RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 CLIP2Q9UDT6 1046 aa12.53□□□□□ -0.4
CLTCL1-209ENST00000617103 IL1RAPL2Q9NP60 686 aa12.52□□□□□ -0.4
CLTCL1-209ENST00000617103 CDKL5O76039 1030 aa12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 C16orf45Q96MC5 204 aaPredicted RBP12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 CENPHQ9H3R5 247 aa12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 FYB1O15117 783 aa12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 UVSSAQ2YD98 709 aa12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 CCDC158Q5M9N0 1113 aa12.52□□□□□ -0.41
CLTCL1-209ENST00000617103 CCDC83Q8IWF9 413 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 SSH1Q8WYL5 1049 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 CCDC148Q8NFR7 591 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 SHTN1A0MZ66 631 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 ADCY5O95622 1261 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 AACSQ86V21 672 aa12.51□□□□□ -0.41
CLTCL1-209ENST00000617103 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.51□□□□□ -0.416e-6■■■□□ 19.2
CLTCL1-209ENST00000617103 ALDH1L2Q3SY69 923 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 MX1P20591 662 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 DUSP27Q5VZP5 1158 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 EXOC6BQ9Y2D4 811 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 CTDP1Q9Y5B0 961 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 DHX29Q7Z478 1369 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 ANKRD30BQ9BXX2 1392 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 ZRSR2Q15696 482 aaKnown RBP12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 MAP9Q49MG5 647 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 CTNNA3Q9UI47 895 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 POLA1P09884 1462 aaPredicted RBP12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 CTAGE5O15320 804 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 JAKMIP3Q5VZ66 844 aa12.5□□□□□ -0.41
CLTCL1-209ENST00000617103 POLR3GO15318 223 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 BMP2KLQ5H9B9 411 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 GIMAP7Q8NHV1 300 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 NFE2L2Q16236 605 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 DDX11Q96FC9 970 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 SIL1Q9H173 461 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 DDX19AQ9NUU7 478 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 NOL7Q9UMY1 257 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 NEFHP12036 1026 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 RAD54L2Q9Y4B4 1467 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 NAIPQ13075 1403 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 GSDMDP57764 484 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 BMS1Q14692 1282 aaKnown RBP12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 FAM107BQ9H098 131 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 TIAM1Q13009 1591 aa12.49□□□□□ -0.41
CLTCL1-209ENST00000617103 KIF5CO60282 957 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 GTF2F1P35269 517 aaKnown RBP eCLIP12.48□□□□□ -0.413e-8■■■■■ 161.7
CLTCL1-209ENST00000617103 SYCP1Q15431 976 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 TTC39AQ5SRH9 613 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 NLRP2Q9NX02 1062 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 GLRX3O76003 335 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 SLC3A2P08195 630 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 KIF4BQ2VIQ3 1234 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 PRAM1Q96QH2 718 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 LIMCH1Q9UPQ0 1083 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 MTMR7Q9Y216 660 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 MCM3P25205 808 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 CASQ1P31415 396 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 TRERF1Q96PN7 1200 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 EHBP1L1Q8N3D4 1523 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 CCDC69A6NI79 296 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 SPDYE4A6NLX3 237 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 TOP1P11387 765 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 ZSCAN23Q3MJ62 389 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 KIF1BPQ96EK5 621 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 NACAP1Q9BZK3 213 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 TRMT1Q9NXH9 659 aaKnown RBP12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 PAXBP1Q9Y5B6 917 aa12.48□□□□□ -0.41
CLTCL1-209ENST00000617103 TAX1BP1Q86VP1 789 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 ABCC11Q96J66 1382 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 C9orf84Q5VXU9 1444 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 KRT18P05783 430 aaKnown RBP12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 LRSAM1Q6UWE0 723 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 INCENPQ9NQS7 918 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 CKAP2LQ8IYA6 745 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 PANK2Q9BZ23 570 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 TANGO6Q9C0B7 1094 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 NCOA1Q15788 1441 aa12.47□□□□□ -0.41
CLTCL1-209ENST00000617103 CAVIN2O95810 425 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 EIF5P55010 431 aaKnown RBP12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 STK11IPQ8N1F8 1099 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 TBC1D9Q6ZT07 1266 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 NUTM1Q86Y26 1132 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 SYTL4Q96C24 671 aaPredicted RBP12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 TIGD1Q96MW7 591 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 GDPD2Q9HCC8 539 aa12.46□□□□□ -0.41
CLTCL1-209ENST00000617103 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.42
CLTCL1-209ENST00000617103 RAB11FIP3O75154 756 aa12.46□□□□□ -0.42
CLTCL1-209ENST00000617103 IGHDP01880 384 aa12.46□□□□□ -0.42
CLTCL1-209ENST00000617103 ZNF692Q9BU19 519 aaPredicted RBP12.46□□□□□ -0.42
CLTCL1-209ENST00000617103 GPRASP1Q5JY77 1395 aa12.46□□□□□ -0.42
CLTCL1-209ENST00000617103 SEPT7Q16181 437 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 ENOX2Q16206 610 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 IMMTQ16891 758 aaKnown RBP12.45□□□□□ -0.42
CLTCL1-209ENST00000617103 ZSCAN25Q6NSZ9 544 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms