RNA–Protein interactions for RNA: ENST00000606769.1

SNORA28-201, Transcript of small nucleolar RNA, H/ACA box 28, humanhuman

BASIC

Gene SNORA28, Length 126 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA28-201ENST00000606769 RETREG2Q8NC44 543 aa3.24□□□□□ -1.89
SNORA28-201ENST00000606769 HRH3Q9Y5N1 445 aa3.24□□□□□ -1.89
SNORA28-201ENST00000606769 FAM196BA6NMK8 535 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L15C9J2P7 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L10C9JJH3 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L13C9JLJ4 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L12C9JPN9 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L11C9JVI0 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L21D6R901 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L18D6R9N7 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L22D6RA61 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L17D6RBQ6 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L19D6RCP7 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L20D6RJB6 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 LZTS3O60299 673 aaPredicted RBP3.23□□□□□ -1.89
SNORA28-201ENST00000606769 PPP1R15AO75807 674 aaPredicted RBP3.23□□□□□ -1.89
SNORA28-201ENST00000606769 ZIC2O95409 532 aaPredicted RBP3.23□□□□□ -1.89
SNORA28-201ENST00000606769 GTF2IP78347 998 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 USP17L24Q0WX57 530 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 ELOAQ14241 798 aaKnown RBP3.23□□□□□ -1.89
SNORA28-201ENST00000606769 EML3Q32P44 896 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 TMEM164Q5U3C3 297 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 RNF20Q5VTR2 975 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 CC2D2BQ6DHV5 1058 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 ZNF295-AS1Q8N0V1 137 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 CYP4X1Q8N118 509 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 SIX5Q8N196 739 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 OGFOD1Q8N543 542 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 VRTNQ9H8Y1 702 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 ETNK1Q9HBU6 452 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 PDZRN3Q9UPQ7 1066 aa3.23□□□□□ -1.89
SNORA28-201ENST00000606769 TTC24A2A3L6 582 aaPredicted RBP3.22□□□□□ -1.89
SNORA28-201ENST00000606769 SFI1A8K8P3 1242 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 IL2RAP01589 272 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 EPHA4P54764 986 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 WDR4P57081 412 aaKnown RBP3.22□□□□□ -1.89
SNORA28-201ENST00000606769 PHLDB3Q6NSJ2 640 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 MEIOBQ8N635 442 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 GAS2L2Q8NHY3 880 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 ZNF592Q92610 1267 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 AGBL1Q96MI9 1066 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 DACH1Q9UI36 760 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 NOVA2Q9UNW9 492 aaKnown RBP3.22□□□□□ -1.89
SNORA28-201ENST00000606769 EMILIN1Q9Y6C2 1016 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 USP3Q9Y6I4 520 aa3.22□□□□□ -1.89
SNORA28-201ENST00000606769 ATP5J2-PTCD1G3V325 749 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 NRG2O14511 850 aaPredicted RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 LGR5O75473 907 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 ADH1AP07327 375 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 RASA1P20936 1047 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 MYT1Q01538 1121 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 DHX9Q08211 1270 aaKnown RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 DPYDQ12882 1025 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 USP4Q13107 963 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 TRIM46Q7Z4K8 759 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 CCDC125Q86Z20 511 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 ANKMY2Q8IV38 441 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 LARGE2Q8N3Y3 721 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 SERBP1Q8NC51 408 aaKnown RBP eCLIP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 ZNF594Q96JF6 807 aaPredicted RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 PURBQ96QR8 312 aaKnown RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 FHDC1Q9C0D6 1143 aaPredicted RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 RAB6BQ9NRW1 208 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 DNAAF2Q9NVR5 837 aaKnown RBP3.21□□□□□ -1.9
SNORA28-201ENST00000606769 ZNF358Q9NW07 568 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 NOD1Q9Y239 953 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 WASF2Q9Y6W5 498 aa3.21□□□□□ -1.9
SNORA28-201ENST00000606769 FAM187AA6NFU0 413 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 WASLO00401 505 aaPredicted RBP3.2□□□□□ -1.9
SNORA28-201ENST00000606769 ST8SIA5O15466 376 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 C21orf2O43822 256 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 GFRA3O60609 400 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 INHAP05111 366 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 SCNN1AP37088 669 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 PTGIRP43119 386 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 SMCPP49901 116 aaPredicted RBP3.2□□□□□ -1.9
SNORA28-201ENST00000606769 FOXK2Q01167 660 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 MTFR1Q15390 333 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 OCLNQ16625 522 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 FOXD4L5Q5VV16 416 aaPredicted RBP3.2□□□□□ -1.9
SNORA28-201ENST00000606769 CCDC102BQ68D86 513 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 CRIPAKQ8N1N5 446 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 TSEN2Q8NCE0 465 aaKnown RBP3.2□□□□□ -1.9
SNORA28-201ENST00000606769 TPCN2Q8NHX9 752 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 XAGE2Q96GT9 111 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 SLC4A9Q96Q91 983 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 ARHGEF10LQ9HCE6 1279 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 AAASQ9NRG9 546 aa3.2□□□□□ -1.9
SNORA28-201ENST00000606769 IQSEC3Q9UPP2 1182 aaPredicted RBP3.2□□□□□ -1.9
SNORA28-201ENST00000606769 A0A1W2PRU2 124 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 CAPN5O15484 640 aaPredicted RBP3.19□□□□□ -1.9
SNORA28-201ENST00000606769 SPINT1O43278 529 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 BMP1P13497 986 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 GDF10P55107 478 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 POTEAQ6S8J7 498 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 CAPN12Q6ZSI9 719 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 TRIM50Q86XT4 487 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 TRAIPQ9BWF2 469 aa3.19□□□□□ -1.9
SNORA28-201ENST00000606769 ZNF395Q9H8N7 513 aaPredicted RBP3.19□□□□□ -1.9
SNORA28-201ENST00000606769 PGPEP1Q9NXJ5 209 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms