RNA–Protein interactions for RNA: ENST00000627328.2

PTP4A2-220, Transcript of protein tyrosine phosphatase type IVA, member 2, humanhuman

TSL 5 BASIC

Gene PTP4A2, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A2-220ENST00000627328 ZFP64Q9NPA5 681 aa7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 LIMD1Q9UGP4 676 aa7.53□□□□□ -1.2
PTP4A2-220ENST00000627328 CFAP99D6REC4 459 aa7.52□□□□□ -1.21
PTP4A2-220ENST00000627328 GPR25O00155 361 aa7.52□□□□□ -1.21
PTP4A2-220ENST00000627328 DHX9Q08211 1270 aaKnown RBP7.52□□□□□ -1.21
PTP4A2-220ENST00000627328 SKIV2LQ15477 1246 aaKnown RBP7.52□□□□□ -1.21
PTP4A2-220ENST00000627328 SH3D19Q5HYK7 790 aa7.52□□□□□ -1.21
PTP4A2-220ENST00000627328 MX2P20592 715 aa7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 NBPF14Q5TI25 921 aa7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 LYSMD3Q7Z3D4 306 aa7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 AGBL1Q96MI9 1066 aa7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 KRTAP4-7Q9BYR0 210 aa7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 GPBP1L1Q9HC44 474 aaPredicted RBP7.51□□□□□ -1.21
PTP4A2-220ENST00000627328 H7C1W4 665 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 QPCTQ16769 361 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 CSPP1Q1MSJ5 1256 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 ARTNQ5T4W7 220 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 CD163Q86VB7 1156 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 CABLES1Q8TDN4 633 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 RRAGCQ9HB90 399 aa7.5□□□□□ -1.21
PTP4A2-220ENST00000627328 MAP2K3P46734 347 aa7.49□□□□□ -1.21
PTP4A2-220ENST00000627328 OXCT2Q9BYC2 517 aaPredicted RBP7.49□□□□□ -1.21
PTP4A2-220ENST00000627328 FAM117AQ9C073 453 aa7.49□□□□□ -1.21
PTP4A2-220ENST00000627328 GOPCQ9HD26 462 aa7.49□□□□□ -1.21
PTP4A2-220ENST00000627328 POLR3EQ9NVU0 708 aa7.49□□□□□ -1.21
PTP4A2-220ENST00000627328 MAGEB6P1A0A0J9YX57 407 aa7.48□□□□□ -1.21
PTP4A2-220ENST00000627328 DOC2BQ14184 412 aa7.48□□□□□ -1.21
PTP4A2-220ENST00000627328 SH3BP5LQ7L8J4 393 aa7.47□□□□□ -1.21
PTP4A2-220ENST00000627328 ZNF395Q9H8N7 513 aaPredicted RBP7.47□□□□□ -1.21
PTP4A2-220ENST00000627328 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
PTP4A2-220ENST00000627328 DBN1Q16643 649 aa7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 FOXD4L5Q5VV16 416 aaPredicted RBP7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 PPP2R2DQ66LE6 453 aa7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 RIPOR1Q6ZS17 1223 aa7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 GTPBP3Q969Y2 492 aaKnown RBP7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.46□□□□□ -1.22
PTP4A2-220ENST00000627328 SHISA8B8ZZ34 492 aa7.45□□□□□ -1.22
PTP4A2-220ENST00000627328 RTL5Q5HYW3 569 aaPredicted RBP7.45□□□□□ -1.22
PTP4A2-220ENST00000627328 TSC1Q92574 1164 aa7.45□□□□□ -1.22
PTP4A2-220ENST00000627328 NOP53Q9NZM5 478 aaKnown RBP7.45□□□□□ -1.22
PTP4A2-220ENST00000627328 GNB5O14775 395 aa7.44□□□□□ -1.22
PTP4A2-220ENST00000627328 CHRNA4P43681 627 aa7.44□□□□□ -1.22
PTP4A2-220ENST00000627328 NEUROD2Q15784 382 aa7.44□□□□□ -1.22
PTP4A2-220ENST00000627328 LCE1DQ5T752 114 aa7.44□□□□□ -1.22
PTP4A2-220ENST00000627328 GDF2Q9UK05 429 aaPredicted RBP7.44□□□□□ -1.22
PTP4A2-220ENST00000627328 PER1O15534 1290 aaPredicted RBP7.43□□□□□ -1.22
PTP4A2-220ENST00000627328 COBLO75128 1261 aa7.43□□□□□ -1.22
PTP4A2-220ENST00000627328 LINC00114Q6XXX2 140 aa7.43□□□□□ -1.22
PTP4A2-220ENST00000627328 KCTD15Q96SI1 283 aaPredicted RBP7.43□□□□□ -1.22
PTP4A2-220ENST00000627328 SUV39H2Q9H5I1 410 aa7.43□□□□□ -1.22
PTP4A2-220ENST00000627328 FOXD4L6Q3SYB3 417 aaPredicted RBP7.42□□□□□ -1.22
PTP4A2-220ENST00000627328 ERFEQ4G0M1 354 aa7.42□□□□□ -1.22
PTP4A2-220ENST00000627328 FOXD4L3Q6VB84 417 aaPredicted RBP7.42□□□□□ -1.22
PTP4A2-220ENST00000627328 EDARADDQ8WWZ3 215 aa7.42□□□□□ -1.22
PTP4A2-220ENST00000627328 GPKOWQ92917 476 aaPredicted RBP eCLIP7.42□□□□□ -1.224e-6■□□□□ 10.4
PTP4A2-220ENST00000627328 CARD14Q9BXL6 1004 aa7.42□□□□□ -1.22
PTP4A2-220ENST00000627328 ADH1AP07327 375 aa7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 GATA4P43694 442 aa7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 TPRNQ4KMQ1 711 aa7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 PRICKLE2Q7Z3G6 844 aa7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 ATP1B4Q9UN42 357 aaPredicted RBP7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 DYRK1BQ9Y463 629 aa7.41□□□□□ -1.22
PTP4A2-220ENST00000627328 RHOQP17081 205 aa7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 AMPD1P23109 780 aa7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 PTGIRP43119 386 aa7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 PROCA1Q8NCQ7 364 aaPredicted RBP7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 SLC10A4Q96EP9 437 aa7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.22
PTP4A2-220ENST00000627328 BRPF1P55201 1214 aaPredicted RBP7.39□□□□□ -1.23
PTP4A2-220ENST00000627328 CTDSPL2Q05D32 466 aa7.39□□□□□ -1.23
PTP4A2-220ENST00000627328 ZC3H4Q9UPT8 1303 aaKnown RBP7.38□□□□□ -1.23
PTP4A2-220ENST00000627328 RNF144AP50876 292 aaPredicted RBP7.38□□□□□ -1.23
PTP4A2-220ENST00000627328 GOLGA6L1Q8N7Z2 621 aa7.38□□□□□ -1.23
PTP4A2-220ENST00000627328 RSPO4Q2I0M5 234 aaPredicted RBP7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 TMEM259Q4ZIN3 620 aa7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 INTS6LQ5JSJ4 861 aaKnown RBP7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 C1orf229Q6ZS94 237 aaPredicted RBP7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 PNMA1Q8ND90 353 aa7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 KLRG1Q96E93 195 aa7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 CFHR5Q9BXR6 569 aa7.37□□□□□ -1.23
PTP4A2-220ENST00000627328 GAS2L1Q99501 681 aaPredicted RBP7.36□□□□□ -1.23
PTP4A2-220ENST00000627328 AP1G2O75843 785 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 YBX3P16989 372 aaKnown RBP eCLIP7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 HOXB4P17483 251 aaPredicted RBP7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 RFC5P40937 340 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 PDXDC2PQ6P474 469 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 IL27Q8NEV9 243 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 FKBPLQ9UIM3 349 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 PHF24Q9UPV7 400 aa7.35□□□□□ -1.23
PTP4A2-220ENST00000627328 LRP8Q14114 963 aa7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 NKAPLQ5M9Q1 402 aa7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 LRRN4Q8WUT4 740 aa7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 TRIM52Q96A61 297 aa7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 NUCKS1Q9H1E3 243 aaKnown RBP7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 GPSM3Q9Y4H4 160 aa7.34□□□□□ -1.23
PTP4A2-220ENST00000627328 GPC1P35052 558 aa7.33□□□□□ -1.24
PTP4A2-220ENST00000627328 TXKP42681 527 aa7.33□□□□□ -1.24
PTP4A2-220ENST00000627328 FBXO31Q5XUX0 539 aaPredicted RBP7.33□□□□□ -1.24
PTP4A2-220ENST00000627328 ARHGAP9Q9BRR9 750 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms