RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 RAB3GAP2Q9H2M9 1393 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 DNAJC21Q5F1R6 531 aaKnown RBP22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 RIC3Q7Z5B4 369 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 PPP1R14CQ8TAE6 165 aa22.51■■□□□ 1.19
CACNA1A-257ENST00000638009 PPM1FP49593 454 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 GTF2A1P52655 376 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 RAB34Q9BZG1 259 aa22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 KIF6Q6ZMV9 814 aa22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 CIZ1Q9ULV3 898 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 IFI16Q16666 785 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 SMARCC1Q92922 1105 aaPredicted RBP22.5■■□□□ 1.19
CACNA1A-257ENST00000638009 BCL2L13Q9BXK5 485 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC7Q96M83 1385 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 ESPNB1AK53 854 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 KIF20AO95235 890 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 TTC14Q96N46 770 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 NEK4P51957 841 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 KRT32Q14532 448 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC158Q5M9N0 1113 aa22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-257ENST00000638009 CFAP100Q494V2 611 aa22.48■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC110Q8TBZ0 833 aa22.48■■□□□ 1.19
CACNA1A-257ENST00000638009 NUP62CLQ9H1M0 184 aa22.48■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC160A6NGH7 325 aa22.48■■□□□ 1.19
CACNA1A-257ENST00000638009 ZSCAN30Q86W11 494 aa22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC178Q5BJE1 867 aa22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 RUNDC1Q96C34 613 aa22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 PHAXQ9H814 394 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 GSDMDP57764 484 aa22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 MAP3K11Q16584 847 aa22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 DHX37Q8IY37 1157 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 MPHOSPH10O00566 681 aaKnown RBP22.47■■□□□ 1.19
CACNA1A-257ENST00000638009 PLEKHH1Q9ULM0 1364 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 MAP4K4O95819 1239 aaPredicted RBP22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 CACNA2D4Q7Z3S7 1137 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 CCDC155Q8N6L0 562 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 SPATA32Q96LK8 384 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 NACADO15069 1562 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 KIF4AO95239 1232 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 ACTN2P35609 894 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 AK9Q5TCS8 1911 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 CAVIN2O95810 425 aa22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 RRP7AQ9Y3A4 280 aaKnown RBP22.46■■□□□ 1.19
CACNA1A-257ENST00000638009 SMC6Q96SB8 1091 aa22.45■■□□□ 1.19
CACNA1A-257ENST00000638009 MAP3K9P80192 1104 aa22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 LNPKQ9C0E8 428 aa22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 CTAGE5O15320 804 aa22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 CKAP4Q07065 602 aaKnown RBP22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 MAP7D1Q3KQU3 841 aa22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 TTC12Q9H892 705 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 TRHP20396 242 aaPredicted RBP22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 FAM184BQ9ULE4 1060 aa22.45■■□□□ 1.18
CACNA1A-257ENST00000638009 CNGA1P29973 690 aa22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 IQCGQ9H095 443 aaKnown RBP22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 TACC1O75410 805 aa22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 MSL1Q68DK7 614 aa22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 CTNNA3Q9UI47 895 aa22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 CCDC172P0C7W6 258 aa22.44■■□□□ 1.18
CACNA1A-257ENST00000638009 DIAPH1O60610 1272 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-257ENST00000638009 STIM2Q9P246 746 aa22.43■■□□□ 1.18
CACNA1A-257ENST00000638009 EFCAB2Q5VUJ9 269 aa22.43■■□□□ 1.18
CACNA1A-257ENST00000638009 PAIP2Q9BPZ3 127 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-257ENST00000638009 DRC1Q96MC2 740 aa22.43■■□□□ 1.18
CACNA1A-257ENST00000638009 AIMP1Q12904 312 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 RIPK4P57078 832 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 GCC1Q96CN9 775 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 ATP2B1P20020 1258 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 PYM1Q9BRP8 204 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 DYNC1I1O14576 645 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 SYTL4Q96C24 671 aaPredicted RBP22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 A0A1W2PRG0 241 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 LARP1BQ659C4 914 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 PUS7Q96PZ0 661 aaKnown RBP22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 WASHC2CQ9Y4E1 1318 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 PPP1R9BQ96SB3 815 aa22.42■■□□□ 1.18
CACNA1A-257ENST00000638009 MCM5P33992 734 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 CCDC14Q49A88 953 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 TSPYL4Q9UJ04 414 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 PRKCSHP14314 528 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 SH3BGRP55822 239 aaPredicted RBP22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 HLTFQ14527 1009 aaKnown RBP eCLIP22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 CCDC30Q5VVM6 783 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 PPP6R1Q9UPN7 881 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 TTC21AQ8NDW8 1320 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 GMNNO75496 209 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 MIPOL1Q8TD10 442 aa22.41■■□□□ 1.18
CACNA1A-257ENST00000638009 SEC63Q9UGP8 760 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 PAXBP1Q9Y5B6 917 aa22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 ZNF76P36508 570 aa22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 CTNNBL1Q8WYA6 563 aaPredicted RBP22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 USP47Q96K76 1375 aa22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 HSF2BPO75031 334 aa22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 CEBPZQ03701 1054 aaKnown RBP22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 FEZ2Q9UHY8 353 aaPredicted RBP22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 KIF4BQ2VIQ3 1234 aa22.4■■□□□ 1.18
CACNA1A-257ENST00000638009 PPFIA2O75334 1257 aa22.39■■□□□ 1.18
CACNA1A-257ENST00000638009 SH2D4BQ5SQS7 431 aa22.39■■□□□ 1.18
CACNA1A-257ENST00000638009 ZSCAN31Q96LW9 406 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-257ENST00000638009 IRX3P78415 501 aaPredicted RBP22.39■■□□□ 1.18
CACNA1A-257ENST00000638009 KIF5AQ12840 1032 aa22.39■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms