RNA–Protein interactions for RNA: ENST00000567058.1

AC009055.2-201, humanhuman

TSL 5 BASIC

Gene AC009055.2, Length 1,337 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009055.2-201ENST00000567058 EIF4A2Q14240 407 aaKnown RBP13.12□□□□□ -0.31
AC009055.2-201ENST00000567058 NBPF6Q5VWK0 638 aa13.12□□□□□ -0.31
AC009055.2-201ENST00000567058 NBPF4Q96M43 638 aa13.12□□□□□ -0.31
AC009055.2-201ENST00000567058 RGPD1P0DJD0 1748 aa13.12□□□□□ -0.31
AC009055.2-201ENST00000567058 COL3A1P02461 1466 aaPredicted RBP13.11□□□□□ -0.31
AC009055.2-201ENST00000567058 PPP2R1AP30153 589 aa13.11□□□□□ -0.31
AC009055.2-201ENST00000567058 USHBP1Q8N6Y0 703 aa13.11□□□□□ -0.31
AC009055.2-201ENST00000567058 NCAPD2Q15021 1401 aa13.1□□□□□ -0.31
AC009055.2-201ENST00000567058 SHANK3Q9BYB0 1731 aa13.09□□□□□ -0.31
AC009055.2-201ENST00000567058 MEGF6O75095 1541 aa13.09□□□□□ -0.31
AC009055.2-201ENST00000567058 EYA1Q99502 592 aa13.09□□□□□ -0.31
AC009055.2-201ENST00000567058 KAT6BQ8WYB5 2073 aa13.08□□□□□ -0.31
AC009055.2-201ENST00000567058 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
AC009055.2-201ENST00000567058 IL2RBP14784 551 aa13.08□□□□□ -0.32
AC009055.2-201ENST00000567058 AKT1S1Q96B36 256 aa13.08□□□□□ -0.32
AC009055.2-201ENST00000567058 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 IL13P35225 146 aa13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 RALBP1Q15311 655 aa13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 KRT27Q7Z3Y8 459 aa13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 CDCA7Q9BWT1 371 aaPredicted RBP13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 IGSF1Q8N6C5 1336 aa13.07□□□□□ -0.32
AC009055.2-201ENST00000567058 SBF2Q86WG5 1849 aa13.06□□□□□ -0.32
AC009055.2-201ENST00000567058 DDB1Q16531 1140 aa13.06□□□□□ -0.32
AC009055.2-201ENST00000567058 FAM182BQ5T319 152 aa13.06□□□□□ -0.32
AC009055.2-201ENST00000567058 OVOS2A0A0G2JMS6 1433 aa13.05□□□□□ -0.32
AC009055.2-201ENST00000567058 DIAPH1O60610 1272 aaKnown RBP13.05□□□□□ -0.32
AC009055.2-201ENST00000567058 PRKRIP1Q9H875 184 aaPredicted RBP13.05□□□□□ -0.32
AC009055.2-201ENST00000567058 PDE3BQ13370 1112 aa13.04□□□□□ -0.32
AC009055.2-201ENST00000567058 RAPGEF4Q8WZA2 1011 aa13.04□□□□□ -0.32
AC009055.2-201ENST00000567058 CFAP53Q96M91 514 aa13.04□□□□□ -0.32
AC009055.2-201ENST00000567058 MYBBP1AQ9BQG0 1328 aaKnown RBP13.04□□□□□ -0.32
AC009055.2-201ENST00000567058 EXOC5O00471 708 aa13.03□□□□□ -0.32
AC009055.2-201ENST00000567058 TATP17735 454 aaPredicted RBP13.03□□□□□ -0.32
AC009055.2-201ENST00000567058 AEBP1Q8IUX7 1158 aa13.03□□□□□ -0.32
AC009055.2-201ENST00000567058 MARCH10Q8NA82 808 aaPredicted RBP13.02□□□□□ -0.33
AC009055.2-201ENST00000567058 KDRP35968 1356 aa13.02□□□□□ -0.33
AC009055.2-201ENST00000567058 TNS1Q9HBL0 1735 aaKnown RBP13.02□□□□□ -0.33
AC009055.2-201ENST00000567058 SOCS7O14512 581 aa13.01□□□□□ -0.33
AC009055.2-201ENST00000567058 SULT6B1Q6IMI4 303 aa13.01□□□□□ -0.33
AC009055.2-201ENST00000567058 VIRMAQ69YN4 1812 aaKnown RBP13□□□□□ -0.33
AC009055.2-201ENST00000567058 DOT1LQ8TEK3 1739 aa13□□□□□ -0.33
AC009055.2-201ENST00000567058 U2SURPO15042 1029 aaKnown RBP13□□□□□ -0.33
AC009055.2-201ENST00000567058 HMOX1P09601 288 aa13□□□□□ -0.33
AC009055.2-201ENST00000567058 ZCRB1Q8TBF4 217 aaKnown RBP13□□□□□ -0.33
AC009055.2-201ENST00000567058 NHSQ6T4R5 1651 aa12.99□□□□□ -0.33
AC009055.2-201ENST00000567058 ANP32CO43423 234 aa12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 FAM196AQ6ZSG2 479 aa12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 DDX54Q8TDD1 881 aaKnown RBP12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 UPF1Q92900 1129 aaKnown RBP eCLIP12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 NUDCQ9Y266 331 aa12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 TOGARAM1Q9Y4F4 1720 aa12.98□□□□□ -0.33
AC009055.2-201ENST00000567058 ITGB4P16144 1822 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 PLEKHG2Q9H7P9 1386 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 PCDH11XQ9BZA7 1347 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 PCDH11YQ9BZA8 1340 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 ZBTB22O15209 634 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 BCL9O00512 1426 aa12.97□□□□□ -0.33
AC009055.2-201ENST00000567058 CYP27B1O15528 508 aa12.96□□□□□ -0.33
AC009055.2-201ENST00000567058 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.96□□□□□ -0.33
AC009055.2-201ENST00000567058 SPG7Q9UQ90 795 aa12.96□□□□□ -0.33
AC009055.2-201ENST00000567058 BTAF1O14981 1849 aa12.96□□□□□ -0.33
AC009055.2-201ENST00000567058 TRIM37O94972 964 aa12.95□□□□□ -0.34
AC009055.2-201ENST00000567058 U2AF1L5P0DN76 240 aaPredicted RBP12.95□□□□□ -0.34
AC009055.2-201ENST00000567058 U2AF1Q01081 240 aaKnown RBP eCLIP12.95□□□□□ -0.34
AC009055.2-201ENST00000567058 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
AC009055.2-201ENST00000567058 SCN11AQ9UI33 1791 aa12.95□□□□□ -0.34
AC009055.2-201ENST00000567058 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
AC009055.2-201ENST00000567058 REM2Q8IYK8 340 aaPredicted RBP12.94□□□□□ -0.34
AC009055.2-201ENST00000567058 DLG5Q8TDM6 1919 aa12.94□□□□□ -0.34
AC009055.2-201ENST00000567058 AMOTQ4VCS5 1084 aa12.93□□□□□ -0.34
AC009055.2-201ENST00000567058 ZNF530Q6P9A1 599 aaPredicted RBP12.93□□□□□ -0.34
AC009055.2-201ENST00000567058 PTF1AQ7RTS3 328 aa12.93□□□□□ -0.34
AC009055.2-201ENST00000567058 ACSBG1Q96GR2 724 aa12.93□□□□□ -0.34
AC009055.2-201ENST00000567058 PHKG2P15735 406 aa12.92□□□□□ -0.34
AC009055.2-201ENST00000567058 PRKAR2BP31323 418 aa12.92□□□□□ -0.34
AC009055.2-201ENST00000567058 CCDC184Q52MB2 194 aa12.92□□□□□ -0.34
AC009055.2-201ENST00000567058 KCNQ2O43526 872 aa12.91□□□□□ -0.34
AC009055.2-201ENST00000567058 CCDC125Q86Z20 511 aa12.91□□□□□ -0.34
AC009055.2-201ENST00000567058 IFNL2Q8IZJ0 200 aa12.91□□□□□ -0.34
AC009055.2-201ENST00000567058 RGPD3A6NKT7 1758 aaPredicted RBP12.91□□□□□ -0.34
AC009055.2-201ENST00000567058 RGPD4Q7Z3J3 1758 aa12.91□□□□□ -0.34
AC009055.2-201ENST00000567058 FCHSD2O94868 740 aa12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 ATXN8OSP0DMR3 200 aa12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 SF3B2Q13435 895 aaKnown RBP12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 MTHFSDQ2M296 383 aaKnown RBP12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 C1orf141Q5JVX7 400 aa12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 PHACTR3Q96KR7 559 aa12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 ADAMTS7Q9UKP4 1686 aa12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 KDM6AO15550 1401 aaPredicted RBP12.9□□□□□ -0.34
AC009055.2-201ENST00000567058 WDR43Q15061 677 aaKnown RBP eCLIP12.89□□□□□ -0.35
AC009055.2-201ENST00000567058 DEFB132Q7Z7B7 95 aa12.89□□□□□ -0.35
AC009055.2-201ENST00000567058 BCL11BQ9C0K0 894 aaPredicted RBP12.89□□□□□ -0.35
AC009055.2-201ENST00000567058 RREB1Q92766 1687 aa12.89□□□□□ -0.35
AC009055.2-201ENST00000567058 APBA3O96018 575 aa12.88□□□□□ -0.35
AC009055.2-201ENST00000567058 PRIM1P49642 420 aaKnown RBP12.88□□□□□ -0.35
AC009055.2-201ENST00000567058 SYTL4Q96C24 671 aaPredicted RBP12.88□□□□□ -0.35
AC009055.2-201ENST00000567058 HSP90AB1P08238 724 aaKnown RBP12.88□□□□□ -0.35
AC009055.2-201ENST00000567058 BAG6P46379 1132 aa12.88□□□□□ -0.35
AC009055.2-201ENST00000567058 AKAP4Q5JQC9 854 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms