RNA–Protein interactions for RNA: ENST00000560825.5

GABPB1-210, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-210ENST00000560825 HSPA5P11021 654 aaKnown RBP15.62■□□□□ 0.09
GABPB1-210ENST00000560825 HSP90AB2PQ58FF8 381 aa15.62■□□□□ 0.09
GABPB1-210ENST00000560825 NBPF6Q5VWK0 638 aa15.62■□□□□ 0.09
GABPB1-210ENST00000560825 NBPF4Q96M43 638 aa15.62■□□□□ 0.09
GABPB1-210ENST00000560825 TOGARAM1Q9Y4F4 1720 aa15.61■□□□□ 0.09
GABPB1-210ENST00000560825 PLSCR1O15162 318 aa15.61■□□□□ 0.09
GABPB1-210ENST00000560825 AMPHP49418 695 aa15.61■□□□□ 0.09
GABPB1-210ENST00000560825 EMILIN1Q9Y6C2 1016 aa15.61■□□□□ 0.09
GABPB1-210ENST00000560825 POLR3GLQ9BT43 218 aa15.6■□□□□ 0.09
GABPB1-210ENST00000560825 LY75O60449 1722 aa15.59■□□□□ 0.09
GABPB1-210ENST00000560825 DDX54Q8TDD1 881 aaKnown RBP15.59■□□□□ 0.09
GABPB1-210ENST00000560825 RTL1A6NKG5 1358 aa15.58■□□□□ 0.08
GABPB1-210ENST00000560825 TXNRD1Q16881 649 aa15.58■□□□□ 0.08
GABPB1-210ENST00000560825 ITGB4P16144 1822 aa15.58■□□□□ 0.08
GABPB1-210ENST00000560825 UTRNP46939 3433 aa15.57■□□□□ 0.08
GABPB1-210ENST00000560825 PKD1L3Q7Z443 1732 aa15.57■□□□□ 0.08
GABPB1-210ENST00000560825 NSD2O96028 1365 aa15.57■□□□□ 0.08
GABPB1-210ENST00000560825 SLC24A1O60721 1099 aa15.57■□□□□ 0.08
GABPB1-210ENST00000560825 KCNQ4P56696 695 aa15.56■□□□□ 0.08
GABPB1-210ENST00000560825 INSRP06213 1382 aa15.56■□□□□ 0.08
GABPB1-210ENST00000560825 CDCA8Q53HL2 280 aa15.55■□□□□ 0.08
GABPB1-210ENST00000560825 LRRC4BQ9NT99 713 aa15.55■□□□□ 0.08
GABPB1-210ENST00000560825 FLT4P35916 1363 aa15.54■□□□□ 0.08
GABPB1-210ENST00000560825 TNNT2P45379 298 aaPredicted RBP15.53■□□□□ 0.08
GABPB1-210ENST00000560825 EIF4G2P78344 907 aaKnown RBP eCLIP15.53■□□□□ 0.08
GABPB1-210ENST00000560825 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
GABPB1-210ENST00000560825 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
GABPB1-210ENST00000560825 PPM1GO15355 546 aaPredicted RBP15.51■□□□□ 0.07
GABPB1-210ENST00000560825 PRIM1P49642 420 aaKnown RBP15.51■□□□□ 0.07
GABPB1-210ENST00000560825 GOLGB1Q14789 3259 aaKnown RBP15.51■□□□□ 0.07
GABPB1-210ENST00000560825 NCAPD2Q15021 1401 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 QSER1Q2KHR3 1735 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 TAF1LQ8IZX4 1826 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 ZCRB1Q8TBF4 217 aaKnown RBP15.51■□□□□ 0.07
GABPB1-210ENST00000560825 PANK3Q9H999 370 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 POLKQ9UBT6 870 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 ZBTB7AO95365 584 aa15.51■□□□□ 0.07
GABPB1-210ENST00000560825 SLC15A2Q16348 729 aa15.5■□□□□ 0.07
GABPB1-210ENST00000560825 CYP27B1O15528 508 aa15.49■□□□□ 0.07
GABPB1-210ENST00000560825 SYTL4Q96C24 671 aaPredicted RBP15.49■□□□□ 0.07
GABPB1-210ENST00000560825 C5P01031 1676 aa15.49■□□□□ 0.07
GABPB1-210ENST00000560825 SMG6Q86US8 1419 aaKnown RBP15.48■□□□□ 0.07
GABPB1-210ENST00000560825 COL24A1Q17RW2 1714 aa15.48■□□□□ 0.07
GABPB1-210ENST00000560825 CGNL1Q0VF96 1302 aa15.48■□□□□ 0.07
GABPB1-210ENST00000560825 PTGER2P43116 358 aa15.48■□□□□ 0.07
GABPB1-210ENST00000560825 ATF5Q9Y2D1 282 aaPredicted RBP15.48■□□□□ 0.07
GABPB1-210ENST00000560825 KIF24Q5T7B8 1368 aa15.47■□□□□ 0.07
GABPB1-210ENST00000560825 EYA1Q99502 592 aa15.47■□□□□ 0.07
GABPB1-210ENST00000560825 WASHC2AQ641Q2 1341 aa15.46■□□□□ 0.07
GABPB1-210ENST00000560825 KIF7Q2M1P5 1343 aa15.45■□□□□ 0.06
GABPB1-210ENST00000560825 EIF4A2Q14240 407 aaKnown RBP15.45■□□□□ 0.06
GABPB1-210ENST00000560825 SPON1Q9HCB6 807 aa15.45■□□□□ 0.06
GABPB1-210ENST00000560825 STK32BQ9NY57 414 aa15.45■□□□□ 0.06
GABPB1-210ENST00000560825 TATP17735 454 aaPredicted RBP15.44■□□□□ 0.06
GABPB1-210ENST00000560825 RAPGEF4Q8WZA2 1011 aa15.44■□□□□ 0.06
GABPB1-210ENST00000560825 AKT1S1Q96B36 256 aa15.44■□□□□ 0.06
GABPB1-210ENST00000560825 SGIP1Q9BQI5 828 aa15.43■□□□□ 0.06
GABPB1-210ENST00000560825 VIRMAQ69YN4 1812 aaKnown RBP15.43■□□□□ 0.06
GABPB1-210ENST00000560825 PNPLA7Q6ZV29 1317 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 PCDH11XQ9BZA7 1347 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 PCDH11YQ9BZA8 1340 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 SMIM5Q71RC9 77 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 AMIGO3Q86WK7 504 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 UBR3Q6ZT12 1888 aa15.41■□□□□ 0.06
GABPB1-210ENST00000560825 C4BP0C0L5 1744 aa15.4■□□□□ 0.06
GABPB1-210ENST00000560825 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
GABPB1-210ENST00000560825 MPRIPQ6WCQ1 1025 aa15.4■□□□□ 0.06
GABPB1-210ENST00000560825 AEBP1Q8IUX7 1158 aa15.39■□□□□ 0.05
GABPB1-210ENST00000560825 PPP1R1BQ9UD71 204 aaPredicted RBP15.39■□□□□ 0.05
GABPB1-210ENST00000560825 IGSF1Q8N6C5 1336 aa15.38■□□□□ 0.05
GABPB1-210ENST00000560825 PER1O15534 1290 aaPredicted RBP15.37■□□□□ 0.05
GABPB1-210ENST00000560825 SLC27A3Q5K4L6 730 aa15.37■□□□□ 0.05
GABPB1-210ENST00000560825 PIGBQ92521 554 aa15.37■□□□□ 0.05
GABPB1-210ENST00000560825 CCNL1Q9UK58 526 aaPredicted RBP15.37■□□□□ 0.05
GABPB1-210ENST00000560825 PALLDQ8WX93 1383 aa15.37■□□□□ 0.05
GABPB1-210ENST00000560825 NKX1-1Q15270 411 aaPredicted RBP15.36■□□□□ 0.05
GABPB1-210ENST00000560825 MORC1Q86VD1 984 aa15.36■□□□□ 0.05
GABPB1-210ENST00000560825 MTFR1LQ9H019 292 aa15.36■□□□□ 0.05
GABPB1-210ENST00000560825 PHKG2P15735 406 aa15.35■□□□□ 0.05
GABPB1-210ENST00000560825 FHDC1Q9C0D6 1143 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-210ENST00000560825 SCN11AQ9UI33 1791 aa15.35■□□□□ 0.05
GABPB1-210ENST00000560825 KDM6AO15550 1401 aaPredicted RBP15.35■□□□□ 0.05
GABPB1-210ENST00000560825 CNGB1Q14028 1251 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-210ENST00000560825 COL5A3P25940 1745 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-210ENST00000560825 COL23A1Q86Y22 540 aaPredicted RBP15.34■□□□□ 0.05
GABPB1-210ENST00000560825 TFCP2L1Q9NZI6 479 aa15.34■□□□□ 0.05
GABPB1-210ENST00000560825 ASAP1Q9ULH1 1129 aa15.34■□□□□ 0.05
GABPB1-210ENST00000560825 SYT17Q9BSW7 474 aa15.33■□□□□ 0.04
GABPB1-210ENST00000560825 KNSTRNQ9Y448 316 aa15.33■□□□□ 0.04
GABPB1-210ENST00000560825 IL13P35225 146 aa15.32■□□□□ 0.04
GABPB1-210ENST00000560825 CC2D1BQ5T0F9 858 aaKnown RBP15.32■□□□□ 0.04
GABPB1-210ENST00000560825 SPG7Q9UQ90 795 aa15.32■□□□□ 0.04
GABPB1-210ENST00000560825 ITPK1Q13572 414 aa15.31■□□□□ 0.04
GABPB1-210ENST00000560825 MSL1Q68DK7 614 aa15.31■□□□□ 0.04
GABPB1-210ENST00000560825 SLC4A9Q96Q91 983 aa15.31■□□□□ 0.04
GABPB1-210ENST00000560825 MYH14Q7Z406 1995 aaKnown RBP15.31■□□□□ 0.04
GABPB1-210ENST00000560825 COL3A1P02461 1466 aaPredicted RBP15.31■□□□□ 0.04
GABPB1-210ENST00000560825 TJP1Q07157 1748 aa15.3■□□□□ 0.04
GABPB1-210ENST00000560825 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
GABPB1-210ENST00000560825 ARXQ96QS3 562 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms