RNA–Protein interactions for RNA: ENST00000637791.1

MECP2-223, Transcript of methyl-CpG binding protein 2, human

TSL 5

Gene MECP2, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MECP2-223	ENST00000637791	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	6.11	□□□□□ -1.43
MECP2-223	ENST00000637791	ADAMTSL3	P82987	1691 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	TOPAZ1	Q8N9V7	1692 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	LMTK3	Q96Q04	1460 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	SSH2	Q76I76	1423 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	RAPGEF4	Q8WZA2	1011 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	LTV1	Q96GA3	475 aa	Predicted RBP	6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	EYA1	Q99502	592 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	SPG7	Q9UQ90	795 aa		6.1	□□□□□ -1.43
MECP2-223	ENST00000637791	DCC	P43146	1447 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	KDR	P35968	1356 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	MAP3K5	Q99683	1374 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	ELL2	O00472	640 aa	Predicted RBP	6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	GC	P02774	474 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	SLC4A2	P04920	1241 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	CSB-PGBD3	P0DP91	1061 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	TAT	P17735	454 aa	Predicted RBP	6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	FBLN1	P23142	703 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	AKAP4	Q5JQC9	854 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	TMEM57	Q8N5G2	664 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	IL27	Q8NEV9	243 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	ZBTB40	Q9NUA8	1239 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	USP35	Q9P2H5	1018 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	PDZRN3	Q9UPQ7	1066 aa		6.09	□□□□□ -1.43
MECP2-223	ENST00000637791	CHD2	O14647	1828 aa	Known RBP	6.09	□□□□□ -1.44
MECP2-223	ENST00000637791	FMN2	Q9NZ56	1722 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	PLEKHG2	Q9H7P9	1386 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	SOCS7	O14512	581 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	FOXO3	O43524	673 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	DDX58	O95786	925 aa	Known RBP	6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	IGHD	P01880	384 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	MTHFSD	Q2M296	383 aa	Known RBP	6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	HSP90AB4P	Q58FF6	505 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	ANKRD45	Q5TZF3	282 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	NUTM2G	Q5VZR2	741 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	INTS3	Q68E01	1043 aa	Known RBP	6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	MCM10	Q7L590	875 aa		6.08	□□□□□ -1.44
MECP2-223	ENST00000637791	ABCC4	O15439	1325 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	NRK	Q7Z2Y5	1582 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	ZBTB7B	O15156	539 aa	Predicted RBP	6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	GNAI2	P04899	355 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	ZNF530	Q6P9A1	599 aa	Predicted RBP	6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	CHD1L	Q86WJ1	897 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	AEBP1	Q8IUX7	1158 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	SMC5	Q8IY18	1101 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	C8orf58	Q8NAV2	365 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	FBXO41	Q8TF61	875 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	THUMPD2	Q9BTF0	503 aa	Known RBP	6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	KIF1A	Q12756	1690 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	NCAPD2	Q15021	1401 aa		6.07	□□□□□ -1.44
MECP2-223	ENST00000637791	KDM4F	A0A1W2PPD8	638 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	FAM83G	A6ND36	823 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	BTBD11	A6QL63	1104 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	RLBP1	P12271	317 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	NUCB1	Q02818	461 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	FKBP5	Q13451	457 aa	Predicted RBP	6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	DCTN1	Q14203	1278 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	HDGFL1	Q5TGJ6	251 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	ARHGEF25	Q86VW2	580 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	TTC5	Q8N0Z6	440 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	ANKRD24	Q8TF21	1146 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	SRCIN1	Q9C0H9	1055 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	PCDHB15	Q9Y5E8	787 aa		6.06	□□□□□ -1.44
MECP2-223	ENST00000637791	NALCN	Q8IZF0	1738 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	MCC	P23508	829 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	NEXN	Q0ZGT2	675 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	BMP2KL	Q5H9B9	411 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	SLC4A10	Q6U841	1118 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	NLRP2	Q9NX02	1062 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	HYPK	Q9NX55	129 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	DBF4	Q9UBU7	674 aa	Predicted RBP	6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	TMEM94	Q12767	1356 aa		6.05	□□□□□ -1.44
MECP2-223	ENST00000637791	USP19	O94966	1318 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	C1orf167	Q5SNV9	1468 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	RAB11FIP3	O75154	756 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	UBTFL1	P0CB47	393 aa	Predicted RBP	6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	PTMS	P20962	102 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	EVA1C	P58658	441 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	FLII	Q13045	1269 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	HSCB	Q8IWL3	235 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	IFNL2	Q8IZJ0	200 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	TSPYL6	Q8N831	410 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	ANKRD44	Q8N8A2	993 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	GPATCH3	Q96I76	525 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	ORAI2	Q96SN7	254 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	DCTPP1	Q9H773	170 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	OVOS2	A0A0G2JMS6	1433 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	NWD1	Q149M9	1564 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	USP54	Q70EL1	1684 aa		6.04	□□□□□ -1.44
MECP2-223	ENST00000637791	CRB1	P82279	1406 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	RNMT	O43148	476 aa	Known RBP	6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	CDC45	O75419	566 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	ALDH1L1	O75891	902 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	REC8	O95072	547 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	HSP90AA1	P07900	732 aa	Known RBP	6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	C8orf34	Q49A92	452 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	NBPF6	Q5VWK0	638 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	ERC1	Q8IUD2	1116 aa		6.03	□□□□□ -1.44
MECP2-223	ENST00000637791	NBPF4	Q96M43	638 aa		6.03	□□□□□ -1.44

Retrieved 100 of 20,778 RNA–protein pairs in 185.6 ms