RNA–Protein interactions for RNA: ENST00000607494.5

LINC00458-206, long intergenic non-protein coding RNA 458, humanhuman

TSL 3 BASIC

Gene LINC00458, Length 849 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-206ENST00000607494 MEN1O00255 615 aa11.67□□□□□ -0.54
LINC00458-206ENST00000607494 LYSMD3Q7Z3D4 306 aa11.67□□□□□ -0.54
LINC00458-206ENST00000607494 ERVK-9P63128 1117 aa11.66□□□□□ -0.54
LINC00458-206ENST00000607494 CC2D2BQ6DHV5 1058 aa11.65□□□□□ -0.54
LINC00458-206ENST00000607494 PCDHB11Q9Y5F2 797 aa11.65□□□□□ -0.54
LINC00458-206ENST00000607494 A0A1W2PRU2 124 aa11.64□□□□□ -0.55
LINC00458-206ENST00000607494 SV2AQ7L0J3 742 aa11.64□□□□□ -0.55
LINC00458-206ENST00000607494 RNF144AP50876 292 aaPredicted RBP11.63□□□□□ -0.55
LINC00458-206ENST00000607494 WHAMMQ8TF30 809 aa11.63□□□□□ -0.55
LINC00458-206ENST00000607494 TBC1D2BQ9UPU7 963 aa11.62□□□□□ -0.55
LINC00458-206ENST00000607494 OSBPL3Q9H4L5 887 aa11.61□□□□□ -0.55
LINC00458-206ENST00000607494 RAB6BQ9NRW1 208 aa11.61□□□□□ -0.55
LINC00458-206ENST00000607494 SOCS7O14512 581 aa11.6□□□□□ -0.55
LINC00458-206ENST00000607494 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
LINC00458-206ENST00000607494 ZNF385CQ66K41 422 aaPredicted RBP11.6□□□□□ -0.55
LINC00458-206ENST00000607494 ARHGEF10LQ9HCE6 1279 aa11.6□□□□□ -0.55
LINC00458-206ENST00000607494 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
LINC00458-206ENST00000607494 GAS6Q14393 721 aa11.58□□□□□ -0.56
LINC00458-206ENST00000607494 CCDC85AQ96PX6 553 aaPredicted RBP11.58□□□□□ -0.56
LINC00458-206ENST00000607494 POU4F2Q12837 409 aa11.57□□□□□ -0.56
LINC00458-206ENST00000607494 CYP2U1Q7Z449 544 aa11.57□□□□□ -0.56
LINC00458-206ENST00000607494 SVOPQ8N4V2 548 aa11.57□□□□□ -0.56
LINC00458-206ENST00000607494 ZNF330Q9Y3S2 320 aaPredicted RBP11.57□□□□□ -0.56
LINC00458-206ENST00000607494 GPR25O00155 361 aa11.56□□□□□ -0.56
LINC00458-206ENST00000607494 TRAK2O60296 914 aa11.56□□□□□ -0.56
LINC00458-206ENST00000607494 GSK3AP49840 483 aa11.56□□□□□ -0.56
LINC00458-206ENST00000607494 ZNF837Q96EG3 531 aaPredicted RBP11.56□□□□□ -0.56
LINC00458-206ENST00000607494 GPC1P35052 558 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 MCCD1P59942 119 aaPredicted RBP11.55□□□□□ -0.56
LINC00458-206ENST00000607494 CLN3Q13286 438 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 NLRP3Q96P20 1036 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 CEP126Q9P2H0 1117 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 ADAMTS8Q9UP79 889 aa11.55□□□□□ -0.56
LINC00458-206ENST00000607494 SLURP2P0DP57 97 aa11.54□□□□□ -0.56
LINC00458-206ENST00000607494 IRF5Q13568 498 aa11.54□□□□□ -0.56
LINC00458-206ENST00000607494 RIPOR1Q6ZS17 1223 aa11.54□□□□□ -0.56
LINC00458-206ENST00000607494 APBB1O00213 710 aa11.53□□□□□ -0.56
LINC00458-206ENST00000607494 ADAMTS2O95450 1211 aa11.53□□□□□ -0.56
LINC00458-206ENST00000607494 TSGA10IPQ3SY00 556 aa11.53□□□□□ -0.56
LINC00458-206ENST00000607494 GAS2L1Q99501 681 aaPredicted RBP11.53□□□□□ -0.56
LINC00458-206ENST00000607494 GRIP2Q9C0E4 1043 aa11.53□□□□□ -0.56
LINC00458-206ENST00000607494 STAU1O95793 577 aaKnown RBP11.52□□□□□ -0.57
LINC00458-206ENST00000607494 IL2RAP01589 272 aa11.52□□□□□ -0.57
LINC00458-206ENST00000607494 DBN1Q16643 649 aa11.52□□□□□ -0.57
LINC00458-206ENST00000607494 CCDC125Q86Z20 511 aa11.52□□□□□ -0.57
LINC00458-206ENST00000607494 TRIM52Q96A61 297 aa11.52□□□□□ -0.57
LINC00458-206ENST00000607494 NBPF10Q6P3W6 841 aaKnown RBP11.51□□□□□ -0.57
LINC00458-206ENST00000607494 NBPF15Q8N660 670 aa11.51□□□□□ -0.57
LINC00458-206ENST00000607494 LYPD4Q6UWN0 246 aa11.5□□□□□ -0.57
LINC00458-206ENST00000607494 TRIM22Q8IYM9 498 aa11.5□□□□□ -0.57
LINC00458-206ENST00000607494 ZNF592Q92610 1267 aa11.5□□□□□ -0.57
LINC00458-206ENST00000607494 ARHGEF15O94989 841 aa11.49□□□□□ -0.57
LINC00458-206ENST00000607494 VAC14Q08AM6 782 aa11.49□□□□□ -0.57
LINC00458-206ENST00000607494 KCNMA1Q12791 1236 aa11.49□□□□□ -0.57
LINC00458-206ENST00000607494 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
LINC00458-206ENST00000607494 DYRK1BQ9Y463 629 aa11.49□□□□□ -0.57
LINC00458-206ENST00000607494 CNKSR1Q969H4 720 aa11.48□□□□□ -0.57
LINC00458-206ENST00000607494 GTPBP3Q969Y2 492 aaKnown RBP11.48□□□□□ -0.57
LINC00458-206ENST00000607494 GDPD2Q9HCC8 539 aa11.48□□□□□ -0.57
LINC00458-206ENST00000607494 SPATA31C2B4DYI2 1134 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 WASLO00401 505 aaPredicted RBP11.46□□□□□ -0.57
LINC00458-206ENST00000607494 GNRH1P01148 92 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 PHKA2P46019 1235 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 CENPCQ03188 943 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 SRSF11Q05519 484 aaKnown RBP11.46□□□□□ -0.57
LINC00458-206ENST00000607494 KCTD17Q8N5Z5 321 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 ESYT1Q9BSJ8 1104 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 TIMMDC1Q9NPL8 285 aa11.46□□□□□ -0.57
LINC00458-206ENST00000607494 MYCP01106 439 aaPredicted RBP11.45□□□□□ -0.58
LINC00458-206ENST00000607494 ABL2P42684 1182 aa11.45□□□□□ -0.58
LINC00458-206ENST00000607494 TAS1R3Q7RTX0 852 aa11.45□□□□□ -0.58
LINC00458-206ENST00000607494 PHTF2Q8N3S3 785 aa11.45□□□□□ -0.58
LINC00458-206ENST00000607494 GPAMQ9HCL2 828 aa11.45□□□□□ -0.58
LINC00458-206ENST00000607494 THBS1P07996 1170 aa11.44□□□□□ -0.58
LINC00458-206ENST00000607494 RASSF7Q02833 373 aa11.44□□□□□ -0.58
LINC00458-206ENST00000607494 OXLD1Q5BKU9 147 aa11.44□□□□□ -0.58
LINC00458-206ENST00000607494 DOLKQ9UPQ8 538 aa11.44□□□□□ -0.58
LINC00458-206ENST00000607494 HRH3Q9Y5N1 445 aa11.44□□□□□ -0.58
LINC00458-206ENST00000607494 CELA2BP08218 269 aaPredicted RBP11.43□□□□□ -0.58
LINC00458-206ENST00000607494 EIF4G2P78344 907 aaKnown RBP eCLIP11.43□□□□□ -0.58
LINC00458-206ENST00000607494 RNF135Q8IUD6 432 aa11.43□□□□□ -0.58
LINC00458-206ENST00000607494 MBIPQ9NS73 344 aa11.43□□□□□ -0.58
LINC00458-206ENST00000607494 IGF1RP08069 1367 aa11.42□□□□□ -0.58
LINC00458-206ENST00000607494 SLFNL1Q499Z3 407 aa11.42□□□□□ -0.58
LINC00458-206ENST00000607494 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
LINC00458-206ENST00000607494 ETNK1Q9HBU6 452 aa11.42□□□□□ -0.58
LINC00458-206ENST00000607494 ZSCAN10Q96SZ4 725 aaPredicted RBP11.41□□□□□ -0.58
LINC00458-206ENST00000607494 H7C1W4 665 aa11.4□□□□□ -0.58
LINC00458-206ENST00000607494 GDF11O95390 407 aa11.4□□□□□ -0.58
LINC00458-206ENST00000607494 IRS1P35568 1242 aa11.4□□□□□ -0.58
LINC00458-206ENST00000607494 XAGE2Q96GT9 111 aa11.4□□□□□ -0.58
LINC00458-206ENST00000607494 GMCL1Q96IK5 515 aa11.4□□□□□ -0.58
LINC00458-206ENST00000607494 NUCKS1Q9H1E3 243 aaKnown RBP11.4□□□□□ -0.58
LINC00458-206ENST00000607494 F11P03951 625 aa11.39□□□□□ -0.59
LINC00458-206ENST00000607494 MCM6Q14566 821 aa11.39□□□□□ -0.59
LINC00458-206ENST00000607494 C4orf17Q53FE4 359 aa11.39□□□□□ -0.59
LINC00458-206ENST00000607494 TMEM151AQ8N4L1 468 aa11.39□□□□□ -0.59
LINC00458-206ENST00000607494 PRM3Q9NNZ6 103 aa11.39□□□□□ -0.59
LINC00458-206ENST00000607494 RNF225M0QZC1 329 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms