RNA–Protein interactions for RNA: ENST00000566328.2

SMG1-212, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-212ENST00000566328 FOXK2Q01167 660 aa6.19□□□□□ -1.42
SMG1-212ENST00000566328 FOXD4L5Q5VV16 416 aaPredicted RBP6.19□□□□□ -1.42
SMG1-212ENST00000566328 FBXO31Q5XUX0 539 aaPredicted RBP6.19□□□□□ -1.42
SMG1-212ENST00000566328 WHAMMQ8TF30 809 aa6.19□□□□□ -1.42
SMG1-212ENST00000566328 HMX1Q9NP08 348 aaPredicted RBP6.19□□□□□ -1.42
SMG1-212ENST00000566328 ATP5J2-PTCD1G3V325 749 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 GPC1P35052 558 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 RFC5P40937 340 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 TMEM259Q4ZIN3 620 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 PRICKLE2Q7Z3G6 844 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 ZNF592Q92610 1267 aa6.18□□□□□ -1.42
SMG1-212ENST00000566328 ZBBXA8MT70 800 aa6.17□□□□□ -1.42
SMG1-212ENST00000566328 H7C1W4 665 aa6.17□□□□□ -1.42
SMG1-212ENST00000566328 RNF20Q5VTR2 975 aa6.17□□□□□ -1.42
SMG1-212ENST00000566328 KDF1Q8NAX2 398 aaPredicted RBP6.17□□□□□ -1.42
SMG1-212ENST00000566328 GOPCQ9HD26 462 aa6.17□□□□□ -1.42
SMG1-212ENST00000566328 CYLDQ9NQC7 956 aa6.17□□□□□ -1.42
SMG1-212ENST00000566328 MCCD1P59942 119 aaPredicted RBP6.16□□□□□ -1.42
SMG1-212ENST00000566328 TRIM22Q8IYM9 498 aa6.16□□□□□ -1.42
SMG1-212ENST00000566328 PCMTD1Q96MG8 357 aaPredicted RBP6.16□□□□□ -1.42
SMG1-212ENST00000566328 MBIPQ9NS73 344 aa6.16□□□□□ -1.42
SMG1-212ENST00000566328 PCDHB9Q9Y5E1 797 aa6.16□□□□□ -1.42
SMG1-212ENST00000566328 MEN1O00255 615 aa6.15□□□□□ -1.42
SMG1-212ENST00000566328 XP32Q5T750 250 aa6.15□□□□□ -1.42
SMG1-212ENST00000566328 LYPD4Q6UWN0 246 aa6.15□□□□□ -1.42
SMG1-212ENST00000566328 NLRP3Q96P20 1036 aa6.15□□□□□ -1.42
SMG1-212ENST00000566328 ESF1Q9H501 851 aaKnown RBP6.15□□□□□ -1.42
SMG1-212ENST00000566328 DYRK1BQ9Y463 629 aa6.15□□□□□ -1.42
SMG1-212ENST00000566328 PHF20L1A8MW92 1017 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 GIGYF1O75420 1035 aaPredicted RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 CELA2BP08218 269 aaPredicted RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 RHOQP17081 205 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 GAS6Q14393 721 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 SLC27A3Q5K4L6 730 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 RIPOR1Q6ZS17 1223 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 ZNF837Q96EG3 531 aaPredicted RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 TRERF1Q96PN7 1200 aa6.14□□□□□ -1.43
SMG1-212ENST00000566328 CUEDC1Q9NWM3 386 aaPredicted RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 NSFL1CQ9UNZ2 370 aaKnown RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 ZNF330Q9Y3S2 320 aaPredicted RBP6.14□□□□□ -1.43
SMG1-212ENST00000566328 A0A1W2PRU2 124 aa6.13□□□□□ -1.43
SMG1-212ENST00000566328 CC2D2BQ6DHV5 1058 aa6.13□□□□□ -1.43
SMG1-212ENST00000566328 PODNQ7Z5L7 613 aa6.13□□□□□ -1.43
SMG1-212ENST00000566328 BEND7Q8N7W2 519 aaPredicted RBP6.13□□□□□ -1.43
SMG1-212ENST00000566328 TRIM34Q9BYJ4 488 aa6.13□□□□□ -1.43
SMG1-212ENST00000566328 ERVK-9P63128 1117 aa6.12□□□□□ -1.43
SMG1-212ENST00000566328 WDR44Q5JSH3 913 aa6.12□□□□□ -1.43
SMG1-212ENST00000566328 CYP2U1Q7Z449 544 aa6.12□□□□□ -1.43
SMG1-212ENST00000566328 LRRC4BQ9NT99 713 aa6.12□□□□□ -1.43
SMG1-212ENST00000566328 IGF1RP08069 1367 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 FBXO45P0C2W1 286 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 BCRP11274 1271 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 CLN3Q13286 438 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 DBN1Q16643 649 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 NEDD1Q8NHV4 660 aa6.11□□□□□ -1.43
SMG1-212ENST00000566328 GAS2L1Q99501 681 aaPredicted RBP6.11□□□□□ -1.43
SMG1-212ENST00000566328 POU4F2Q12837 409 aa6.1□□□□□ -1.43
SMG1-212ENST00000566328 SPATA31C2B4DYI2 1134 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 GPR25O00155 361 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 APBB1O00213 710 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 MX2P20592 715 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 NR1H3Q13133 447 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 NBPF10Q6P3W6 841 aaKnown RBP6.09□□□□□ -1.43
SMG1-212ENST00000566328 TAS1R3Q7RTX0 852 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 NBPF15Q8N660 670 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 GTPBP3Q969Y2 492 aaKnown RBP6.09□□□□□ -1.43
SMG1-212ENST00000566328 BCANQ96GW7 911 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 GRIP2Q9C0E4 1043 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 TIMMDC1Q9NPL8 285 aa6.09□□□□□ -1.43
SMG1-212ENST00000566328 MSTNO14793 375 aa6.08□□□□□ -1.44
SMG1-212ENST00000566328 F11P03951 625 aa6.08□□□□□ -1.44
SMG1-212ENST00000566328 GJD4Q96KN9 370 aaPredicted RBP6.08□□□□□ -1.44
SMG1-212ENST00000566328 PCDHB11Q9Y5F2 797 aa6.08□□□□□ -1.44
SMG1-212ENST00000566328 WASLO00401 505 aaPredicted RBP6.07□□□□□ -1.44
SMG1-212ENST00000566328 ADAM23O75077 832 aa6.07□□□□□ -1.44
SMG1-212ENST00000566328 GNRH1P01148 92 aa6.07□□□□□ -1.44
SMG1-212ENST00000566328 GTF2E1P29083 439 aaPredicted RBP6.07□□□□□ -1.44
SMG1-212ENST00000566328 MAP2K3P46734 347 aa6.07□□□□□ -1.44
SMG1-212ENST00000566328 NUCKS1Q9H1E3 243 aaKnown RBP6.07□□□□□ -1.44
SMG1-212ENST00000566328 PHF24Q9UPV7 400 aa6.07□□□□□ -1.44
SMG1-212ENST00000566328 CNTNAP5Q8WYK1 1306 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 SOCS7O14512 581 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 TRAK2O60296 914 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 MYCP01106 439 aaPredicted RBP6.06□□□□□ -1.44
SMG1-212ENST00000566328 BANK1Q8NDB2 785 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 ACDQ96AP0 544 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 DCAF5Q96JK2 942 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 CFHR5Q9BXR6 569 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 ARHGEF10LQ9HCE6 1279 aa6.06□□□□□ -1.44
SMG1-212ENST00000566328 OIP5O43482 229 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 SCTRP47872 440 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 PLA2G4EQ3MJ16 856 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 CNKSR1Q969H4 720 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 ESYT1Q9BSJ8 1104 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 OXCT2Q9BYC2 517 aaPredicted RBP6.05□□□□□ -1.44
SMG1-212ENST00000566328 OSBPL3Q9H4L5 887 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 NDUFB9Q9Y6M9 179 aa6.05□□□□□ -1.44
SMG1-212ENST00000566328 A0A1B0GTH6 734 aa6.04□□□□□ -1.44
SMG1-212ENST00000566328 IL27Q8NEV9 243 aa6.04□□□□□ -1.44
SMG1-212ENST00000566328 SPOCK3Q9BQ16 436 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms