RNA–Protein interactions for RNA: ENST00000622534.1

GTF3C2-214, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5 BASIC

Gene GTF3C2, Length 1,858 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-214ENST00000622534 PHF23Q9BUL5 403 aaPredicted RBP19.09■□□□□ 0.65
GTF3C2-214ENST00000622534 OVOS2A0A0G2JMS6 1433 aa19.09■□□□□ 0.65
GTF3C2-214ENST00000622534 DISP2A7MBM2 1401 aa19.09■□□□□ 0.65
GTF3C2-214ENST00000622534 PARP4Q9UKK3 1724 aaKnown RBP19.08■□□□□ 0.64
GTF3C2-214ENST00000622534 IL2RBP14784 551 aa19.07■□□□□ 0.64
GTF3C2-214ENST00000622534 MTHFSDQ2M296 383 aaKnown RBP19.07■□□□□ 0.64
GTF3C2-214ENST00000622534 CDCA7Q9BWT1 371 aaPredicted RBP19.07■□□□□ 0.64
GTF3C2-214ENST00000622534 BARGINQ6ZT62 677 aa19.07■□□□□ 0.64
GTF3C2-214ENST00000622534 ATRNO75882 1429 aa19.06■□□□□ 0.64
GTF3C2-214ENST00000622534 PKD1L3Q7Z443 1732 aa19.06■□□□□ 0.64
GTF3C2-214ENST00000622534 ZNF521Q96K83 1311 aa19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 RIPK4P57078 832 aa19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 HTATSF1O43719 755 aaKnown RBP19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 LMOD3Q0VAK6 560 aa19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 SPG7Q9UQ90 795 aa19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 WNK3Q9BYP7 1800 aa19.05■□□□□ 0.64
GTF3C2-214ENST00000622534 TRPC5Q9UL62 973 aaPredicted RBP19.04■□□□□ 0.64
GTF3C2-214ENST00000622534 RRP7AQ9Y3A4 280 aaKnown RBP19.04■□□□□ 0.64
GTF3C2-214ENST00000622534 TRIM35Q9UPQ4 493 aa19.03■□□□□ 0.64
GTF3C2-214ENST00000622534 WWC1Q8IX03 1113 aa19.03■□□□□ 0.64
GTF3C2-214ENST00000622534 USP35Q9P2H5 1018 aa19.03■□□□□ 0.64
GTF3C2-214ENST00000622534 AKAP4Q5JQC9 854 aa19.02■□□□□ 0.64
GTF3C2-214ENST00000622534 PDE3BQ13370 1112 aa19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 NEUROD2Q15784 382 aa19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 ZNF772Q68DY9 489 aaPredicted RBP19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 WDR63Q8IWG1 891 aa19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 CCDC9Q9Y3X0 531 aaKnown RBP19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 MAP3K5Q99683 1374 aa19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 ZNF530Q6P9A1 599 aaPredicted RBP19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 ZCRB1Q8TBF4 217 aaKnown RBP19.01■□□□□ 0.63
GTF3C2-214ENST00000622534 GNAT3A8MTJ3 354 aa19■□□□□ 0.63
GTF3C2-214ENST00000622534 GJD4Q96KN9 370 aaPredicted RBP19■□□□□ 0.63
GTF3C2-214ENST00000622534 SALL2Q9Y467 1007 aaPredicted RBP19■□□□□ 0.63
GTF3C2-214ENST00000622534 DLG5Q8TDM6 1919 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 SENP3-EIF4A1A0A087X0R7 540 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 PCDH11XQ9BZA7 1347 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 PCDH11YQ9BZA8 1340 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 GLI3P10071 1580 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 C1orf141Q5JVX7 400 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 IFNL2Q8IZJ0 200 aa18.99■□□□□ 0.63
GTF3C2-214ENST00000622534 QTRT2Q9H974 415 aaKnown RBP18.98■□□□□ 0.63
GTF3C2-214ENST00000622534 TNS2Q63HR2 1409 aa18.98■□□□□ 0.63
GTF3C2-214ENST00000622534 IL16Q14005 1332 aa18.98■□□□□ 0.63
GTF3C2-214ENST00000622534 ONECUT3O60422 494 aaPredicted RBP18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 PHKG2P15735 406 aa18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 CALD1Q05682 793 aaKnown RBP18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 RTF1Q92541 710 aaKnown RBP18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 SHANK3Q9BYB0 1731 aa18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 ADAMTS7Q9UKP4 1686 aa18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 HSP90AB1P08238 724 aaKnown RBP18.97■□□□□ 0.63
GTF3C2-214ENST00000622534 THSD7AQ9UPZ6 1657 aa18.96■□□□□ 0.63
GTF3C2-214ENST00000622534 EXOC5O00471 708 aa18.96■□□□□ 0.63
GTF3C2-214ENST00000622534 CYP27B1O15528 508 aa18.96■□□□□ 0.63
GTF3C2-214ENST00000622534 GOLGA2Q08379 1002 aa18.96■□□□□ 0.63
GTF3C2-214ENST00000622534 ILDR1Q86SU0 546 aaPredicted RBP18.96■□□□□ 0.63
GTF3C2-214ENST00000622534 CEMIPQ8WUJ3 1361 aa18.95■□□□□ 0.62
GTF3C2-214ENST00000622534 NKX1-1Q15270 411 aaPredicted RBP18.95■□□□□ 0.62
GTF3C2-214ENST00000622534 LRRC37A3O60309 1634 aa18.95■□□□□ 0.62
GTF3C2-214ENST00000622534 FAM98CQ17RN3 349 aaKnown RBP18.94■□□□□ 0.62
GTF3C2-214ENST00000622534 DDB1Q16531 1140 aa18.94■□□□□ 0.62
GTF3C2-214ENST00000622534 IL17REQ8NFR9 667 aa18.94■□□□□ 0.62
GTF3C2-214ENST00000622534 E9PSI1 815 aa18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 MCM10Q7L590 875 aa18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 TRMT2AQ8IZ69 625 aaKnown RBP18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 DCAF5Q96JK2 942 aa18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 RNMTO43148 476 aaKnown RBP18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 SLFN5Q08AF3 891 aa18.92■□□□□ 0.62
GTF3C2-214ENST00000622534 RBM6P78332 1123 aaKnown RBP18.91■□□□□ 0.62
GTF3C2-214ENST00000622534 DCTN1Q14203 1278 aa18.91■□□□□ 0.62
GTF3C2-214ENST00000622534 KDM6AO15550 1401 aaPredicted RBP18.91■□□□□ 0.62
GTF3C2-214ENST00000622534 ZNF853P0CG23 659 aa18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 IFT57Q9NWB7 429 aa18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 BABAM1Q9NWV8 329 aa18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 MPRIPQ6WCQ1 1025 aa18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 DDX54Q8TDD1 881 aaKnown RBP18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 THUMPD2Q9BTF0 503 aaKnown RBP18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 LGR6Q9HBX8 967 aa18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 RGS17Q9UGC6 210 aaPredicted RBP18.9■□□□□ 0.62
GTF3C2-214ENST00000622534 MRC1P22897 1456 aa18.89■□□□□ 0.61
GTF3C2-214ENST00000622534 GNAI1P63096 354 aa18.89■□□□□ 0.61
GTF3C2-214ENST00000622534 CDCA7LQ96GN5 454 aa18.89■□□□□ 0.61
GTF3C2-214ENST00000622534 CFAP44Q96MT7 982 aa18.89■□□□□ 0.61
GTF3C2-214ENST00000622534 SCN11AQ9UI33 1791 aa18.89■□□□□ 0.61
GTF3C2-214ENST00000622534 MYH16Q9H6N6 1097 aa18.88■□□□□ 0.61
GTF3C2-214ENST00000622534 SPINK5Q9NQ38 1064 aaPredicted RBP18.88■□□□□ 0.61
GTF3C2-214ENST00000622534 ERVV-2B6SEH9 535 aa18.87■□□□□ 0.61
GTF3C2-214ENST00000622534 CHL1O00533 1208 aa18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 TAF7Q15545 349 aaPredicted RBP18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 DUSP27Q5VZP5 1158 aa18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 CENPBP07199 599 aaPredicted RBP18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 SEPT12Q8IYM1 358 aa18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 MARCH10Q8NA82 808 aaPredicted RBP18.86■□□□□ 0.61
GTF3C2-214ENST00000622534 TEFQ10587 303 aa18.85■□□□□ 0.61
GTF3C2-214ENST00000622534 SLC52A2Q9HAB3 445 aa18.85■□□□□ 0.61
GTF3C2-214ENST00000622534 BCL9O00512 1426 aa18.85■□□□□ 0.61
GTF3C2-214ENST00000622534 SIPA1L3O60292 1781 aaPredicted RBP18.84■□□□□ 0.61
GTF3C2-214ENST00000622534 RXRBP28702 533 aa18.84■□□□□ 0.61
GTF3C2-214ENST00000622534 VIRMAQ69YN4 1812 aaKnown RBP18.84■□□□□ 0.61
GTF3C2-214ENST00000622534 FANCIQ9NVI1 1328 aa18.83■□□□□ 0.61
GTF3C2-214ENST00000622534 A0A0G2JS52 829 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms