RNA–Protein interactions for RNA: ENST00000577802.1

CDK5RAP3-205, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 415 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-205ENST00000577802 NEUROD2Q15784 382 aa17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 WDR63Q8IWG1 891 aa17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 SALL2Q9Y467 1007 aaPredicted RBP17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 LRRC37A3O60309 1634 aa17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 MAP3K5Q99683 1374 aa17.38■□□□□ 0.37
CDK5RAP3-205ENST00000577802 MEGF6O75095 1541 aa17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 HTATSF1O43719 755 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 WWC1Q8IX03 1113 aa17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 RTF1Q92541 710 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 PHACTR3Q96KR7 559 aa17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 SPG7Q9UQ90 795 aa17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 THRAP3Q9Y2W1 955 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
CDK5RAP3-205ENST00000577802 E9PSI1 815 aa17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 C1orf141Q5JVX7 400 aa17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 LARP1Q6PKG0 1096 aaKnown RBP17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 NGLY1Q96IV0 654 aa17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 C8orf37Q96NL8 207 aa17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 CDCA7Q9BWT1 371 aaPredicted RBP17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 IL16Q14005 1332 aa17.36■□□□□ 0.37
CDK5RAP3-205ENST00000577802 IL2RBP14784 551 aa17.35■□□□□ 0.37
CDK5RAP3-205ENST00000577802 GNAT3A8MTJ3 354 aa17.34■□□□□ 0.37
CDK5RAP3-205ENST00000577802 MTHFSDQ2M296 383 aaKnown RBP17.34■□□□□ 0.37
CDK5RAP3-205ENST00000577802 UNC5CLQ8IV45 518 aa17.34■□□□□ 0.37
CDK5RAP3-205ENST00000577802 MYH16Q9H6N6 1097 aa17.34■□□□□ 0.37
CDK5RAP3-205ENST00000577802 PCDH11XQ9BZA7 1347 aa17.33■□□□□ 0.36
CDK5RAP3-205ENST00000577802 PCDH11YQ9BZA8 1340 aa17.33■□□□□ 0.36
CDK5RAP3-205ENST00000577802 AKAP4Q5JQC9 854 aa17.33■□□□□ 0.36
CDK5RAP3-205ENST00000577802 ZNF530Q6P9A1 599 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-205ENST00000577802 FNBP4Q8N3X1 1017 aaPredicted RBP17.33■□□□□ 0.36
CDK5RAP3-205ENST00000577802 DISP2A7MBM2 1401 aa17.32■□□□□ 0.36
CDK5RAP3-205ENST00000577802 TRIM35Q9UPQ4 493 aa17.32■□□□□ 0.36
CDK5RAP3-205ENST00000577802 ADAMTS7Q9UKP4 1686 aa17.32■□□□□ 0.36
CDK5RAP3-205ENST00000577802 BCL9LQ86UU0 1499 aa17.31■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SPATA31A1Q5TZJ5 1347 aa17.31■□□□□ 0.36
CDK5RAP3-205ENST00000577802 HSP90AB1P08238 724 aaKnown RBP17.31■□□□□ 0.36
CDK5RAP3-205ENST00000577802 TNS2Q63HR2 1409 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SPATA31A5Q5VU36 1347 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SPATA31A7Q8IWB4 1347 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 VPS72Q15906 364 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 USP21Q9UK80 565 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 CCDC9Q9Y3X0 531 aaKnown RBP17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SHANK3Q9BYB0 1731 aa17.3■□□□□ 0.36
CDK5RAP3-205ENST00000577802 VIRMAQ69YN4 1812 aaKnown RBP17.29■□□□□ 0.36
CDK5RAP3-205ENST00000577802 GNAI1P63096 354 aa17.29■□□□□ 0.36
CDK5RAP3-205ENST00000577802 IFT57Q9NWB7 429 aa17.29■□□□□ 0.36
CDK5RAP3-205ENST00000577802 AFF2P51816 1311 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 BARGINQ6ZT62 677 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 IFNL2Q8IZJ0 200 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
CDK5RAP3-205ENST00000577802 ZCRB1Q8TBF4 217 aaKnown RBP17.27■□□□□ 0.36
CDK5RAP3-205ENST00000577802 CEMIPQ8WUJ3 1361 aa17.27■□□□□ 0.35
CDK5RAP3-205ENST00000577802 MRC1P22897 1456 aa17.26■□□□□ 0.35
CDK5RAP3-205ENST00000577802 BABAM1Q9NWV8 329 aa17.26■□□□□ 0.35
CDK5RAP3-205ENST00000577802 ATRNO75882 1429 aa17.26■□□□□ 0.35
CDK5RAP3-205ENST00000577802 PHKG2P15735 406 aa17.25■□□□□ 0.35
CDK5RAP3-205ENST00000577802 CFAP44Q96MT7 982 aa17.25■□□□□ 0.35
CDK5RAP3-205ENST00000577802 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
CDK5RAP3-205ENST00000577802 THSD7AQ9UPZ6 1657 aa17.25■□□□□ 0.35
CDK5RAP3-205ENST00000577802 CT47B1P0C2W7 299 aaPredicted RBP17.24■□□□□ 0.35
CDK5RAP3-205ENST00000577802 TEFQ10587 303 aa17.24■□□□□ 0.35
CDK5RAP3-205ENST00000577802 DUSP27Q5VZP5 1158 aa17.24■□□□□ 0.35
CDK5RAP3-205ENST00000577802 DCAF5Q96JK2 942 aa17.24■□□□□ 0.35
CDK5RAP3-205ENST00000577802 FANCIQ9NVI1 1328 aa17.23■□□□□ 0.35
CDK5RAP3-205ENST00000577802 SIPA1L3O60292 1781 aaPredicted RBP17.23■□□□□ 0.35
CDK5RAP3-205ENST00000577802 MCM10Q7L590 875 aa17.23■□□□□ 0.35
CDK5RAP3-205ENST00000577802 TRMT2AQ8IZ69 625 aaKnown RBP17.23■□□□□ 0.35
CDK5RAP3-205ENST00000577802 CDCA7LQ96GN5 454 aa17.23■□□□□ 0.35
CDK5RAP3-205ENST00000577802 ZNF772Q68DY9 489 aaPredicted RBP17.22■□□□□ 0.35
CDK5RAP3-205ENST00000577802 KDM3BQ7LBC6 1761 aa17.21■□□□□ 0.35
CDK5RAP3-205ENST00000577802 GLI3P10071 1580 aa17.21■□□□□ 0.35
CDK5RAP3-205ENST00000577802 EXOC5O00471 708 aa17.21■□□□□ 0.35
CDK5RAP3-205ENST00000577802 DDB1Q16531 1140 aa17.21■□□□□ 0.35
CDK5RAP3-205ENST00000577802 KDM6AO15550 1401 aaPredicted RBP17.21■□□□□ 0.34
CDK5RAP3-205ENST00000577802 RNMTO43148 476 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-205ENST00000577802 DCTN1Q14203 1278 aa17.2■□□□□ 0.34
CDK5RAP3-205ENST00000577802 THUMPD2Q9BTF0 503 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-205ENST00000577802 LAS1LQ9Y4W2 734 aaKnown RBP17.2■□□□□ 0.34
CDK5RAP3-205ENST00000577802 CYP27B1O15528 508 aa17.19■□□□□ 0.34
CDK5RAP3-205ENST00000577802 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
CDK5RAP3-205ENST00000577802 NKX1-1Q15270 411 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-205ENST00000577802 SOS1Q07889 1333 aaPredicted RBP17.19■□□□□ 0.34
CDK5RAP3-205ENST00000577802 TAF7Q15545 349 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-205ENST00000577802 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
CDK5RAP3-205ENST00000577802 ZNF428Q96B54 188 aa17.18■□□□□ 0.34
CDK5RAP3-205ENST00000577802 GJD4Q96KN9 370 aaPredicted RBP17.18■□□□□ 0.34
CDK5RAP3-205ENST00000577802 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
CDK5RAP3-205ENST00000577802 A0A0G2JS52 829 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 CHL1O00533 1208 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 MYT1Q01538 1121 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 IL17REQ8NFR9 667 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 DOT1LQ8TEK3 1739 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 CHMP4AQ9BY43 222 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 SPINK5Q9NQ38 1064 aaPredicted RBP17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 MBIPQ9NS73 344 aa17.17■□□□□ 0.34
CDK5RAP3-205ENST00000577802 TOGARAM1Q9Y4F4 1720 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms