RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 MTHFSDQ2M296 383 aaKnown RBP24.34■■□□□ 1.49
SSBP4-212ENST00000601919 UNC5CLQ8IV45 518 aa24.34■■□□□ 1.49
SSBP4-212ENST00000601919 WDR63Q8IWG1 891 aa24.34■■□□□ 1.49
SSBP4-212ENST00000601919 FNBP4Q8N3X1 1017 aaPredicted RBP24.34■■□□□ 1.49
SSBP4-212ENST00000601919 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.34■■□□□ 1.493e-6■■□□□ 13.5
SSBP4-212ENST00000601919 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.33■■□□□ 1.49
SSBP4-212ENST00000601919 CALD1Q05682 793 aaKnown RBP24.33■■□□□ 1.49
SSBP4-212ENST00000601919 GOLGA2Q08379 1002 aa24.33■■□□□ 1.49
SSBP4-212ENST00000601919 SPG7Q9UQ90 795 aa24.33■■□□□ 1.49
SSBP4-212ENST00000601919 HTATSF1O43719 755 aaKnown RBP24.32■■□□□ 1.48
SSBP4-212ENST00000601919 IL2RBP14784 551 aa24.32■■□□□ 1.48
SSBP4-212ENST00000601919 TRIM35Q9UPQ4 493 aa24.32■■□□□ 1.48
SSBP4-212ENST00000601919 RTF1Q92541 710 aaKnown RBP24.31■■□□□ 1.48
SSBP4-212ENST00000601919 THRAP3Q9Y2W1 955 aaKnown RBP24.31■■□□□ 1.48
SSBP4-212ENST00000601919 MEGF6O75095 1541 aa24.3■■□□□ 1.48
SSBP4-212ENST00000601919 PKD1L3Q7Z443 1732 aa24.3■■□□□ 1.48
SSBP4-212ENST00000601919 OVOS2A0A0G2JMS6 1433 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 GNAT3A8MTJ3 354 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 C1orf141Q5JVX7 400 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 ZNF530Q6P9A1 599 aaPredicted RBP24.29■■□□□ 1.48
SSBP4-212ENST00000601919 CDCA7Q9BWT1 371 aaPredicted RBP24.29■■□□□ 1.48
SSBP4-212ENST00000601919 USP35Q9P2H5 1018 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 USP21Q9UK80 565 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 MAP3K5Q99683 1374 aa24.29■■□□□ 1.48
SSBP4-212ENST00000601919 BCL9LQ86UU0 1499 aa24.28■■□□□ 1.48
SSBP4-212ENST00000601919 CCDC9Q9Y3X0 531 aaKnown RBP24.28■■□□□ 1.48
SSBP4-212ENST00000601919 IL16Q14005 1332 aa24.28■■□□□ 1.48
SSBP4-212ENST00000601919 SPATA31A1Q5TZJ5 1347 aa24.28■■□□□ 1.48
SSBP4-212ENST00000601919 WNK3Q9BYP7 1800 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 E9PSI1 815 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 VPS72Q15906 364 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 AKAP4Q5JQC9 854 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 SPATA31A5Q5VU36 1347 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 SPATA31A7Q8IWB4 1347 aa24.27■■□□□ 1.48
SSBP4-212ENST00000601919 AFF2P51816 1311 aa24.25■■□□□ 1.47
SSBP4-212ENST00000601919 ZCRB1Q8TBF4 217 aaKnown RBP24.24■■□□□ 1.47
SSBP4-212ENST00000601919 SLFN5Q08AF3 891 aa24.23■■□□□ 1.47
SSBP4-212ENST00000601919 MYH16Q9H6N6 1097 aa24.23■■□□□ 1.47
SSBP4-212ENST00000601919 DISP2A7MBM2 1401 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 PCDH11XQ9BZA7 1347 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 PCDH11YQ9BZA8 1340 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 HSP90AB1P08238 724 aaKnown RBP24.22■■□□□ 1.47
SSBP4-212ENST00000601919 BARGINQ6ZT62 677 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 IFNL2Q8IZJ0 200 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 CDCA7LQ96GN5 454 aa24.22■■□□□ 1.47
SSBP4-212ENST00000601919 VIRMAQ69YN4 1812 aaKnown RBP24.2■■□□□ 1.46
SSBP4-212ENST00000601919 MCM10Q7L590 875 aa24.2■■□□□ 1.46
SSBP4-212ENST00000601919 TRPC5Q9UL62 973 aaPredicted RBP24.2■■□□□ 1.46
SSBP4-212ENST00000601919 GNAI1P63096 354 aa24.19■■□□□ 1.46
SSBP4-212ENST00000601919 IFT57Q9NWB7 429 aa24.19■■□□□ 1.46
SSBP4-212ENST00000601919 PHKG2P15735 406 aa24.18■■□□□ 1.46
SSBP4-212ENST00000601919 DCTN1Q14203 1278 aa24.18■■□□□ 1.46
SSBP4-212ENST00000601919 TRMT2AQ8IZ69 625 aaKnown RBP24.18■■□□□ 1.46
SSBP4-212ENST00000601919 THUMPD2Q9BTF0 503 aaKnown RBP24.18■■□□□ 1.46
SSBP4-212ENST00000601919 LRRC37A3O60309 1634 aa24.17■■□□□ 1.46
SSBP4-212ENST00000601919 EXOC5O00471 708 aa24.17■■□□□ 1.46
SSBP4-212ENST00000601919 SHANK3Q9BYB0 1731 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 DUSP27Q5VZP5 1158 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 CFAP44Q96MT7 982 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 ATRNO75882 1429 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 SCN11AQ9UI33 1791 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 CEMIPQ8WUJ3 1361 aa24.16■■□□□ 1.46
SSBP4-212ENST00000601919 IL17REQ8NFR9 667 aa24.15■■□□□ 1.46
SSBP4-212ENST00000601919 DCAF5Q96JK2 942 aa24.15■■□□□ 1.46
SSBP4-212ENST00000601919 SPINK5Q9NQ38 1064 aaPredicted RBP24.15■■□□□ 1.46
SSBP4-212ENST00000601919 LAS1LQ9Y4W2 734 aaKnown RBP24.15■■□□□ 1.46
SSBP4-212ENST00000601919 ADAMTS7Q9UKP4 1686 aa24.15■■□□□ 1.46
SSBP4-212ENST00000601919 CYP27B1O15528 508 aa24.14■■□□□ 1.45
SSBP4-212ENST00000601919 RNMTO43148 476 aaKnown RBP24.14■■□□□ 1.45
SSBP4-212ENST00000601919 TNS2Q63HR2 1409 aa24.14■■□□□ 1.45
SSBP4-212ENST00000601919 ZNF772Q68DY9 489 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-212ENST00000601919 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
SSBP4-212ENST00000601919 GJD4Q96KN9 370 aaPredicted RBP24.14■■□□□ 1.45
SSBP4-212ENST00000601919 BABAM1Q9NWV8 329 aa24.14■■□□□ 1.45
SSBP4-212ENST00000601919 TEFQ10587 303 aa24.13■■□□□ 1.45
SSBP4-212ENST00000601919 DDB1Q16531 1140 aa24.13■■□□□ 1.45
SSBP4-212ENST00000601919 ZNF853P0CG23 659 aa24.12■■□□□ 1.45
SSBP4-212ENST00000601919 DDX54Q8TDD1 881 aaKnown RBP24.12■■□□□ 1.45
SSBP4-212ENST00000601919 NKX1-1Q15270 411 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-212ENST00000601919 TAF7Q15545 349 aaPredicted RBP24.11■■□□□ 1.45
SSBP4-212ENST00000601919 FAM98CQ17RN3 349 aaKnown RBP24.11■■□□□ 1.45
SSBP4-212ENST00000601919 QTRT2Q9H974 415 aaKnown RBP24.11■■□□□ 1.45
SSBP4-212ENST00000601919 LGR6Q9HBX8 967 aa24.11■■□□□ 1.45
SSBP4-212ENST00000601919 FANCIQ9NVI1 1328 aa24.1■■□□□ 1.45
SSBP4-212ENST00000601919 CHL1O00533 1208 aa24.1■■□□□ 1.45
SSBP4-212ENST00000601919 GLI3P10071 1580 aa24.09■■□□□ 1.45
SSBP4-212ENST00000601919 TSR2Q969E8 191 aaKnown RBP24.08■■□□□ 1.45
SSBP4-212ENST00000601919 TSPYL4Q9UJ04 414 aa24.08■■□□□ 1.45
SSBP4-212ENST00000601919 KDM6AO15550 1401 aaPredicted RBP24.08■■□□□ 1.44
SSBP4-212ENST00000601919 SIPA1L3O60292 1781 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-212ENST00000601919 CT47B1P0C2W7 299 aaPredicted RBP24.07■■□□□ 1.44
SSBP4-212ENST00000601919 MBIPQ9NS73 344 aa24.07■■□□□ 1.44
SSBP4-212ENST00000601919 THSD7AQ9UPZ6 1657 aa24.06■■□□□ 1.44
SSBP4-212ENST00000601919 A0A0G2JS52 829 aa24.06■■□□□ 1.44
SSBP4-212ENST00000601919 ERVV-2B6SEH9 535 aa24.06■■□□□ 1.44
SSBP4-212ENST00000601919 MYT1Q01538 1121 aa24.06■■□□□ 1.44
SSBP4-212ENST00000601919 MRC1P22897 1456 aa24.05■■□□□ 1.44
SSBP4-212ENST00000601919 CABP4P57796 275 aa24.04■■□□□ 1.44
SSBP4-212ENST00000601919 SLC52A2Q9HAB3 445 aa24.04■■□□□ 1.44
SSBP4-212ENST00000601919 BTBD11A6QL63 1104 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms