RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 MYH16Q9H6N6 1097 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 IL16Q14005 1332 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 RNF123Q5XPI4 1314 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 RGPD5Q99666 1765 aa12.81□□□□□ -0.36
SF3B3-207ENST00000566095 PLCH1Q4KWH8 1693 aa12.8□□□□□ -0.36
SF3B3-207ENST00000566095 SALL2Q9Y467 1007 aaPredicted RBP12.8□□□□□ -0.36
SF3B3-207ENST00000566095 PARP4Q9UKK3 1724 aaKnown RBP12.79□□□□□ -0.36
SF3B3-207ENST00000566095 GNAT3A8MTJ3 354 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 IL2RBP14784 551 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 AKAP4Q5JQC9 854 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 UNC5CLQ8IV45 518 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 WWC1Q8IX03 1113 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 TRMT2AQ8IZ69 625 aaKnown RBP12.79□□□□□ -0.36
SF3B3-207ENST00000566095 USHBP1Q8N6Y0 703 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 MAP3K5Q99683 1374 aa12.79□□□□□ -0.36
SF3B3-207ENST00000566095 SLIT2O94813 1529 aa12.78□□□□□ -0.36
SF3B3-207ENST00000566095 NEFLP07196 543 aa12.78□□□□□ -0.36
SF3B3-207ENST00000566095 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
SF3B3-207ENST00000566095 CCDC9Q9Y3X0 531 aaKnown RBP12.78□□□□□ -0.36
SF3B3-207ENST00000566095 GTF3C3Q9Y5Q9 886 aa12.78□□□□□ -0.36
SF3B3-207ENST00000566095 CT47B1P0C2W7 299 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-207ENST00000566095 GNAI1P63096 354 aa12.77□□□□□ -0.37
SF3B3-207ENST00000566095 ZNF530Q6P9A1 599 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-207ENST00000566095 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
SF3B3-207ENST00000566095 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
SF3B3-207ENST00000566095 PHACTR3Q96KR7 559 aa12.77□□□□□ -0.37
SF3B3-207ENST00000566095 RRP7AQ9Y3A4 280 aaKnown RBP12.77□□□□□ -0.37
SF3B3-207ENST00000566095 PCDH11XQ9BZA7 1347 aa12.77□□□□□ -0.37
SF3B3-207ENST00000566095 PCDH11YQ9BZA8 1340 aa12.77□□□□□ -0.37
SF3B3-207ENST00000566095 MTHFSDQ2M296 383 aaKnown RBP12.76□□□□□ -0.37
SF3B3-207ENST00000566095 IFNL2Q8IZJ0 200 aa12.76□□□□□ -0.37
SF3B3-207ENST00000566095 CHMP4AQ9BY43 222 aa12.76□□□□□ -0.37
SF3B3-207ENST00000566095 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
SF3B3-207ENST00000566095 USP21Q9UK80 565 aa12.76□□□□□ -0.37
SF3B3-207ENST00000566095 OVOS2A0A0G2JMS6 1433 aa12.76□□□□□ -0.37
SF3B3-207ENST00000566095 RGPD2P0DJD1 1756 aa12.75□□□□□ -0.37
SF3B3-207ENST00000566095 VPS72Q15906 364 aa12.75□□□□□ -0.37
SF3B3-207ENST00000566095 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
SF3B3-207ENST00000566095 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.75□□□□□ -0.37
SF3B3-207ENST00000566095 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
SF3B3-207ENST00000566095 NRAPQ86VF7 1730 aa12.74□□□□□ -0.37
SF3B3-207ENST00000566095 SPATA31A1Q5TZJ5 1347 aa12.74□□□□□ -0.37
SF3B3-207ENST00000566095 SPATA31A5Q5VU36 1347 aa12.74□□□□□ -0.37
SF3B3-207ENST00000566095 SPATA31A7Q8IWB4 1347 aa12.74□□□□□ -0.37
SF3B3-207ENST00000566095 BARGINQ6ZT62 677 aa12.74□□□□□ -0.37
SF3B3-207ENST00000566095 EXOC5O00471 708 aa12.73□□□□□ -0.37
SF3B3-207ENST00000566095 SLFN5Q08AF3 891 aa12.73□□□□□ -0.37
SF3B3-207ENST00000566095 TEFQ10587 303 aa12.73□□□□□ -0.37
SF3B3-207ENST00000566095 ZNF772Q68DY9 489 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-207ENST00000566095 TRPC5Q9UL62 973 aaPredicted RBP12.73□□□□□ -0.37
SF3B3-207ENST00000566095 TRIM35Q9UPQ4 493 aa12.73□□□□□ -0.37
SF3B3-207ENST00000566095 LRP6O75581 1613 aa12.73□□□□□ -0.37
SF3B3-207ENST00000566095 AFF2P51816 1311 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 PKD1L3Q7Z443 1732 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 DCAF5Q96JK2 942 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 USP35Q9P2H5 1018 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 MEGF6O75095 1541 aa12.72□□□□□ -0.37
SF3B3-207ENST00000566095 DUSP27Q5VZP5 1158 aa12.71□□□□□ -0.37
SF3B3-207ENST00000566095 ZNF428Q96B54 188 aa12.71□□□□□ -0.37
SF3B3-207ENST00000566095 DLG5Q8TDM6 1919 aa12.7□□□□□ -0.38
SF3B3-207ENST00000566095 SOS1Q07889 1333 aaPredicted RBP12.7□□□□□ -0.38
SF3B3-207ENST00000566095 PHKG2P15735 406 aa12.7□□□□□ -0.38
SF3B3-207ENST00000566095 BCL9LQ86UU0 1499 aa12.7□□□□□ -0.38
SF3B3-207ENST00000566095 DISP2A7MBM2 1401 aa12.7□□□□□ -0.38
SF3B3-207ENST00000566095 TNS2Q63HR2 1409 aa12.7□□□□□ -0.38
SF3B3-207ENST00000566095 TAF7Q15545 349 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-207ENST00000566095 DDB1Q16531 1140 aa12.69□□□□□ -0.38
SF3B3-207ENST00000566095 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.69□□□□□ -0.38
SF3B3-207ENST00000566095 RCAN3Q9UKA8 241 aa12.69□□□□□ -0.38
SF3B3-207ENST00000566095 LAS1LQ9Y4W2 734 aaKnown RBP12.69□□□□□ -0.38
SF3B3-207ENST00000566095 CEMIPQ8WUJ3 1361 aa12.69□□□□□ -0.38
SF3B3-207ENST00000566095 WNK3Q9BYP7 1800 aa12.68□□□□□ -0.38
SF3B3-207ENST00000566095 RNMTO43148 476 aaKnown RBP12.68□□□□□ -0.38
SF3B3-207ENST00000566095 MCM10Q7L590 875 aa12.68□□□□□ -0.38
SF3B3-207ENST00000566095 SENP3-EIF4A1A0A087X0R7 540 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 A0A0G2JS52 829 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 ERVV-2B6SEH9 535 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 MYT1Q01538 1121 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 NKX1-1Q15270 411 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-207ENST00000566095 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 GJD4Q96KN9 370 aaPredicted RBP12.67□□□□□ -0.38
SF3B3-207ENST00000566095 TSPYL4Q9UJ04 414 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 SUPT16HQ9Y5B9 1047 aaKnown RBP12.67□□□□□ -0.38
SF3B3-207ENST00000566095 ATRNO75882 1429 aa12.67□□□□□ -0.38
SF3B3-207ENST00000566095 LRRC37A3O60309 1634 aa12.66□□□□□ -0.38
SF3B3-207ENST00000566095 FANCIQ9NVI1 1328 aa12.66□□□□□ -0.38
SF3B3-207ENST00000566095 CHL1O00533 1208 aa12.66□□□□□ -0.38
SF3B3-207ENST00000566095 CABP4P57796 275 aa12.66□□□□□ -0.38
SF3B3-207ENST00000566095 AAMPQ13685 434 aa12.66□□□□□ -0.38
SF3B3-207ENST00000566095 ZNF853P0CG23 659 aa12.65□□□□□ -0.38
SF3B3-207ENST00000566095 DCTN1Q14203 1278 aa12.65□□□□□ -0.38
SF3B3-207ENST00000566095 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
SF3B3-207ENST00000566095 DDX54Q8TDD1 881 aaKnown RBP12.65□□□□□ -0.38
SF3B3-207ENST00000566095 BTBD11A6QL63 1104 aa12.64□□□□□ -0.39
SF3B3-207ENST00000566095 CYP27B1O15528 508 aa12.64□□□□□ -0.39
SF3B3-207ENST00000566095 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
SF3B3-207ENST00000566095 PELP1Q8IZL8 1130 aaKnown RBP12.64□□□□□ -0.39
SF3B3-207ENST00000566095 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
SF3B3-207ENST00000566095 IL17REQ8NFR9 667 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms