RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 CT47A1Q5JQC4 288 aaPredicted RBP7.93□□□□□ -1.14
KARS-211ENST00000569298 GIGYF2Q6Y7W6 1299 aaKnown RBP7.93□□□□□ -1.14
KARS-211ENST00000569298 TSHZ1Q6ZSZ6 1077 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 ANKRD23Q86SG2 305 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 AEBP1Q8IUX7 1158 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 RNF217Q8TC41 542 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 UPF2Q9HAU5 1272 aaKnown RBP7.93□□□□□ -1.14
KARS-211ENST00000569298 ZKSCAN5Q9Y2L8 839 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 ZMYM3Q14202 1370 aa7.93□□□□□ -1.14
KARS-211ENST00000569298 GSCP56915 257 aaPredicted RBP7.92□□□□□ -1.14
KARS-211ENST00000569298 HDAC1Q13547 482 aaPredicted RBP7.92□□□□□ -1.14
KARS-211ENST00000569298 C11orf91Q3C1V1 193 aa7.92□□□□□ -1.14
KARS-211ENST00000569298 PDLIM2Q96JY6 352 aa7.92□□□□□ -1.14
KARS-211ENST00000569298 MRVI1Q9Y6F6 885 aa7.92□□□□□ -1.14
KARS-211ENST00000569298 KIAA1107Q9UPP5 1409 aa7.92□□□□□ -1.14
KARS-211ENST00000569298 CCDC196A0A1B0GTZ2 297 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 GOLGA6L6A8MZA4 724 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 GOLGA6L22H0YM25 854 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 DHX16O60231 1041 aaKnown RBP7.91□□□□□ -1.14
KARS-211ENST00000569298 SLC10A3P09131 477 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 HSPA5P11021 654 aaKnown RBP7.91□□□□□ -1.14
KARS-211ENST00000569298 ARID4AP29374 1257 aaPredicted RBP7.91□□□□□ -1.14
KARS-211ENST00000569298 TERF2Q15554 542 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 ATP2B3Q16720 1220 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 CCDC96Q2M329 555 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 CCDC91Q7Z6B0 441 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 ANKRD7Q92527 254 aa7.91□□□□□ -1.14
KARS-211ENST00000569298 MORC2Q9Y6X9 1032 aaPredicted RBP7.91□□□□□ -1.14
KARS-211ENST00000569298 CFAP65Q6ZU64 1925 aaKnown RBP7.9□□□□□ -1.14
KARS-211ENST00000569298 CTAGE5O15320 804 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 TDO2P48775 406 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 COPS2P61201 443 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 KMT5BQ4FZB7 885 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 MUM1L1Q5H9M0 696 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 JMYQ8N9B5 988 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 RASSF4Q9H2L5 321 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 CHMP5Q9NZZ3 219 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 PAXBP1Q9Y5B6 917 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 PCDHB3Q9Y5E6 796 aa7.9□□□□□ -1.14
KARS-211ENST00000569298 KTN1Q86UP2 1357 aaKnown RBP7.89□□□□□ -1.15
KARS-211ENST00000569298 ANKRD33BA6NCL7 494 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 ACTN4O43707 911 aaKnown RBP7.89□□□□□ -1.15
KARS-211ENST00000569298 ZPR1O75312 459 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 CFHP08603 1231 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 MDM2Q00987 491 aaPredicted RBP7.89□□□□□ -1.15
KARS-211ENST00000569298 PDE3BQ13370 1112 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 TSPAN18Q96SJ8 248 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 GPCPD1Q9NPB8 672 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 CCDC39Q9UFE4 941 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 NESP48681 1621 aa7.89□□□□□ -1.15
KARS-211ENST00000569298 MROH2BQ7Z745 1585 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 CCDC189A1A4V9 331 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 REC8O95072 547 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 RRP1P56182 461 aaKnown RBP7.88□□□□□ -1.15
KARS-211ENST00000569298 C8orf34Q49A92 452 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 PPP1R18Q6NYC8 613 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 BLOC1S3Q6QNY0 202 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 CENPQQ7L2Z9 268 aaPredicted RBP7.88□□□□□ -1.15
KARS-211ENST00000569298 TBC1D22AQ8WUA7 517 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 SGSM3Q96HU1 749 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 DIAPH3Q9NSV4 1193 aa7.88□□□□□ -1.15
KARS-211ENST00000569298 ARHGAP31Q2M1Z3 1444 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 RRBP1Q9P2E9 1410 aaKnown RBP7.87□□□□□ -1.15
KARS-211ENST00000569298 NPC1L1Q9UHC9 1359 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 COQ9O75208 318 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 CASQ1P31415 396 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 NASPP49321 788 aaPredicted RBP7.87□□□□□ -1.15
KARS-211ENST00000569298 CCDC27Q2M243 656 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 TMTC2Q8N394 836 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 PCMTD1Q96MG8 357 aaPredicted RBP7.87□□□□□ -1.15
KARS-211ENST00000569298 SIN3AQ96ST3 1273 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 PHOX2BQ99453 314 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 REPIN1Q9BWE0 567 aaKnown RBP7.87□□□□□ -1.15
KARS-211ENST00000569298 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
KARS-211ENST00000569298 CTIFO43310 598 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 IPO7O95373 1038 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 LRCH2Q5VUJ6 765 aa7.86□□□□□ -1.15
KARS-211ENST00000569298 RINLQ6ZS11 566 aa7.86□□□□□ -1.15
KARS-211ENST00000569298 SUGP1Q8IWZ8 645 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 TEX13AQ9BXU3 409 aaPredicted RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 SLKQ9H2G2 1235 aaPredicted RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 CWC22Q9HCG8 908 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 DDX41Q9UJV9 622 aaKnown RBP7.86□□□□□ -1.15
KARS-211ENST00000569298 NUB1Q9Y5A7 615 aa7.86□□□□□ -1.15
KARS-211ENST00000569298 NCOA2Q15596 1464 aa7.86□□□□□ -1.15
KARS-211ENST00000569298 FHAD1B1AJZ9 1412 aa7.86□□□□□ -1.15
KARS-211ENST00000569298 ZNF445P59923 1031 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 CHAF1AQ13111 956 aaPredicted RBP7.85□□□□□ -1.15
KARS-211ENST00000569298 RABEP1Q15276 862 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 CLEC17AQ6ZS10 378 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 EXOC8Q8IYI6 725 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 CEP89Q96ST8 783 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 CXorf56Q9H5V9 222 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 FAM53CQ9NYF3 392 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 RSPH14Q9UHP6 348 aa7.85□□□□□ -1.15
KARS-211ENST00000569298 ANAPC4Q9UJX5 808 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms