RNA–Protein interactions for RNA: ENST00000580986.1

CCDC47-203, Transcript of coiled-coil domain containing 47, humanhuman

TSL 4

Gene CCDC47, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-203ENST00000580986 EVA1CP58658 441 aa13.93□□□□□ -0.18
CCDC47-203ENST00000580986 RGPD2P0DJD1 1756 aa13.93□□□□□ -0.18
CCDC47-203ENST00000580986 SPATA31A5Q5VU36 1347 aa13.92□□□□□ -0.18
CCDC47-203ENST00000580986 SPATA31A7Q8IWB4 1347 aa13.92□□□□□ -0.18
CCDC47-203ENST00000580986 TRPC5Q9UL62 973 aaPredicted RBP13.92□□□□□ -0.18
CCDC47-203ENST00000580986 SPATA31A1Q5TZJ5 1347 aa13.91□□□□□ -0.18
CCDC47-203ENST00000580986 PARP4Q9UKK3 1724 aaKnown RBP13.91□□□□□ -0.18
CCDC47-203ENST00000580986 LARP1Q6PKG0 1096 aaKnown RBP13.91□□□□□ -0.18
CCDC47-203ENST00000580986 EYA1Q99502 592 aa13.91□□□□□ -0.18
CCDC47-203ENST00000580986 GLI3P10071 1580 aa13.91□□□□□ -0.18
CCDC47-203ENST00000580986 DISP2A7MBM2 1401 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 CSB-PGBD3P0DP91 1061 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 NBPF6Q5VWK0 638 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 BARGINQ6ZT62 677 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 TOM1L2Q6ZVM7 507 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 MIER1Q8N108 512 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 NBPF4Q96M43 638 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 CDCA7Q9BWT1 371 aaPredicted RBP13.9□□□□□ -0.18
CCDC47-203ENST00000580986 MRS2Q9HD23 443 aa13.9□□□□□ -0.18
CCDC47-203ENST00000580986 THSD7AQ9UPZ6 1657 aa13.89□□□□□ -0.19
CCDC47-203ENST00000580986 STRN4Q9NRL3 753 aa13.89□□□□□ -0.19
CCDC47-203ENST00000580986 PKD1L3Q7Z443 1732 aa13.88□□□□□ -0.19
CCDC47-203ENST00000580986 FCHSD2O94868 740 aa13.88□□□□□ -0.19
CCDC47-203ENST00000580986 TCP11L2Q8N4U5 519 aa13.88□□□□□ -0.19
CCDC47-203ENST00000580986 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
CCDC47-203ENST00000580986 LTV1Q96GA3 475 aaPredicted RBP13.88□□□□□ -0.19
CCDC47-203ENST00000580986 GJD4Q96KN9 370 aaPredicted RBP13.88□□□□□ -0.19
CCDC47-203ENST00000580986 NLRP2Q9NX02 1062 aa13.88□□□□□ -0.19
CCDC47-203ENST00000580986 C19orf67A6NJJ6 358 aa13.87□□□□□ -0.19
CCDC47-203ENST00000580986 ONECUT3O60422 494 aaPredicted RBP13.87□□□□□ -0.19
CCDC47-203ENST00000580986 WDR43Q15061 677 aaKnown RBP eCLIP13.87□□□□□ -0.19
CCDC47-203ENST00000580986 CCDC184Q52MB2 194 aa13.87□□□□□ -0.19
CCDC47-203ENST00000580986 PNNQ9H307 717 aaKnown RBP13.87□□□□□ -0.19
CCDC47-203ENST00000580986 OVOS2A0A0G2JMS6 1433 aa13.87□□□□□ -0.19
CCDC47-203ENST00000580986 PRR29P0C7W0 189 aa13.86□□□□□ -0.19
CCDC47-203ENST00000580986 QTRT2Q9H974 415 aaKnown RBP13.86□□□□□ -0.19
CCDC47-203ENST00000580986 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.86□□□□□ -0.191e-15■□□□□ 10.8
CCDC47-203ENST00000580986 RGS17Q9UGC6 210 aaPredicted RBP13.86□□□□□ -0.19
CCDC47-203ENST00000580986 MEGF6O75095 1541 aa13.85□□□□□ -0.19
CCDC47-203ENST00000580986 U2SURPO15042 1029 aaKnown RBP13.85□□□□□ -0.19
CCDC47-203ENST00000580986 U2AF1L5P0DN76 240 aaPredicted RBP13.85□□□□□ -0.19
CCDC47-203ENST00000580986 RBM6P78332 1123 aaKnown RBP13.85□□□□□ -0.19
CCDC47-203ENST00000580986 U2AF1Q01081 240 aaKnown RBP eCLIP13.85□□□□□ -0.19
CCDC47-203ENST00000580986 CHADLQ6NUI6 762 aa13.85□□□□□ -0.19
CCDC47-203ENST00000580986 RSPH6AQ9H0K4 717 aa13.85□□□□□ -0.19
CCDC47-203ENST00000580986 LRRC37A3O60309 1634 aa13.85□□□□□ -0.19
CCDC47-203ENST00000580986 TNS2Q63HR2 1409 aa13.84□□□□□ -0.19
CCDC47-203ENST00000580986 IL2RBP14784 551 aa13.84□□□□□ -0.19
CCDC47-203ENST00000580986 SULT6B1Q6IMI4 303 aa13.84□□□□□ -0.19
CCDC47-203ENST00000580986 RAPGEF4Q8WZA2 1011 aa13.84□□□□□ -0.19
CCDC47-203ENST00000580986 SHANK3Q9BYB0 1731 aa13.83□□□□□ -0.2
CCDC47-203ENST00000580986 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
CCDC47-203ENST00000580986 AMOTQ4VCS5 1084 aa13.82□□□□□ -0.2
CCDC47-203ENST00000580986 AEBP1Q8IUX7 1158 aa13.82□□□□□ -0.2
CCDC47-203ENST00000580986 PLEKHF1Q96S99 279 aa13.82□□□□□ -0.2
CCDC47-203ENST00000580986 ADAMTS8Q9UP79 889 aa13.82□□□□□ -0.2
CCDC47-203ENST00000580986 CCDC9Q9Y3X0 531 aaKnown RBP13.82□□□□□ -0.2
CCDC47-203ENST00000580986 USHBP1Q8N6Y0 703 aa13.81□□□□□ -0.2
CCDC47-203ENST00000580986 HMOX1P09601 288 aa13.8□□□□□ -0.2
CCDC47-203ENST00000580986 RXRBP28702 533 aa13.8□□□□□ -0.2
CCDC47-203ENST00000580986 PRKAR2BP31323 418 aa13.8□□□□□ -0.2
CCDC47-203ENST00000580986 USP35Q9P2H5 1018 aa13.8□□□□□ -0.2
CCDC47-203ENST00000580986 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 NEFMP07197 916 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 FAM98CQ17RN3 349 aaKnown RBP13.79□□□□□ -0.2
CCDC47-203ENST00000580986 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 RUNDC1Q96C34 613 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 SPG7Q9UQ90 795 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 BCL9O00512 1426 aa13.79□□□□□ -0.2
CCDC47-203ENST00000580986 PLEKHO1Q53GL0 409 aaPredicted RBP13.78□□□□□ -0.2
CCDC47-203ENST00000580986 NGEFQ8N5V2 710 aa13.78□□□□□ -0.2
CCDC47-203ENST00000580986 GAS2L2Q8NHY3 880 aa13.78□□□□□ -0.2
CCDC47-203ENST00000580986 ZCRB1Q8TBF4 217 aaKnown RBP13.78□□□□□ -0.2
CCDC47-203ENST00000580986 PCDH11XQ9BZA7 1347 aa13.78□□□□□ -0.2
CCDC47-203ENST00000580986 PCDH11YQ9BZA8 1340 aa13.78□□□□□ -0.2
CCDC47-203ENST00000580986 EXOC5O00471 708 aa13.77□□□□□ -0.21
CCDC47-203ENST00000580986 RGS12O14924 1447 aa13.77□□□□□ -0.21
CCDC47-203ENST00000580986 DDB1Q16531 1140 aa13.77□□□□□ -0.21
CCDC47-203ENST00000580986 MAPK8IP3Q9UPT6 1336 aa13.77□□□□□ -0.21
CCDC47-203ENST00000580986 BRWD3Q6RI45 1802 aa13.76□□□□□ -0.21
CCDC47-203ENST00000580986 HTATSF1O43719 755 aaKnown RBP13.75□□□□□ -0.21
CCDC47-203ENST00000580986 NKX1-1Q15270 411 aaPredicted RBP13.75□□□□□ -0.21
CCDC47-203ENST00000580986 SEPT12Q8IYM1 358 aa13.75□□□□□ -0.21
CCDC47-203ENST00000580986 FAM9BQ8IZU0 186 aa13.75□□□□□ -0.21
CCDC47-203ENST00000580986 DLG5Q8TDM6 1919 aa13.74□□□□□ -0.21
CCDC47-203ENST00000580986 HSP90AB1P08238 724 aaKnown RBP13.74□□□□□ -0.21
CCDC47-203ENST00000580986 NFE2L2Q16236 605 aa13.74□□□□□ -0.21
CCDC47-203ENST00000580986 MTHFSDQ2M296 383 aaKnown RBP13.74□□□□□ -0.21
CCDC47-203ENST00000580986 AKAP4Q5JQC9 854 aa13.74□□□□□ -0.21
CCDC47-203ENST00000580986 IFNL2Q8IZJ0 200 aa13.74□□□□□ -0.21
CCDC47-203ENST00000580986 PHACTR3Q96KR7 559 aa13.74□□□□□ -0.21
CCDC47-203ENST00000580986 SCN11AQ9UI33 1791 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 MAP3K5Q99683 1374 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 CYP27B1O15528 508 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 GABBR2O75899 941 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 PHKG2P15735 406 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 MRC1P22897 1456 aa13.73□□□□□ -0.21
CCDC47-203ENST00000580986 VIRMAQ69YN4 1812 aaKnown RBP13.72□□□□□ -0.21
CCDC47-203ENST00000580986 TMPOP42166 694 aaKnown RBP13.72□□□□□ -0.21
CCDC47-203ENST00000580986 LMOD3Q0VAK6 560 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms