RNA–Protein interactions for RNA: ENST00000584054.5

EIF4A1-231, Transcript of eukaryotic translation initiation factor 4A1, human

TSL 2

Gene EIF4A1, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF4A1-231	ENST00000584054	AEBP1	Q8IUX7	1158 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	MRS2	Q9HD23	443 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	NLRP2	Q9NX02	1062 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	ADAMTS8	Q9UP79	889 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	MEGF6	O75095	1541 aa		13.34	□□□□□ -0.27
EIF4A1-231	ENST00000584054	CSB-PGBD3	P0DP91	1061 aa		13.33	□□□□□ -0.28
EIF4A1-231	ENST00000584054	SULT6B1	Q6IMI4	303 aa		13.33	□□□□□ -0.28
EIF4A1-231	ENST00000584054	WNK3	Q9BYP7	1800 aa		13.33	□□□□□ -0.28
EIF4A1-231	ENST00000584054	IL2RB	P14784	551 aa		13.32	□□□□□ -0.28
EIF4A1-231	ENST00000584054	PARP4	Q9UKK3	1724 aa	Known RBP	13.32	□□□□□ -0.28
EIF4A1-231	ENST00000584054	PKD1L3	Q7Z443	1732 aa		13.31	□□□□□ -0.28
EIF4A1-231	ENST00000584054	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.31	□□□□□ -0.28
EIF4A1-231	ENST00000584054	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	1e-10	■■■■□ 21.4
EIF4A1-231	ENST00000584054	USHBP1	Q8N6Y0	703 aa		13.31	□□□□□ -0.28
EIF4A1-231	ENST00000584054	BCL9	O00512	1426 aa		13.3	□□□□□ -0.28
EIF4A1-231	ENST00000584054	U2SURP	O15042	1029 aa	Known RBP	13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	HMOX1	P09601	288 aa		13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	NKX1-1	Q15270	411 aa	Predicted RBP	13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	AMOT	Q4VCS5	1084 aa		13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	PHACTR3	Q96KR7	559 aa		13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	PNN	Q9H307	717 aa	Known RBP	13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	TNS2	Q63HR2	1409 aa		13.29	□□□□□ -0.28
EIF4A1-231	ENST00000584054	SHANK3	Q9BYB0	1731 aa		13.28	□□□□□ -0.28
EIF4A1-231	ENST00000584054	TAT	P17735	454 aa	Predicted RBP	13.28	□□□□□ -0.28
EIF4A1-231	ENST00000584054	RXRB	P28702	533 aa		13.28	□□□□□ -0.28
EIF4A1-231	ENST00000584054	PRKAR2B	P31323	418 aa		13.28	□□□□□ -0.28
EIF4A1-231	ENST00000584054	RAPGEF4	Q8WZA2	1011 aa		13.28	□□□□□ -0.28
EIF4A1-231	ENST00000584054	WDR43	Q15061	677 aa	Known RBP eCLIP	13.27	□□□□□ -0.29
EIF4A1-231	ENST00000584054	FAM98C	Q17RN3	349 aa	Known RBP	13.27	□□□□□ -0.29
EIF4A1-231	ENST00000584054	RUNDC1	Q96C34	613 aa		13.27	□□□□□ -0.29
EIF4A1-231	ENST00000584054	LRRC37A3	O60309	1634 aa		13.27	□□□□□ -0.29
EIF4A1-231	ENST00000584054	ADAMTS7	Q9UKP4	1686 aa		13.27	□□□□□ -0.29
EIF4A1-231	ENST00000584054	CYP27B1	O15528	508 aa		13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	MTHFSD	Q2M296	383 aa	Known RBP	13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	SEPT12	Q8IYM1	358 aa		13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	ZCRB1	Q8TBF4	217 aa	Known RBP	13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	USP35	Q9P2H5	1018 aa		13.26	□□□□□ -0.29
EIF4A1-231	ENST00000584054	RGS12	O14924	1447 aa		13.25	□□□□□ -0.29
EIF4A1-231	ENST00000584054	EXOC5	O00471	708 aa		13.25	□□□□□ -0.29
EIF4A1-231	ENST00000584054	ILDR2	Q71H61	639 aa		13.25	□□□□□ -0.29
EIF4A1-231	ENST00000584054	HTATSF1	O43719	755 aa	Known RBP	13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	PHKG2	P15735	406 aa		13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	DDB1	Q16531	1140 aa		13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	MARCH10	Q8NA82	808 aa	Predicted RBP	13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	SPG7	Q9UQ90	795 aa		13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	CCDC9	Q9Y3X0	531 aa	Known RBP	13.24	□□□□□ -0.29
EIF4A1-231	ENST00000584054	TMPO	P42166	694 aa	Known RBP	13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	NFE2L2	Q16236	605 aa		13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	CCDC27	Q2M243	656 aa		13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	AKAP4	Q5JQC9	854 aa		13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	NGEF	Q8N5V2	710 aa		13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	GAS2L2	Q8NHY3	880 aa		13.23	□□□□□ -0.29
EIF4A1-231	ENST00000584054	CEMIP	Q8WUJ3	1361 aa		13.22	□□□□□ -0.29
EIF4A1-231	ENST00000584054	PCDH11X	Q9BZA7	1347 aa		13.22	□□□□□ -0.29
EIF4A1-231	ENST00000584054	PCDH11Y	Q9BZA8	1340 aa		13.22	□□□□□ -0.29
EIF4A1-231	ENST00000584054	SOCS7	O14512	581 aa		13.22	□□□□□ -0.29
EIF4A1-231	ENST00000584054	IFNL2	Q8IZJ0	200 aa		13.22	□□□□□ -0.29
EIF4A1-231	ENST00000584054	TRIM35	Q9UPQ4	493 aa		13.21	□□□□□ -0.29
EIF4A1-231	ENST00000584054	ZNF521	Q96K83	1311 aa		13.2	□□□□□ -0.3
EIF4A1-231	ENST00000584054	APAF1	O14727	1248 aa		13.2	□□□□□ -0.3
EIF4A1-231	ENST00000584054	FAM9B	Q8IZU0	186 aa		13.2	□□□□□ -0.3
EIF4A1-231	ENST00000584054	KDM6A	O15550	1401 aa	Predicted RBP	13.2	□□□□□ -0.3
EIF4A1-231	ENST00000584054	BRWD3	Q6RI45	1802 aa		13.2	□□□□□ -0.3
EIF4A1-231	ENST00000584054	MRC1	P22897	1456 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	HSP90AB1	P08238	724 aa	Known RBP	13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	KRT27	Q7Z3Y8	459 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	CCDC146	Q8IYE0	955 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	IL17RE	Q8NFR9	667 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	DCAF5	Q96JK2	942 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	MAP3K5	Q99683	1374 aa		13.19	□□□□□ -0.3
EIF4A1-231	ENST00000584054	GNAT3	A8MTJ3	354 aa		13.18	□□□□□ -0.3
EIF4A1-231	ENST00000584054	MAPK8IP3	Q9UPT6	1336 aa		13.17	□□□□□ -0.3
EIF4A1-231	ENST00000584054	ERVV-2	B6SEH9	535 aa		13.17	□□□□□ -0.3
EIF4A1-231	ENST00000584054	RNMT	O43148	476 aa	Known RBP	13.17	□□□□□ -0.3
EIF4A1-231	ENST00000584054	PDE3B	Q13370	1112 aa		13.17	□□□□□ -0.3
EIF4A1-231	ENST00000584054	DLG5	Q8TDM6	1919 aa		13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	RIPK4	P57078	832 aa		13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	DDX54	Q8TDD1	881 aa	Known RBP	13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	LGR6	Q9HBX8	967 aa		13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	SCN11A	Q9UI33	1791 aa		13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	TOGARAM1	Q9Y4F4	1720 aa		13.16	□□□□□ -0.3
EIF4A1-231	ENST00000584054	NEFM	P07197	916 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	ZNF853	P0CG23	659 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	C1orf141	Q5JVX7	400 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	FAM196A	Q6ZSG2	479 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	WWC1	Q8IX03	1113 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	BABAM1	Q9NWV8	329 aa		13.15	□□□□□ -0.3
EIF4A1-231	ENST00000584054	PLCB2	Q00722	1185 aa		13.14	□□□□□ -0.31
EIF4A1-231	ENST00000584054	LMOD3	Q0VAK6	560 aa		13.14	□□□□□ -0.31
EIF4A1-231	ENST00000584054	SIPA1L3	O60292	1781 aa	Predicted RBP	13.14	□□□□□ -0.31
EIF4A1-231	ENST00000584054	IL16	Q14005	1332 aa		13.13	□□□□□ -0.31
EIF4A1-231	ENST00000584054	MPRIP	Q6WCQ1	1025 aa		13.13	□□□□□ -0.31
EIF4A1-231	ENST00000584054	WDR63	Q8IWG1	891 aa		13.13	□□□□□ -0.31
EIF4A1-231	ENST00000584054	SLC52A2	Q9HAB3	445 aa		13.13	□□□□□ -0.31
EIF4A1-231	ENST00000584054	SBF2	Q86WG5	1849 aa		13.13	□□□□□ -0.31
EIF4A1-231	ENST00000584054	NHS	Q6T4R5	1651 aa		13.12	□□□□□ -0.31
EIF4A1-231	ENST00000584054	RRP7A	Q9Y3A4	280 aa	Known RBP	13.12	□□□□□ -0.31
EIF4A1-231	ENST00000584054	EP400	Q96L91	3159 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms