RNA–Protein interactions for RNA: ENST00000590959.5

SPHK1-207, Transcript of sphingosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPHK1, Length 1,851 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-207ENST00000590959 STRN4Q9NRL3 753 aa25.17■■□□□ 1.62
SPHK1-207ENST00000590959 COL5A2P05997 1499 aaPredicted RBP25.17■■□□□ 1.62
SPHK1-207ENST00000590959 ABCC6O95255 1503 aa25.17■■□□□ 1.62
SPHK1-207ENST00000590959 ILDR1Q86SU0 546 aaPredicted RBP25.17■■□□□ 1.62
SPHK1-207ENST00000590959 NGLY1Q96IV0 654 aa25.17■■□□□ 1.62
SPHK1-207ENST00000590959 PLCH1Q4KWH8 1693 aa25.17■■□□□ 1.62
SPHK1-207ENST00000590959 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
SPHK1-207ENST00000590959 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
SPHK1-207ENST00000590959 MEX3CQ5U5Q3 659 aaKnown RBP25.15■■□□□ 1.62
SPHK1-207ENST00000590959 USHBP1Q8N6Y0 703 aa25.15■■□□□ 1.62
SPHK1-207ENST00000590959 SLIT2O94813 1529 aa25.14■■□□□ 1.62
SPHK1-207ENST00000590959 LARP1Q6PKG0 1096 aaKnown RBP25.14■■□□□ 1.61
SPHK1-207ENST00000590959 B4GALNT3Q6L9W6 998 aa25.13■■□□□ 1.61
SPHK1-207ENST00000590959 CSB-PGBD3P0DP91 1061 aa25.13■■□□□ 1.61
SPHK1-207ENST00000590959 EVA1CP58658 441 aa25.13■■□□□ 1.61
SPHK1-207ENST00000590959 FNBP4Q8N3X1 1017 aaPredicted RBP25.11■■□□□ 1.61
SPHK1-207ENST00000590959 WDR17Q8IZU2 1322 aa25.11■■□□□ 1.61
SPHK1-207ENST00000590959 TSR2Q969E8 191 aaKnown RBP25.11■■□□□ 1.61
SPHK1-207ENST00000590959 BCL9LQ86UU0 1499 aa25.1■■□□□ 1.61
SPHK1-207ENST00000590959 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.1■■□□□ 1.61
SPHK1-207ENST00000590959 GAS2L2Q8NHY3 880 aa25.1■■□□□ 1.61
SPHK1-207ENST00000590959 NLRP2Q9NX02 1062 aa25.1■■□□□ 1.61
SPHK1-207ENST00000590959 DLG5Q8TDM6 1919 aa25.1■■□□□ 1.61
SPHK1-207ENST00000590959 NRAPQ86VF7 1730 aa25.1■■□□□ 1.61
SPHK1-207ENST00000590959 CT47B1P0C2W7 299 aaPredicted RBP25.09■■□□□ 1.61
SPHK1-207ENST00000590959 MTHFSDQ2M296 383 aaKnown RBP25.09■■□□□ 1.61
SPHK1-207ENST00000590959 THUMPD2Q9BTF0 503 aaKnown RBP25.09■■□□□ 1.61
SPHK1-207ENST00000590959 GNAI1P63096 354 aa25.08■■□□□ 1.61
SPHK1-207ENST00000590959 TOM1L2Q6ZVM7 507 aa25.08■■□□□ 1.61
SPHK1-207ENST00000590959 IFT57Q9NWB7 429 aa25.08■■□□□ 1.61
SPHK1-207ENST00000590959 NWD2Q9ULI1 1742 aa25.08■■□□□ 1.6
SPHK1-207ENST00000590959 AFF2P51816 1311 aa25.07■■□□□ 1.6
SPHK1-207ENST00000590959 PLIN1O60240 522 aa25.07■■□□□ 1.6
SPHK1-207ENST00000590959 USP35Q9P2H5 1018 aa25.07■■□□□ 1.6
SPHK1-207ENST00000590959 UNC5CLQ8IV45 518 aa25.06■■□□□ 1.6
SPHK1-207ENST00000590959 USP21Q9UK80 565 aa25.06■■□□□ 1.6
SPHK1-207ENST00000590959 LAS1LQ9Y4W2 734 aaKnown RBP25.06■■□□□ 1.6
SPHK1-207ENST00000590959 EXOSC9Q06265 439 aaKnown RBP25.05■■□□□ 1.6
SPHK1-207ENST00000590959 DCTN1Q14203 1278 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 CCDC136Q96JN2 1154 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 CFAP44Q96MT7 982 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 BCAR3O75815 825 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 ZNF853P0CG23 659 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 RARSP54136 660 aaKnown RBP25.04■■□□□ 1.6
SPHK1-207ENST00000590959 RTF1Q92541 710 aaKnown RBP25.04■■□□□ 1.6
SPHK1-207ENST00000590959 NCAPD2Q15021 1401 aa25.04■■□□□ 1.6
SPHK1-207ENST00000590959 FAM208AQ9UK61 1670 aaKnown RBP25.03■■□□□ 1.6
SPHK1-207ENST00000590959 CRB1P82279 1406 aa25.03■■□□□ 1.6
SPHK1-207ENST00000590959 CARD10Q9BWT7 1032 aa25.02■■□□□ 1.6
SPHK1-207ENST00000590959 HTATSF1O43719 755 aaKnown RBP25.02■■□□□ 1.6
SPHK1-207ENST00000590959 MCM10Q7L590 875 aa25.01■■□□□ 1.59
SPHK1-207ENST00000590959 MBIPQ9NS73 344 aa25■■□□□ 1.59
SPHK1-207ENST00000590959 GNAT3A8MTJ3 354 aa24.99■■□□□ 1.59
SPHK1-207ENST00000590959 CCDC9Q9Y3X0 531 aaKnown RBP24.98■■□□□ 1.59
SPHK1-207ENST00000590959 SPATA31A1Q5TZJ5 1347 aa24.98■■□□□ 1.59
SPHK1-207ENST00000590959 SPATA31A5Q5VU36 1347 aa24.98■■□□□ 1.59
SPHK1-207ENST00000590959 SPATA31A7Q8IWB4 1347 aa24.98■■□□□ 1.59
SPHK1-207ENST00000590959 VPS72Q15906 364 aa24.98■■□□□ 1.59
SPHK1-207ENST00000590959 EXOC6Q8TAG9 804 aa24.97■■□□□ 1.59
SPHK1-207ENST00000590959 MAP3K5Q99683 1374 aa24.97■■□□□ 1.59
SPHK1-207ENST00000590959 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.97■■□□□ 1.59
SPHK1-207ENST00000590959 MEGF6O75095 1541 aa24.96■■□□□ 1.59
SPHK1-207ENST00000590959 AMOTQ4VCS5 1084 aa24.96■■□□□ 1.59
SPHK1-207ENST00000590959 PLEKHO1Q53GL0 409 aaPredicted RBP24.95■■□□□ 1.58
SPHK1-207ENST00000590959 C20orf194Q5TEA3 1177 aa24.95■■□□□ 1.58
SPHK1-207ENST00000590959 ZNF428Q96B54 188 aa24.95■■□□□ 1.58
SPHK1-207ENST00000590959 CHL1O00533 1208 aa24.94■■□□□ 1.58
SPHK1-207ENST00000590959 CANXP27824 592 aaKnown RBP24.94■■□□□ 1.58
SPHK1-207ENST00000590959 RGS17Q9UGC6 210 aaPredicted RBP24.94■■□□□ 1.58
SPHK1-207ENST00000590959 CRBNQ96SW2 442 aa24.93■■□□□ 1.58
SPHK1-207ENST00000590959 BCL2L13Q9BXK5 485 aa24.93■■□□□ 1.58
SPHK1-207ENST00000590959 QTRT2Q9H974 415 aaKnown RBP24.93■■□□□ 1.58
SPHK1-207ENST00000590959 RAPGEF4Q8WZA2 1011 aa24.92■■□□□ 1.58
SPHK1-207ENST00000590959 NOP58Q9Y2X3 529 aaKnown RBP24.92■■□□□ 1.58
SPHK1-207ENST00000590959 ATRNO75882 1429 aa24.92■■□□□ 1.58
SPHK1-207ENST00000590959 FRAT1Q92837 279 aaPredicted RBP24.92■■□□□ 1.58
SPHK1-207ENST00000590959 TRPC5Q9UL62 973 aaPredicted RBP24.92■■□□□ 1.58
SPHK1-207ENST00000590959 IL2RBP14784 551 aa24.91■■□□□ 1.58
SPHK1-207ENST00000590959 ANP32AP39687 249 aaKnown RBP24.91■■□□□ 1.58
SPHK1-207ENST00000590959 PDE3AQ14432 1141 aa24.91■■□□□ 1.58
SPHK1-207ENST00000590959 GJD4Q96KN9 370 aaPredicted RBP24.91■■□□□ 1.58
SPHK1-207ENST00000590959 SMC4Q9NTJ3 1288 aa24.91■■□□□ 1.58
SPHK1-207ENST00000590959 ALDH1L2Q3SY69 923 aa24.9■■□□□ 1.58
SPHK1-207ENST00000590959 SSH1Q8WYL5 1049 aa24.89■■□□□ 1.58
SPHK1-207ENST00000590959 DISP2A7MBM2 1401 aa24.89■■□□□ 1.58
SPHK1-207ENST00000590959 VAMP4O75379 141 aa24.89■■□□□ 1.57
SPHK1-207ENST00000590959 TATP17735 454 aaPredicted RBP24.89■■□□□ 1.57
SPHK1-207ENST00000590959 FAM98CQ17RN3 349 aaKnown RBP24.89■■□□□ 1.57
SPHK1-207ENST00000590959 AKAP4Q5JQC9 854 aa24.89■■□□□ 1.57
SPHK1-207ENST00000590959 ZNF530Q6P9A1 599 aaPredicted RBP24.89■■□□□ 1.57
SPHK1-207ENST00000590959 GLI3P10071 1580 aa24.89■■□□□ 1.57
SPHK1-207ENST00000590959 TWISTNBQ3B726 338 aaPredicted RBP24.88■■□□□ 1.57
SPHK1-207ENST00000590959 IL17REQ8NFR9 667 aa24.88■■□□□ 1.57
SPHK1-207ENST00000590959 THRAP3Q9Y2W1 955 aaKnown RBP24.88■■□□□ 1.57
SPHK1-207ENST00000590959 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
SPHK1-207ENST00000590959 LRRC37A3O60309 1634 aa24.87■■□□□ 1.57
SPHK1-207ENST00000590959 ZNF772Q68DY9 489 aaPredicted RBP24.87■■□□□ 1.57
SPHK1-207ENST00000590959 PLEKHG2Q9H7P9 1386 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 C1orf141Q5JVX7 400 aa24.86■■□□□ 1.57
SPHK1-207ENST00000590959 BARGINQ6ZT62 677 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms