RNA–Protein interactions for RNA: ENST00000566491.1

RPL4-211, Transcript of ribosomal protein L4, humanhuman

TSL 2

Gene RPL4, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-211ENST00000566491 NGLY1Q96IV0 654 aa16.8■□□□□ 0.28
RPL4-211ENST00000566491 MRC1P22897 1456 aa16.8■□□□□ 0.28
RPL4-211ENST00000566491 EP400Q96L91 3159 aa16.79■□□□□ 0.28
RPL4-211ENST00000566491 VPS72Q15906 364 aa16.79■□□□□ 0.28
RPL4-211ENST00000566491 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
RPL4-211ENST00000566491 RUNDC1Q96C34 613 aa16.79■□□□□ 0.28
RPL4-211ENST00000566491 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
RPL4-211ENST00000566491 USP21Q9UK80 565 aa16.78■□□□□ 0.28
RPL4-211ENST00000566491 UBR2Q8IWV8 1755 aa16.77■□□□□ 0.28
RPL4-211ENST00000566491 EVA1CP58658 441 aa16.77■□□□□ 0.28
RPL4-211ENST00000566491 NHSQ6T4R5 1651 aa16.76■□□□□ 0.27
RPL4-211ENST00000566491 MAPK8IP3Q9UPT6 1336 aa16.75■□□□□ 0.27
RPL4-211ENST00000566491 TCP11L2Q8N4U5 519 aa16.75■□□□□ 0.27
RPL4-211ENST00000566491 KDM6AO15550 1401 aaPredicted RBP16.75■□□□□ 0.27
RPL4-211ENST00000566491 ZNF521Q96K83 1311 aa16.74■□□□□ 0.27
RPL4-211ENST00000566491 APAF1O14727 1248 aa16.74■□□□□ 0.27
RPL4-211ENST00000566491 BARGINQ6ZT62 677 aa16.74■□□□□ 0.27
RPL4-211ENST00000566491 THRAP3Q9Y2W1 955 aaKnown RBP16.74■□□□□ 0.27
RPL4-211ENST00000566491 IL2RBP14784 551 aa16.73■□□□□ 0.27
RPL4-211ENST00000566491 NFE2L2Q16236 605 aa16.73■□□□□ 0.27
RPL4-211ENST00000566491 MTHFSDQ2M296 383 aaKnown RBP16.73■□□□□ 0.27
RPL4-211ENST00000566491 PNNQ9H307 717 aaKnown RBP16.73■□□□□ 0.27
RPL4-211ENST00000566491 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
RPL4-211ENST00000566491 SENP3-EIF4A1A0A087X0R7 540 aa16.72■□□□□ 0.27
RPL4-211ENST00000566491 TMPOP42166 694 aaKnown RBP16.72■□□□□ 0.27
RPL4-211ENST00000566491 RAPGEF4Q8WZA2 1011 aa16.72■□□□□ 0.27
RPL4-211ENST00000566491 USP35Q9P2H5 1018 aa16.72■□□□□ 0.27
RPL4-211ENST00000566491 RGS17Q9UGC6 210 aaPredicted RBP16.72■□□□□ 0.27
RPL4-211ENST00000566491 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.27
RPL4-211ENST00000566491 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
RPL4-211ENST00000566491 HNRNPUQ00839 825 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPL4-211ENST00000566491 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
RPL4-211ENST00000566491 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.71■□□□□ 0.27
RPL4-211ENST00000566491 TRPC5Q9UL62 973 aaPredicted RBP16.71■□□□□ 0.27
RPL4-211ENST00000566491 BTAF1O14981 1849 aa16.7■□□□□ 0.26
RPL4-211ENST00000566491 C5P01031 1676 aa16.7■□□□□ 0.26
RPL4-211ENST00000566491 CEMIPQ8WUJ3 1361 aa16.7■□□□□ 0.26
RPL4-211ENST00000566491 GJD4Q96KN9 370 aaPredicted RBP16.7■□□□□ 0.26
RPL4-211ENST00000566491 TRIM35Q9UPQ4 493 aa16.7■□□□□ 0.26
RPL4-211ENST00000566491 RRP7AQ9Y3A4 280 aaKnown RBP16.7■□□□□ 0.26
RPL4-211ENST00000566491 TNS1Q9HBL0 1735 aaKnown RBP16.7■□□□□ 0.26
RPL4-211ENST00000566491 RGS12O14924 1447 aa16.7■□□□□ 0.26
RPL4-211ENST00000566491 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
RPL4-211ENST00000566491 GAS2L2Q8NHY3 880 aa16.69■□□□□ 0.26
RPL4-211ENST00000566491 CICQ96RK0 1608 aaPredicted RBP16.69■□□□□ 0.26
RPL4-211ENST00000566491 PCDH11XQ9BZA7 1347 aa16.69■□□□□ 0.26
RPL4-211ENST00000566491 PCDH11YQ9BZA8 1340 aa16.69■□□□□ 0.26
RPL4-211ENST00000566491 CYP27B1O15528 508 aa16.68■□□□□ 0.26
RPL4-211ENST00000566491 CCDC27Q2M243 656 aa16.68■□□□□ 0.26
RPL4-211ENST00000566491 AMOTQ4VCS5 1084 aa16.68■□□□□ 0.26
RPL4-211ENST00000566491 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
RPL4-211ENST00000566491 ZNF772Q68DY9 489 aaPredicted RBP16.67■□□□□ 0.26
RPL4-211ENST00000566491 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
RPL4-211ENST00000566491 YTHDC1Q96MU7 727 aaKnown RBP16.67■□□□□ 0.26
RPL4-211ENST00000566491 CDCA7Q9BWT1 371 aaPredicted RBP16.67■□□□□ 0.26
RPL4-211ENST00000566491 ONECUT3O60422 494 aaPredicted RBP16.66■□□□□ 0.26
RPL4-211ENST00000566491 PHKG2P15735 406 aa16.66■□□□□ 0.26
RPL4-211ENST00000566491 PLEKHO1Q53GL0 409 aaPredicted RBP16.66■□□□□ 0.26
RPL4-211ENST00000566491 NGEFQ8N5V2 710 aa16.66■□□□□ 0.26
RPL4-211ENST00000566491 CCDC9Q9Y3X0 531 aaKnown RBP16.66■□□□□ 0.26
RPL4-211ENST00000566491 LY75O60449 1722 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 KAT6BQ8WYB5 2073 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 NEFMP07197 916 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 RIPK4P57078 832 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 AKAP4Q5JQC9 854 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 ZCRB1Q8TBF4 217 aaKnown RBP16.65■□□□□ 0.26
RPL4-211ENST00000566491 QTRT2Q9H974 415 aaKnown RBP16.65■□□□□ 0.26
RPL4-211ENST00000566491 SPG7Q9UQ90 795 aa16.65■□□□□ 0.26
RPL4-211ENST00000566491 ZNF831Q5JPB2 1677 aa16.64■□□□□ 0.25
RPL4-211ENST00000566491 BCL9O00512 1426 aa16.63■□□□□ 0.25
RPL4-211ENST00000566491 TJP1Q07157 1748 aa16.63■□□□□ 0.25
RPL4-211ENST00000566491 NEUROD2Q15784 382 aa16.63■□□□□ 0.25
RPL4-211ENST00000566491 RGPD3A6NKT7 1758 aaPredicted RBP16.63■□□□□ 0.25
RPL4-211ENST00000566491 RGPD4Q7Z3J3 1758 aa16.63■□□□□ 0.25
RPL4-211ENST00000566491 COL5A3P25940 1745 aaPredicted RBP16.62■□□□□ 0.25
RPL4-211ENST00000566491 GNAT3A8MTJ3 354 aa16.62■□□□□ 0.25
RPL4-211ENST00000566491 NKX1-1Q15270 411 aaPredicted RBP16.62■□□□□ 0.25
RPL4-211ENST00000566491 POTEAQ6S8J7 498 aa16.62■□□□□ 0.25
RPL4-211ENST00000566491 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
RPL4-211ENST00000566491 KCPQ6ZWJ8 1503 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 HTATSF1O43719 755 aaKnown RBP16.61■□□□□ 0.25
RPL4-211ENST00000566491 LMOD3Q0VAK6 560 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 DCTN1Q14203 1278 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 DDB1Q16531 1140 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 MCM10Q7L590 875 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 IFNL2Q8IZJ0 200 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 SALL2Q9Y467 1007 aaPredicted RBP16.61■□□□□ 0.25
RPL4-211ENST00000566491 TAF1LQ8IZX4 1826 aa16.61■□□□□ 0.25
RPL4-211ENST00000566491 RBM6P78332 1123 aaKnown RBP16.6■□□□□ 0.25
RPL4-211ENST00000566491 C1orf141Q5JVX7 400 aa16.6■□□□□ 0.25
RPL4-211ENST00000566491 IL17REQ8NFR9 667 aa16.6■□□□□ 0.25
RPL4-211ENST00000566491 CACNA1FO60840 1977 aa16.59■□□□□ 0.25
RPL4-211ENST00000566491 RNMTO43148 476 aaKnown RBP16.59■□□□□ 0.25
RPL4-211ENST00000566491 MARCH10Q8NA82 808 aaPredicted RBP16.59■□□□□ 0.25
RPL4-211ENST00000566491 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
RPL4-211ENST00000566491 SEPT12Q8IYM1 358 aa16.58■□□□□ 0.24
RPL4-211ENST00000566491 LGR6Q9HBX8 967 aa16.58■□□□□ 0.24
RPL4-211ENST00000566491 IL16Q14005 1332 aa16.58■□□□□ 0.24
RPL4-211ENST00000566491 RREB1Q92766 1687 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms