RNA–Protein interactions for RNA: ENST00000638283.1

KCNMA1-231, Transcript of potassium calcium-activated channel subfamily M alpha 1, human

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KCNMA1-231	ENST00000638283	BCL9L	Q86UU0	1499 aa		11.66	□□□□□ -0.54
KCNMA1-231	ENST00000638283	DUSP27	Q5VZP5	1158 aa		11.66	□□□□□ -0.54
KCNMA1-231	ENST00000638283	DLG5	Q8TDM6	1919 aa		11.66	□□□□□ -0.54
KCNMA1-231	ENST00000638283	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	GAS2L2	Q8NHY3	880 aa		11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	TSR2	Q969E8	191 aa	Known RBP	11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	TAT	P17735	454 aa	Predicted RBP	11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	MEX3C	Q5U5Q3	659 aa	Known RBP	11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	NGEF	Q8N5V2	710 aa		11.65	□□□□□ -0.54
KCNMA1-231	ENST00000638283	PLEKHO1	Q53GL0	409 aa	Predicted RBP	11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	NRAP	Q86VF7	1730 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	WDR63	Q8IWG1	891 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	FNBP4	Q8N3X1	1017 aa	Predicted RBP	11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	IL17RE	Q8NFR9	667 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	LGR6	Q9HBX8	967 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	PDE3B	Q13370	1112 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	UNC5CL	Q8IV45	518 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	TRMT2A	Q8IZ69	625 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	LAS1L	Q9Y4W2	734 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	GNAT3	A8MTJ3	354 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	MPRIP	Q6WCQ1	1025 aa		11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	CCDC9	Q9Y3X0	531 aa	Known RBP	11.64	□□□□□ -0.55
KCNMA1-231	ENST00000638283	CYP27B1	O15528	508 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	IL2RB	P14784	551 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	NCBP3	Q53F19	620 aa	Known RBP	11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	SPATA31A1	Q5TZJ5	1347 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	OVOS2	A0A0G2JMS6	1433 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	AMOT	Q4VCS5	1084 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	FBXO41	Q8TF61	875 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	MIS18A	Q9NYP9	233 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	USP21	Q9UK80	565 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	MAP3K5	Q99683	1374 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283		E9PSI1	815 aa		11.63	□□□□□ -0.55
KCNMA1-231	ENST00000638283	AFF2	P51816	1311 aa		11.62	□□□□□ -0.55
KCNMA1-231	ENST00000638283	SPATA31A5	Q5VU36	1347 aa		11.62	□□□□□ -0.55
KCNMA1-231	ENST00000638283	SPATA31A7	Q8IWB4	1347 aa		11.62	□□□□□ -0.55
KCNMA1-231	ENST00000638283	RTF1	Q92541	710 aa	Known RBP	11.62	□□□□□ -0.55
KCNMA1-231	ENST00000638283	AKAP4	Q5JQC9	854 aa		11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	FANCI	Q9NVI1	1328 aa		11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	PHKG2	P15735	406 aa		11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	LMOD3	Q0VAK6	560 aa		11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	ZCRB1	Q8TBF4	217 aa	Known RBP	11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	DDX54	Q8TDD1	881 aa	Known RBP	11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	SPG7	Q9UQ90	795 aa		11.61	□□□□□ -0.55
KCNMA1-231	ENST00000638283	DISP2	A7MBM2	1401 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	C1orf141	Q5JVX7	400 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	NWD2	Q9ULI1	1742 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	ZNF853	P0CG23	659 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	ERICH6	Q7L0X2	663 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	MBIP	Q9NS73	344 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	EP400	Q96L91	3159 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	VPS72	Q15906	364 aa		11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	FAM98C	Q17RN3	349 aa	Known RBP	11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	11.6	□□□□□ -0.55
KCNMA1-231	ENST00000638283	IL16	Q14005	1332 aa		11.59	□□□□□ -0.55
KCNMA1-231	ENST00000638283	CEMIP	Q8WUJ3	1361 aa		11.59	□□□□□ -0.55
KCNMA1-231	ENST00000638283	KDM6A	O15550	1401 aa	Predicted RBP	11.59	□□□□□ -0.55
KCNMA1-231	ENST00000638283	RNMT	O43148	476 aa	Known RBP	11.58	□□□□□ -0.55
KCNMA1-231	ENST00000638283	KRT24	Q2M2I5	525 aa		11.58	□□□□□ -0.55
KCNMA1-231	ENST00000638283	CFAP44	Q96MT7	982 aa		11.58	□□□□□ -0.55
KCNMA1-231	ENST00000638283	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.58	□□□□□ -0.55
KCNMA1-231	ENST00000638283	HTATSF1	O43719	755 aa	Known RBP	11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	PKD1L3	Q7Z443	1732 aa		11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	IFNL2	Q8IZJ0	200 aa		11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	IFT57	Q9NWB7	429 aa		11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	EXOSC9	Q06265	439 aa	Known RBP	11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	MYH16	Q9H6N6	1097 aa		11.58	□□□□□ -0.56
KCNMA1-231	ENST00000638283	PARP4	Q9UKK3	1724 aa	Known RBP	11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	PCDH11X	Q9BZA7	1347 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	PCDH11Y	Q9BZA8	1340 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	CHL1	O00533	1208 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	TSPYL6	Q8N831	410 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	SHANK3	Q9BYB0	1731 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	ELL2	O00472	640 aa	Predicted RBP	11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	GNAI1	P63096	354 aa		11.57	□□□□□ -0.56
KCNMA1-231	ENST00000638283	THRAP3	Q9Y2W1	955 aa	Known RBP	11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	KCNQ3	O43525	872 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	CALD1	Q05682	793 aa	Known RBP	11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	LRRC37A3	O60309	1634 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	EXOC5	O00471	708 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	BARGIN	Q6ZT62	677 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	C8orf58	Q8NAV2	365 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	GJD4	Q96KN9	370 aa	Predicted RBP	11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	RCAN3	Q9UKA8	241 aa		11.56	□□□□□ -0.56
KCNMA1-231	ENST00000638283	NFATC2IP	Q8NCF5	419 aa		11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	QTRT2	Q9H974	415 aa	Known RBP	11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	TSPYL4	Q9UJ04	414 aa		11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	GTF3C3	Q9Y5Q9	886 aa		11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	TAF7	Q15545	349 aa	Predicted RBP	11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	DCAF5	Q96JK2	942 aa		11.55	□□□□□ -0.56
KCNMA1-231	ENST00000638283	TEF	Q10587	303 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	DDB1	Q16531	1140 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	GLI3	P10071	1580 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	ATRN	O75882	1429 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283		A0A0G2JS52	829 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	BCL2L13	Q9BXK5	485 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	PLEKHG2	Q9H7P9	1386 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	BCAR3	O75815	825 aa		11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	MARCH10	Q8NA82	808 aa	Predicted RBP	11.54	□□□□□ -0.56
KCNMA1-231	ENST00000638283	WNK3	Q9BYP7	1800 aa		11.53	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms