RNA–Protein interactions for RNA: ENST00000595112.5

KHSRP-204, Transcript of KH-type splicing regulatory protein, humanhuman

TSL 3

Gene KHSRP, Length 745 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-204ENST00000595112 RRP7AQ9Y3A4 280 aaKnown RBP20.84■□□□□ 0.93
KHSRP-204ENST00000595112 SALL2Q9Y467 1007 aaPredicted RBP20.84■□□□□ 0.93
KHSRP-204ENST00000595112 NEUROD2Q15784 382 aa20.83■□□□□ 0.93
KHSRP-204ENST00000595112 PLEKHO1Q53GL0 409 aaPredicted RBP20.83■□□□□ 0.93
KHSRP-204ENST00000595112 OVOS2A0A0G2JMS6 1433 aa20.83■□□□□ 0.93
KHSRP-204ENST00000595112 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.92
KHSRP-204ENST00000595112 BCL9LQ86UU0 1499 aa20.82■□□□□ 0.92
KHSRP-204ENST00000595112 SENP3-EIF4A1A0A087X0R7 540 aa20.82■□□□□ 0.92
KHSRP-204ENST00000595112 UNC5CLQ8IV45 518 aa20.82■□□□□ 0.92
KHSRP-204ENST00000595112 WWC1Q8IX03 1113 aa20.82■□□□□ 0.92
KHSRP-204ENST00000595112 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.82■□□□□ 0.92
KHSRP-204ENST00000595112 LRRC37A3O60309 1634 aa20.82■□□□□ 0.92
KHSRP-204ENST00000595112 MTHFSDQ2M296 383 aaKnown RBP20.81■□□□□ 0.92
KHSRP-204ENST00000595112 IL2RBP14784 551 aa20.8■□□□□ 0.92
KHSRP-204ENST00000595112 WDR63Q8IWG1 891 aa20.8■□□□□ 0.92
KHSRP-204ENST00000595112 THRAP3Q9Y2W1 955 aaKnown RBP20.8■□□□□ 0.92
KHSRP-204ENST00000595112 SCN11AQ9UI33 1791 aa20.8■□□□□ 0.92
KHSRP-204ENST00000595112 HTATSF1O43719 755 aaKnown RBP20.79■□□□□ 0.92
KHSRP-204ENST00000595112 TRIM35Q9UPQ4 493 aa20.79■□□□□ 0.92
KHSRP-204ENST00000595112 SPG7Q9UQ90 795 aa20.79■□□□□ 0.92
KHSRP-204ENST00000595112 MAP3K5Q99683 1374 aa20.79■□□□□ 0.92
KHSRP-204ENST00000595112 ADAMTS7Q9UKP4 1686 aa20.79■□□□□ 0.92
KHSRP-204ENST00000595112 SPATA31A1Q5TZJ5 1347 aa20.78■□□□□ 0.92
KHSRP-204ENST00000595112 DISP2A7MBM2 1401 aa20.78■□□□□ 0.92
KHSRP-204ENST00000595112 CALD1Q05682 793 aaKnown RBP20.78■□□□□ 0.92
KHSRP-204ENST00000595112 GOLGA2Q08379 1002 aa20.78■□□□□ 0.92
KHSRP-204ENST00000595112 SPATA31A5Q5VU36 1347 aa20.78■□□□□ 0.92
KHSRP-204ENST00000595112 SPATA31A7Q8IWB4 1347 aa20.78■□□□□ 0.92
KHSRP-204ENST00000595112 VPS72Q15906 364 aa20.77■□□□□ 0.92
KHSRP-204ENST00000595112 CDCA7Q9BWT1 371 aaPredicted RBP20.77■□□□□ 0.92
KHSRP-204ENST00000595112 USP21Q9UK80 565 aa20.77■□□□□ 0.92
KHSRP-204ENST00000595112 GNAT3A8MTJ3 354 aa20.76■□□□□ 0.91
KHSRP-204ENST00000595112 AKAP4Q5JQC9 854 aa20.76■□□□□ 0.91
KHSRP-204ENST00000595112 C1orf141Q5JVX7 400 aa20.76■□□□□ 0.91
KHSRP-204ENST00000595112 ZNF530Q6P9A1 599 aaPredicted RBP20.76■□□□□ 0.91
KHSRP-204ENST00000595112 RTF1Q92541 710 aaKnown RBP20.76■□□□□ 0.91
KHSRP-204ENST00000595112 AFF2P51816 1311 aa20.76■□□□□ 0.91
KHSRP-204ENST00000595112 IL16Q14005 1332 aa20.76■□□□□ 0.91
KHSRP-204ENST00000595112 USP35Q9P2H5 1018 aa20.75■□□□□ 0.91
KHSRP-204ENST00000595112 E9PSI1 815 aa20.74■□□□□ 0.91
KHSRP-204ENST00000595112 SIPA1L3O60292 1781 aaPredicted RBP20.74■□□□□ 0.91
KHSRP-204ENST00000595112 PCDH11XQ9BZA7 1347 aa20.74■□□□□ 0.91
KHSRP-204ENST00000595112 PCDH11YQ9BZA8 1340 aa20.74■□□□□ 0.91
KHSRP-204ENST00000595112 BARGINQ6ZT62 677 aa20.73■□□□□ 0.91
KHSRP-204ENST00000595112 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
KHSRP-204ENST00000595112 ATRNO75882 1429 aa20.72■□□□□ 0.91
KHSRP-204ENST00000595112 TNS2Q63HR2 1409 aa20.72■□□□□ 0.91
KHSRP-204ENST00000595112 ZCRB1Q8TBF4 217 aaKnown RBP20.72■□□□□ 0.91
KHSRP-204ENST00000595112 THSD7AQ9UPZ6 1657 aa20.71■□□□□ 0.91
KHSRP-204ENST00000595112 IFNL2Q8IZJ0 200 aa20.71■□□□□ 0.91
KHSRP-204ENST00000595112 GLI3P10071 1580 aa20.71■□□□□ 0.91
KHSRP-204ENST00000595112 HSP90AB1P08238 724 aaKnown RBP20.7■□□□□ 0.9
KHSRP-204ENST00000595112 SLFN5Q08AF3 891 aa20.7■□□□□ 0.9
KHSRP-204ENST00000595112 TRPC5Q9UL62 973 aaPredicted RBP20.7■□□□□ 0.9
KHSRP-204ENST00000595112 CEMIPQ8WUJ3 1361 aa20.7■□□□□ 0.9
KHSRP-204ENST00000595112 PHKG2P15735 406 aa20.69■□□□□ 0.9
KHSRP-204ENST00000595112 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
KHSRP-204ENST00000595112 TRMT2AQ8IZ69 625 aaKnown RBP20.68■□□□□ 0.9
KHSRP-204ENST00000595112 CDCA7LQ96GN5 454 aa20.68■□□□□ 0.9
KHSRP-204ENST00000595112 IFT57Q9NWB7 429 aa20.68■□□□□ 0.9
KHSRP-204ENST00000595112 GNAI1P63096 354 aa20.67■□□□□ 0.9
KHSRP-204ENST00000595112 MCM10Q7L590 875 aa20.67■□□□□ 0.9
KHSRP-204ENST00000595112 MRC1P22897 1456 aa20.67■□□□□ 0.9
KHSRP-204ENST00000595112 KDM3BQ7LBC6 1761 aa20.67■□□□□ 0.9
KHSRP-204ENST00000595112 CYP27B1O15528 508 aa20.66■□□□□ 0.9
KHSRP-204ENST00000595112 DCTN1Q14203 1278 aa20.66■□□□□ 0.9
KHSRP-204ENST00000595112 DUSP27Q5VZP5 1158 aa20.66■□□□□ 0.9
KHSRP-204ENST00000595112 EXOC5O00471 708 aa20.65■□□□□ 0.9
KHSRP-204ENST00000595112 ZNF772Q68DY9 489 aaPredicted RBP20.65■□□□□ 0.9
KHSRP-204ENST00000595112 DCAF5Q96JK2 942 aa20.65■□□□□ 0.9
KHSRP-204ENST00000595112 CFAP44Q96MT7 982 aa20.65■□□□□ 0.9
KHSRP-204ENST00000595112 THUMPD2Q9BTF0 503 aaKnown RBP20.65■□□□□ 0.9
KHSRP-204ENST00000595112 ITGB4P16144 1822 aa20.64■□□□□ 0.9
KHSRP-204ENST00000595112 TOGARAM1Q9Y4F4 1720 aa20.64■□□□□ 0.9
KHSRP-204ENST00000595112 KDM6AO15550 1401 aaPredicted RBP20.64■□□□□ 0.89
KHSRP-204ENST00000595112 RNMTO43148 476 aaKnown RBP20.64■□□□□ 0.89
KHSRP-204ENST00000595112 IL17REQ8NFR9 667 aa20.64■□□□□ 0.89
KHSRP-204ENST00000595112 GJD4Q96KN9 370 aaPredicted RBP20.64■□□□□ 0.89
KHSRP-204ENST00000595112 SPINK5Q9NQ38 1064 aaPredicted RBP20.64■□□□□ 0.89
KHSRP-204ENST00000595112 ZNF853P0CG23 659 aa20.63■□□□□ 0.89
KHSRP-204ENST00000595112 NKX1-1Q15270 411 aaPredicted RBP20.63■□□□□ 0.89
KHSRP-204ENST00000595112 DDB1Q16531 1140 aa20.63■□□□□ 0.89
KHSRP-204ENST00000595112 BABAM1Q9NWV8 329 aa20.63■□□□□ 0.89
KHSRP-204ENST00000595112 FANCIQ9NVI1 1328 aa20.62■□□□□ 0.89
KHSRP-204ENST00000595112 TEFQ10587 303 aa20.62■□□□□ 0.89
KHSRP-204ENST00000595112 FAM98CQ17RN3 349 aaKnown RBP20.62■□□□□ 0.89
KHSRP-204ENST00000595112 MPRIPQ6WCQ1 1025 aa20.62■□□□□ 0.89
KHSRP-204ENST00000595112 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
KHSRP-204ENST00000595112 DOT1LQ8TEK3 1739 aa20.61■□□□□ 0.89
KHSRP-204ENST00000595112 QTRT2Q9H974 415 aaKnown RBP20.61■□□□□ 0.89
KHSRP-204ENST00000595112 TAF7Q15545 349 aaPredicted RBP20.6■□□□□ 0.89
KHSRP-204ENST00000595112 DDX54Q8TDD1 881 aaKnown RBP20.6■□□□□ 0.89
KHSRP-204ENST00000595112 LGR6Q9HBX8 967 aa20.6■□□□□ 0.89
KHSRP-204ENST00000595112 LAS1LQ9Y4W2 734 aaKnown RBP20.6■□□□□ 0.89
KHSRP-204ENST00000595112 CHL1O00533 1208 aa20.59■□□□□ 0.89
KHSRP-204ENST00000595112 PAPPAQ13219 1627 aa20.58■□□□□ 0.89
KHSRP-204ENST00000595112 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
KHSRP-204ENST00000595112 ERVV-2B6SEH9 535 aa20.57■□□□□ 0.88
KHSRP-204ENST00000595112 ONECUT3O60422 494 aaPredicted RBP20.57■□□□□ 0.88
KHSRP-204ENST00000595112 CT47B1P0C2W7 299 aaPredicted RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms