RNA–Protein interactions for RNA: ENST00000627566.1

KCNIP4-IT1-201, KCNIP4 intronic transcript 1, humanhuman

BASIC

Gene KCNIP4-IT1, Length 9,848 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4-IT1-201ENST00000627566 MACROD2A1Z1Q3 448 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SLMAPQ14BN4 828 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CCDC6Q16204 474 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ZNF513Q8N8E2 541 aaPredicted RBP3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CCDC112Q8NEF3 446 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 IPO4Q8TEX9 1081 aaKnown RBP3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 LRRCC1Q9C099 1032 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 VPS37CA5D8V6 355 aaPredicted RBP3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 PLEKHD1A6NEE1 506 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TTC36A6NLP5 189 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ATICP31939 592 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 BTN2A1Q7KYR7 527 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 EFCAB5A4FU69 1503 aa3.43□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MAP7D1Q3KQU3 841 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ZNF142P52746 1687 aaPredicted RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ZNF131P52739 623 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 GOLGA2Q08379 1002 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 DDX46Q7L014 1031 aaKnown RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 VPS37DQ86XT2 251 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MIER1Q8N108 512 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CCDC148Q8NFR7 591 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 BICD2Q8TD16 824 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ATP6V1E2Q96A05 226 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SPATA17Q96L03 361 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 BRMS1Q9HCU9 246 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MAFGO15525 162 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 RNF8O76064 485 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 IGBP1P78318 339 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CPLX3Q8WVH0 158 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 BHMTQ93088 406 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 IWS1Q96ST2 819 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NUCKS1Q9H1E3 243 aaKnown RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 C3P01024 1663 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 KIAA1551Q9HCM1 1747 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SIPA1L3O60292 1781 aaPredicted RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ANKRD62A6NC57 917 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MPNDQ8N594 471 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CDCA5Q96FF9 252 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NUB1Q9Y5A7 615 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 BAG4O95429 457 aaKnown RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NLRP5P59047 1200 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MPP4Q96JB8 637 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 USP32Q8NFA0 1604 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 IPO7O95373 1038 aaKnown RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 RGS3P49796 1198 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SOGA3Q5TF21 947 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TRIM52Q96A61 297 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CEP83Q9Y592 693 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SPAG9O60271 1321 aaKnown RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 FANCIQ9NVI1 1328 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MADDQ8WXG6 1647 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TXLNBQ8N3L3 684 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TIGD1Q96MW7 591 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MAGI2Q86UL8 1455 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 PPLO60437 1756 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 PLS1Q14651 629 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 FOXD4L5Q5VV16 416 aaPredicted RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 FAM76AQ8TAV0 307 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 RAB3IL1Q8TBN0 382 aa3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 FOXD4L4Q8WXT5 416 aaPredicted RBP3.42□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 hCG_2014768A0A024R1R8 64 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 KIF2AO00139 706 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 DTNBO60941 627 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TUBBP07437 444 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ZBTB9Q96C00 473 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SPOCK3Q9BQ16 436 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TRIM55Q9BYV6 548 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ANO2Q9NQ90 1003 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 UNC13BO14795 1591 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CENPJQ9HC77 1338 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 POTEB3A0JP26 581 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 GCOM1H8Y6P7 765 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 POTEBQ6S5H4 581 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 PNMA1Q8ND90 353 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 ZNF831Q5JPB2 1677 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MCM6Q14566 821 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MSL3Q8N5Y2 521 aaKnown RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NUP133Q8WUM0 1156 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 RABGAP1Q9Y3P9 1069 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TUBB4AP04350 444 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NUCB1Q02818 461 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 GKAP1Q5VSY0 366 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 AEBP2Q6ZN18 517 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SEC62Q99442 399 aaKnown RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 CHMP2AO43633 222 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SLC26A8Q96RN1 970 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 MTUS2Q5JR59 1369 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SMIM24O75264 130 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 DNAJC8O75937 253 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TERF1P54274 439 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 LUC7LQ9NQ29 371 aaKnown RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SLX4Q8IY92 1834 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NDC80O14777 642 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 HIP1RO75146 1068 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 SLC9A5Q14940 896 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NBPF6Q5VWK0 638 aa3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 TTC19Q6DKK2 380 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 NBPF5PQ86XG9 351 aaPredicted RBP3.41□□□□□ -1.86
KCNIP4-IT1-201ENST00000627566 EXOC8Q8IYI6 725 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms