RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 SLURP2P0DP57 97 aa11.53□□□□□ -0.56
RFC1-217ENST00000639695 SUZ12Q15022 739 aaKnown RBP11.53□□□□□ -0.56
RFC1-217ENST00000639695 ATP1B4Q9UN42 357 aaPredicted RBP11.53□□□□□ -0.56
RFC1-217ENST00000639695 GDF11O95390 407 aa11.52□□□□□ -0.57
RFC1-217ENST00000639695 SV2AQ7L0J3 742 aa11.52□□□□□ -0.57
RFC1-217ENST00000639695 TMEM151AQ8N4L1 468 aa11.52□□□□□ -0.57
RFC1-217ENST00000639695 SVOPQ8N4V2 548 aa11.52□□□□□ -0.57
RFC1-217ENST00000639695 ESPNB1AK53 854 aa11.51□□□□□ -0.57
RFC1-217ENST00000639695 ARHGEF15O94989 841 aa11.51□□□□□ -0.57
RFC1-217ENST00000639695 NBPF20Q3BBV1 942 aa11.51□□□□□ -0.57
RFC1-217ENST00000639695 PTGIRP43119 386 aa11.5□□□□□ -0.57
RFC1-217ENST00000639695 TRAK2O60296 914 aa11.49□□□□□ -0.57
RFC1-217ENST00000639695 DZIP3Q86Y13 1208 aaKnown RBP11.49□□□□□ -0.57
RFC1-217ENST00000639695 TRIM34Q9BYJ4 488 aa11.49□□□□□ -0.57
RFC1-217ENST00000639695 TRIM26Q12899 539 aaPredicted RBP11.48□□□□□ -0.57
RFC1-217ENST00000639695 GAS6Q14393 721 aa11.48□□□□□ -0.57
RFC1-217ENST00000639695 CYLDQ9NQC7 956 aa11.48□□□□□ -0.57
RFC1-217ENST00000639695 RFC5P40937 340 aa11.47□□□□□ -0.57
RFC1-217ENST00000639695 CLUAP1Q96AJ1 413 aa11.46□□□□□ -0.57
RFC1-217ENST00000639695 ADAMTS2O95450 1211 aa11.45□□□□□ -0.58
RFC1-217ENST00000639695 RHOQP17081 205 aa11.45□□□□□ -0.58
RFC1-217ENST00000639695 LYPD4Q6UWN0 246 aa11.45□□□□□ -0.58
RFC1-217ENST00000639695 IRS1P35568 1242 aa11.44□□□□□ -0.58
RFC1-217ENST00000639695 LYSMD3Q7Z3D4 306 aa11.44□□□□□ -0.58
RFC1-217ENST00000639695 RAD21O60216 631 aa11.43□□□□□ -0.58
RFC1-217ENST00000639695 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
RFC1-217ENST00000639695 RANGAP1P46060 587 aaPredicted RBP11.43□□□□□ -0.58
RFC1-217ENST00000639695 MCM6Q14566 821 aa11.43□□□□□ -0.58
RFC1-217ENST00000639695 PRICKLE2Q7Z3G6 844 aa11.43□□□□□ -0.58
RFC1-217ENST00000639695 RNF225M0QZC1 329 aaPredicted RBP11.42□□□□□ -0.58
RFC1-217ENST00000639695 GIGYF1O75420 1035 aaPredicted RBP11.41□□□□□ -0.58
RFC1-217ENST00000639695 PNMA1Q8ND90 353 aa11.41□□□□□ -0.58
RFC1-217ENST00000639695 RNF144AP50876 292 aaPredicted RBP11.4□□□□□ -0.58
RFC1-217ENST00000639695 CCDC82Q8N4S0 544 aa11.4□□□□□ -0.58
RFC1-217ENST00000639695 ZNF837Q96EG3 531 aaPredicted RBP11.39□□□□□ -0.59
RFC1-217ENST00000639695 GPR25O00155 361 aa11.38□□□□□ -0.59
RFC1-217ENST00000639695 FBXO45P0C2W1 286 aa11.38□□□□□ -0.59
RFC1-217ENST00000639695 SRSF11Q05519 484 aaKnown RBP11.38□□□□□ -0.59
RFC1-217ENST00000639695 GJD4Q96KN9 370 aaPredicted RBP11.38□□□□□ -0.59
RFC1-217ENST00000639695 ZBTB7CA1YPR0 619 aa11.37□□□□□ -0.59
RFC1-217ENST00000639695 CELA2BP08218 269 aaPredicted RBP11.37□□□□□ -0.59
RFC1-217ENST00000639695 PROSER2Q86WR7 435 aaPredicted RBP11.37□□□□□ -0.59
RFC1-217ENST00000639695 SEPT12Q8IYM1 358 aa11.37□□□□□ -0.59
RFC1-217ENST00000639695 PCDHB9Q9Y5E1 797 aa11.37□□□□□ -0.59
RFC1-217ENST00000639695 ATP5J2-PTCD1G3V325 749 aa11.36□□□□□ -0.59
RFC1-217ENST00000639695 MARSP56192 900 aaKnown RBP11.36□□□□□ -0.59
RFC1-217ENST00000639695 ZBBXA8MT70 800 aa11.35□□□□□ -0.59
RFC1-217ENST00000639695 MEN1O00255 615 aa11.35□□□□□ -0.59
RFC1-217ENST00000639695 DBN1Q16643 649 aa11.35□□□□□ -0.59
RFC1-217ENST00000639695 GPAT2Q6NUI2 795 aa11.35□□□□□ -0.59
RFC1-217ENST00000639695 A0A1W2PRU2 124 aa11.34□□□□□ -0.59
RFC1-217ENST00000639695 TRIM22Q8IYM9 498 aa11.34□□□□□ -0.59
RFC1-217ENST00000639695 ZNF777Q9ULD5 760 aaPredicted RBP11.34□□□□□ -0.59
RFC1-217ENST00000639695 DNMT3AQ9Y6K1 912 aaPredicted RBP11.34□□□□□ -0.59
RFC1-217ENST00000639695 SCTRP47872 440 aa11.33□□□□□ -0.6
RFC1-217ENST00000639695 CCDC97Q96F63 343 aaPredicted RBP11.33□□□□□ -0.6
RFC1-217ENST00000639695 SERPINA10Q9UK55 444 aa11.33□□□□□ -0.6
RFC1-217ENST00000639695 ERVK-9P63128 1117 aa11.32□□□□□ -0.6
RFC1-217ENST00000639695 POU4F2Q12837 409 aa11.32□□□□□ -0.6
RFC1-217ENST00000639695 RIPOR1Q6ZS17 1223 aa11.32□□□□□ -0.6
RFC1-217ENST00000639695 BANK1Q8NDB2 785 aa11.31□□□□□ -0.6
RFC1-217ENST00000639695 IGF1RP08069 1367 aa11.3□□□□□ -0.6
RFC1-217ENST00000639695 GPR37L1O60883 481 aa11.3□□□□□ -0.6
RFC1-217ENST00000639695 KANK3Q6NY19 840 aa11.3□□□□□ -0.6
RFC1-217ENST00000639695 MBIPQ9NS73 344 aa11.3□□□□□ -0.6
RFC1-217ENST00000639695 GPC1P35052 558 aa11.29□□□□□ -0.6
RFC1-217ENST00000639695 MAP3K10Q02779 954 aa11.29□□□□□ -0.6
RFC1-217ENST00000639695 TMEM259Q4ZIN3 620 aa11.29□□□□□ -0.6
RFC1-217ENST00000639695 CC2D2BQ6DHV5 1058 aa11.29□□□□□ -0.6
RFC1-217ENST00000639695 GTPBP3Q969Y2 492 aaKnown RBP11.29□□□□□ -0.6
RFC1-217ENST00000639695 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
RFC1-217ENST00000639695 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
RFC1-217ENST00000639695 FNBP4Q8N3X1 1017 aaPredicted RBP11.28□□□□□ -0.6
RFC1-217ENST00000639695 GAS2L1Q99501 681 aaPredicted RBP11.28□□□□□ -0.6
RFC1-217ENST00000639695 GRIP2Q9C0E4 1043 aa11.28□□□□□ -0.6
RFC1-217ENST00000639695 DYRK1BQ9Y463 629 aa11.28□□□□□ -0.6
RFC1-217ENST00000639695 ACDQ96AP0 544 aa11.27□□□□□ -0.61
RFC1-217ENST00000639695 NBPF10Q6P3W6 841 aaKnown RBP11.26□□□□□ -0.61
RFC1-217ENST00000639695 NBPF15Q8N660 670 aa11.26□□□□□ -0.61
RFC1-217ENST00000639695 POM121Q96HA1 1249 aa11.26□□□□□ -0.61
RFC1-217ENST00000639695 OSBPL3Q9H4L5 887 aa11.26□□□□□ -0.61
RFC1-217ENST00000639695 ITGB2P05107 769 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 THBS1P07996 1170 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 SLC27A3Q5K4L6 730 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 WWC1Q8IX03 1113 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 GMCL1Q96IK5 515 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 ARHGEF10LQ9HCE6 1279 aa11.25□□□□□ -0.61
RFC1-217ENST00000639695 CLN3Q13286 438 aa11.24□□□□□ -0.61
RFC1-217ENST00000639695 RAB6BQ9NRW1 208 aa11.24□□□□□ -0.61
RFC1-217ENST00000639695 COG6Q9Y2V7 657 aa11.24□□□□□ -0.61
RFC1-217ENST00000639695 PCDHB11Q9Y5F2 797 aa11.24□□□□□ -0.61
RFC1-217ENST00000639695 NR1H3Q13133 447 aa11.23□□□□□ -0.61
RFC1-217ENST00000639695 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
RFC1-217ENST00000639695 PRM3Q9NNZ6 103 aa11.23□□□□□ -0.61
RFC1-217ENST00000639695 ZNF330Q9Y3S2 320 aaPredicted RBP11.23□□□□□ -0.61
RFC1-217ENST00000639695 SPATA31C2B4DYI2 1134 aa11.22□□□□□ -0.61
RFC1-217ENST00000639695 IGHA1P01876 353 aa11.22□□□□□ -0.61
RFC1-217ENST00000639695 BCRP11274 1271 aa11.22□□□□□ -0.61
RFC1-217ENST00000639695 CCDC9Q9Y3X0 531 aaKnown RBP11.22□□□□□ -0.61
RFC1-217ENST00000639695 FOXR1Q6PIV2 292 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms