RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 IFNLR1Q8IU57 520 aaPredicted RBP15.42■□□□□ 0.06
KARS-207ENST00000566560 PLCD3Q8N3E9 789 aa15.42■□□□□ 0.06
KARS-207ENST00000566560 PARP4Q9UKK3 1724 aaKnown RBP15.42■□□□□ 0.06
KARS-207ENST00000566560 SPATA31A5Q5VU36 1347 aa15.42■□□□□ 0.06
KARS-207ENST00000566560 SPATA31A7Q8IWB4 1347 aa15.42■□□□□ 0.06
KARS-207ENST00000566560 NLRP2Q9NX02 1062 aa15.41■□□□□ 0.06
KARS-207ENST00000566560 RGS17Q9UGC6 210 aaPredicted RBP15.41■□□□□ 0.06
KARS-207ENST00000566560 SPATA31A1Q5TZJ5 1347 aa15.41■□□□□ 0.06
KARS-207ENST00000566560 DIAPH1O60610 1272 aaKnown RBP15.4■□□□□ 0.06
KARS-207ENST00000566560 USP35Q9P2H5 1018 aa15.4■□□□□ 0.06
KARS-207ENST00000566560 THSD7AQ9UPZ6 1657 aa15.4■□□□□ 0.06
KARS-207ENST00000566560 NCAPD2Q15021 1401 aa15.4■□□□□ 0.06
KARS-207ENST00000566560 LRRC37A3O60309 1634 aa15.39■□□□□ 0.05
KARS-207ENST00000566560 CARD10Q9BWT7 1032 aa15.39■□□□□ 0.05
KARS-207ENST00000566560 QTRT2Q9H974 415 aaKnown RBP15.39■□□□□ 0.05
KARS-207ENST00000566560 IL13P35225 146 aa15.38■□□□□ 0.05
KARS-207ENST00000566560 GJD4Q96KN9 370 aaPredicted RBP15.38■□□□□ 0.05
KARS-207ENST00000566560 IGSF1Q8N6C5 1336 aa15.38■□□□□ 0.05
KARS-207ENST00000566560 NBPF6Q5VWK0 638 aa15.37■□□□□ 0.05
KARS-207ENST00000566560 TCP11L2Q8N4U5 519 aa15.37■□□□□ 0.05
KARS-207ENST00000566560 USHBP1Q8N6Y0 703 aa15.37■□□□□ 0.05
KARS-207ENST00000566560 NBPF4Q96M43 638 aa15.37■□□□□ 0.05
KARS-207ENST00000566560 MEGF6O75095 1541 aa15.37■□□□□ 0.05
KARS-207ENST00000566560 DISP2A7MBM2 1401 aa15.36■□□□□ 0.05
KARS-207ENST00000566560 U2SURPO15042 1029 aaKnown RBP15.36■□□□□ 0.05
KARS-207ENST00000566560 POTEAQ6S8J7 498 aa15.36■□□□□ 0.05
KARS-207ENST00000566560 EYA1Q99502 592 aa15.36■□□□□ 0.05
KARS-207ENST00000566560 PKD1L3Q7Z443 1732 aa15.35■□□□□ 0.05
KARS-207ENST00000566560 RBM6P78332 1123 aaKnown RBP15.35■□□□□ 0.05
KARS-207ENST00000566560 NUDCQ9Y266 331 aa15.35■□□□□ 0.05
KARS-207ENST00000566560 THRAP3Q9Y2W1 955 aaKnown RBP15.35■□□□□ 0.05
KARS-207ENST00000566560 KDRP35968 1356 aa15.35■□□□□ 0.05
KARS-207ENST00000566560 RGS12O14924 1447 aa15.34■□□□□ 0.05
KARS-207ENST00000566560 FAM98CQ17RN3 349 aaKnown RBP15.34■□□□□ 0.05
KARS-207ENST00000566560 BARGINQ6ZT62 677 aa15.34■□□□□ 0.05
KARS-207ENST00000566560 MRS2Q9HD23 443 aa15.34■□□□□ 0.05
KARS-207ENST00000566560 SHANK3Q9BYB0 1731 aa15.34■□□□□ 0.05
KARS-207ENST00000566560 A0A0G2JS52 829 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 RXRBP28702 533 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 MYT1Q01538 1121 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 AEBP1Q8IUX7 1158 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 BRWD3Q6RI45 1802 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 OVOS2A0A0G2JMS6 1433 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 TNS2Q63HR2 1409 aa15.33■□□□□ 0.04
KARS-207ENST00000566560 U2AF1L5P0DN76 240 aaPredicted RBP15.32■□□□□ 0.04
KARS-207ENST00000566560 IL2RBP14784 551 aa15.32■□□□□ 0.04
KARS-207ENST00000566560 U2AF1Q01081 240 aaKnown RBP eCLIP15.32■□□□□ 0.04
KARS-207ENST00000566560 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
KARS-207ENST00000566560 SULT6B1Q6IMI4 303 aa15.32■□□□□ 0.04
KARS-207ENST00000566560 HMOX1P09601 288 aa15.31■□□□□ 0.04
KARS-207ENST00000566560 WDR43Q15061 677 aaKnown RBP eCLIP15.31■□□□□ 0.04
KARS-207ENST00000566560 KLHL34Q8N239 644 aa15.31■□□□□ 0.04
KARS-207ENST00000566560 RAPGEF4Q8WZA2 1011 aa15.31■□□□□ 0.04
KARS-207ENST00000566560 CDCA7Q9BWT1 371 aaPredicted RBP15.31■□□□□ 0.04
KARS-207ENST00000566560 PLEKHG2Q9H7P9 1386 aa15.3■□□□□ 0.04
KARS-207ENST00000566560 CCER2I3L3R5 266 aa15.29■□□□□ 0.04
KARS-207ENST00000566560 TATP17735 454 aaPredicted RBP15.29■□□□□ 0.04
KARS-207ENST00000566560 ZBTB47Q9UFB7 747 aaPredicted RBP15.29■□□□□ 0.04
KARS-207ENST00000566560 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
KARS-207ENST00000566560 RSPH6AQ9H0K4 717 aa15.27■□□□□ 0.04
KARS-207ENST00000566560 ONECUT3O60422 494 aaPredicted RBP15.26■□□□□ 0.03
KARS-207ENST00000566560 PRKAR2BP31323 418 aa15.26■□□□□ 0.03
KARS-207ENST00000566560 DDB1Q16531 1140 aa15.26■□□□□ 0.03
KARS-207ENST00000566560 CREBZFQ9NS37 354 aa15.26■□□□□ 0.03
KARS-207ENST00000566560 CHRDL2Q6WN34 429 aa15.25■□□□□ 0.03
KARS-207ENST00000566560 PCDH11XQ9BZA7 1347 aa15.24■□□□□ 0.03
KARS-207ENST00000566560 PCDH11YQ9BZA8 1340 aa15.24■□□□□ 0.03
KARS-207ENST00000566560 FCHSD2O94868 740 aa15.24■□□□□ 0.03
KARS-207ENST00000566560 PNISRQ8TF01 805 aaKnown RBP15.24■□□□□ 0.03
KARS-207ENST00000566560 DOT1LQ8TEK3 1739 aa15.23■□□□□ 0.03
KARS-207ENST00000566560 VIRMAQ69YN4 1812 aaKnown RBP15.23■□□□□ 0.03
KARS-207ENST00000566560 ZCRB1Q8TBF4 217 aaKnown RBP15.23■□□□□ 0.03
KARS-207ENST00000566560 SPG7Q9UQ90 795 aa15.23■□□□□ 0.03
KARS-207ENST00000566560 MAPK8IP3Q9UPT6 1336 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 DLG5Q8TDM6 1919 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 EXOC5O00471 708 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 NEFMP07197 916 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 PDE3BQ13370 1112 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 PLEKHO1Q53GL0 409 aaPredicted RBP15.22■□□□□ 0.03
KARS-207ENST00000566560 SPOCK2Q92563 424 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 PNNQ9H307 717 aaKnown RBP15.22■□□□□ 0.03
KARS-207ENST00000566560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.22■□□□□ 0.033e-7■■■■□ 20.5
KARS-207ENST00000566560 ADAMTS8Q9UP79 889 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 TOGARAM1Q9Y4F4 1720 aa15.22■□□□□ 0.03
KARS-207ENST00000566560 AMOTQ4VCS5 1084 aa15.21■□□□□ 0.03
KARS-207ENST00000566560 ZNF530Q6P9A1 599 aaPredicted RBP15.2■□□□□ 0.02
KARS-207ENST00000566560 KRT27Q7Z3Y8 459 aa15.2■□□□□ 0.02
KARS-207ENST00000566560 CCDC146Q8IYE0 955 aa15.2■□□□□ 0.02
KARS-207ENST00000566560 FAM9BQ8IZU0 186 aa15.2■□□□□ 0.02
KARS-207ENST00000566560 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
KARS-207ENST00000566560 SCN11AQ9UI33 1791 aa15.19■□□□□ 0.02
KARS-207ENST00000566560 GAS2L2Q8NHY3 880 aa15.19■□□□□ 0.02
KARS-207ENST00000566560 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
KARS-207ENST00000566560 PHACTR3Q96KR7 559 aa15.19■□□□□ 0.02
KARS-207ENST00000566560 SBF2Q86WG5 1849 aa15.19■□□□□ 0.02
KARS-207ENST00000566560 NHSQ6T4R5 1651 aa15.19■□□□□ 0.02
KARS-207ENST00000566560 CYP27B1O15528 508 aa15.18■□□□□ 0.02
KARS-207ENST00000566560 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
KARS-207ENST00000566560 C1orf141Q5JVX7 400 aa15.18■□□□□ 0.02
KARS-207ENST00000566560 MARCH10Q8NA82 808 aaPredicted RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms