 aaPredicted RBP25.86■■□□□ 1.73
PHGDH-210ENST00000641115 USP21Q9UK80 565 aa25.86■■□□□ 1.73
PHGDH-210ENST00000641115 THRAP3Q9Y2W1 955 aaKnown RBP25.86■■□□□ 1.73
PHGDH-210ENST00000641115 MCM10Q7L590 875 aa25.85■■□□□ 1.73
PHGDH-210ENST00000641115 MYH16Q9H6N6 1097 aa25.85■■□□□ 1.73
PHGDH-210ENST00000641115 SPATA31A5Q5VU36 1347 aa25.85■■□□□ 1.73
PHGDH-210ENST00000641115 SPATA31A7Q8IWB4 1347 aa25.85■■□□□ 1.73
PHGDH-210ENST00000641115 SHANK3Q9BYB0 1731 aa25.84■■□□□ 1.73
PHGDH-210ENST00000641115 DISP2A7MBM2 1401 aa25.84■■□□□ 1.73
PHGDH-210ENST00000641115 DUSP27Q5VZP5 1158 aa25.84■■□□□ 1.73
PHGDH-210ENST00000641115 VPS72Q15906 364 aa25.83■■□□□ 1.73
PHGDH-210ENST00000641115 TRMT2AQ8IZ69 625 aaKnown RBP25.83■■□□□ 1.73
PHGDH-210ENST00000641115 ZCRB1Q8TBF4 217 aaKnown RBP25.83■■□□□ 1.73
PHGDH-210ENST00000641115 PCDH11XQ9BZA7 1347 aa25.83■■□□□ 1.73
PHGDH-210ENST00000641115 PCDH11YQ9BZA8 1340 aa25.83■■□□□ 1.73
PHGDH-210ENST00000641115 AFF2P51816 1311 aa25.82■■□□□ 1.72
PHGDH-210ENST00000641115 IFNL2Q8IZJ0 200 aa25.81■■□□□ 1.72
PHGDH-210ENST00000641115 CDCA7Q9BWT1 371 aaPredicted RBP25.81■■□□□ 1.72
PHGDH-210ENST00000641115 SCN11AQ9UI33 1791 aa25.81■■□□□ 1.72
PHGDH-210ENST00000641115 ADAMTS7Q9UKP4 1686 aa25.81■■□□□ 1.72
PHGDH-210ENST00000641115 GNAI1P63096 354 aa25.81■■□□□ 1.72
PHGDH-210ENST00000641115 IFT57Q9NWB7 429 aa25.81■■□□□ 1.72
PHGDH-210ENST00000641115 PHKG2P15735 406 aa25.8■■□□□ 1.72
PHGDH-210ENST00000641115 LAS1LQ9Y4W2 734 aaKnown RBP25.8■■□□□ 1.72
PHGDH-210ENST00000641115 CEMIPQ8WUJ3 1361 aa25.78■■□□□ 1.72
PHGDH-210ENST00000641115 FANCIQ9NVI1 1328 aa25.78■■□□□ 1.72
PHGDH-210ENST00000641115 IL17REQ8NFR9 667 aa25.78■■□□□ 1.72
PHGDH-210ENST00000641115 CFAP44Q96MT7 982 aa25.78■■□□□ 1.72
PHGDH-210ENST00000641115 HSP90AB1P08238 724 aaKnown RBP25.77■■□□□ 1.72
PHGDH-210ENST00000641115 MPRIPQ6WCQ1 1025 aa25.77■■□□□ 1.72
PHGDH-210ENST00000641115 BARGINQ6ZT62 677 aa25.77■■□□□ 1.72
PHGDH-210ENST00000641115 CYP27B1O15528 508 aa25.77■■□□□ 1.72
PHGDH-210ENST00000641115 ILDR1Q86SU0 546 aaPredicted RBP25.76■■□□□ 1.71
PHGDH-210ENST00000641115 TSR2Q969E8 191 aaKnown RBP25.76■■□□□ 1.71
PHGDH-210ENST00000641115 TNS2Q63HR2 1409 aa25.76■■□□□ 1.71
PHGDH-210ENST00000641115 RNMTO43148 476 aaKnown RBP25.75■■□□□ 1.71
PHGDH-210ENST00000641115 ZNF853P0CG23 659 aa25.75■■□□□ 1.71
PHGDH-210ENST00000641115 LGR6Q9HBX8 967 aa25.74■■□□□ 1.71
PHGDH-210ENST00000641115 KDM6AO15550 1401 aaPredicted RBP25.74■■□□□ 1.71
PHGDH-210ENST00000641115 ATRNO75882 1429 aa25.73■■□□□ 1.71
PHGDH-210ENST00000641115 SIPA1L3O60292 1781 aaPredicted RBP25.73■■□□□ 1.71
PHGDH-210ENST00000641115 EXOC5O00471 708 aa25.73■■□□□ 1.71
PHGDH-210ENST00000641115 TEFQ10587 303 aa25.73■■□□□ 1.71
PHGDH-210ENST00000641115 DDX54Q8TDD1 881 aaKnown RBP25.73■■□□□ 1.71
PHGDH-210ENST00000641115 DCAF5Q96JK2 942 aa25.73■■□□□ 1.71
PHGDH-210ENST00000641115 TRPC5Q9UL62 973 aaPredicted RBP25.73■■□□□ 1.71
PHGDH-210ENST00000641115 MBIPQ9NS73 344 aa25.72■■□□□ 1.71
PHGDH-210ENST00000641115 GLI3P10071 1580 aa25.71■■□□□ 1.71
PHGDH-210ENST00000641115 CHL1O00533 1208 aa25.7■■□□□ 1.71
PHGDH-210ENST00000641115 DDB1Q16531 1140 aa25.7■■□□□ 1.71
PHGDH-210ENST00000641115 TAF7Q15545 349 aaPredicted RBP25.7■■□□□ 1.7
PHGDH-210ENST00000641115 FAM98CQ17RN3 349 aaKnown RBP25.7■■□□□ 1.7
PHGDH-210ENST00000641115 BABAM1Q9NWV8 329 aa25.7■■□□□ 1.7
PHGDH-210ENST00000641115 MRC1P22897 1456 aa25.69■■□□□ 1.7
PHGDH-210ENST00000641115 GJD4Q96KN9 370 aaPredicted RBP25.69■■□□□ 1.7
PHGDH-210ENST00000641115 TSPYL4Q9UJ04 414 aa25.69■■□□□ 1.7
PHGDH-210ENST00000641115 RCAN3Q9UKA8 241 aa25.69■■□□□ 1.7
PHGDH-210ENST00000641115 KDM3BQ7LBC6 1761 aa25.68■■□□□ 1.7
PHGDH-210ENST00000641115 THSD7AQ9UPZ6 1657 aa25.68■■□□□ 1.7
PHGDH-210ENST00000641115 NKX1-1Q15270 411 aaPredicted RBP25.68■■□□□ 1.7
PHGDH-210ENST00000641115 EXOSC9Q06265 439 aaKnown RBP25.67■■□□□ 1.7
PHGDH-210ENST00000641115 TOGARAM1Q9Y4F4 1720 aa25.65■■□□□ 1.7
PHGDH-210ENST00000641115 A0A0G2JS52 829 aa25.65■■□□□ 1.7
PHGDH-210ENST00000641115 CT47B1P0C2W7 299 aaPredicted RBP25.65■■□□□ 1.7
PHGDH-210ENST00000641115 MYT1Q01538 1121 aa25.65■■□□□ 1.7
PHGDH-210ENST00000641115 QTRT2Q9H974 415 aaKnown RBP25.65■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms