RNA–Protein interactions for RNA: ENST00000559376.1

SEC11A-207, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

Gene SEC11A, Length 2,204 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-207ENST00000559376 RBM27Q9P2N5 1060 aaKnown RBP12.89□□□□□ -0.35
SEC11A-207ENST00000559376 PRPF40AO75400 957 aaKnown RBP12.89□□□□□ -0.35
SEC11A-207ENST00000559376 PRIM1P49642 420 aaKnown RBP12.89□□□□□ -0.35
SEC11A-207ENST00000559376 TWISTNBQ3B726 338 aaPredicted RBP12.89□□□□□ -0.35
SEC11A-207ENST00000559376 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
SEC11A-207ENST00000559376 MYO5BQ9ULV0 1848 aa12.89□□□□□ -0.35
SEC11A-207ENST00000559376 DLG5Q8TDM6 1919 aa12.89□□□□□ -0.35
SEC11A-207ENST00000559376 BRD2P25440 801 aaKnown RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 INTS3Q68E01 1043 aaKnown RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 IFNLR1Q8IU57 520 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 ZGPATQ8N5A5 531 aaKnown RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 CLTCQ00610 1675 aaKnown RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 XPCQ01831 940 aaPredicted RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 HS1BP3Q53T59 392 aa12.88□□□□□ -0.35
SEC11A-207ENST00000559376 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 IFT57Q9NWB7 429 aa12.88□□□□□ -0.35
SEC11A-207ENST00000559376 NOL7Q9UMY1 257 aaKnown RBP12.88□□□□□ -0.35
SEC11A-207ENST00000559376 PTPRMP28827 1452 aa12.87□□□□□ -0.35
SEC11A-207ENST00000559376 GPT2Q8TD30 523 aa12.87□□□□□ -0.35
SEC11A-207ENST00000559376 API5Q9BZZ5 524 aaKnown RBP12.87□□□□□ -0.35
SEC11A-207ENST00000559376 CWC22Q9HCG8 908 aaKnown RBP12.87□□□□□ -0.35
SEC11A-207ENST00000559376 ST18O60284 1047 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 C8orf58Q8NAV2 365 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 OTUD7AQ8TE49 926 aaPredicted RBP12.86□□□□□ -0.35
SEC11A-207ENST00000559376 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 DCTPP1Q9H773 170 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.86□□□□□ -0.35
SEC11A-207ENST00000559376 CABP1Q9NZU7 370 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 POLKQ9UBT6 870 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 APBB1O00213 710 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 TERF1P54274 439 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 CHAMP1Q96JM3 812 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 FAM13BQ9NYF5 915 aa12.86□□□□□ -0.35
SEC11A-207ENST00000559376 ASXL2Q76L83 1435 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 ZNF500O60304 480 aaPredicted RBP12.85□□□□□ -0.35
SEC11A-207ENST00000559376 DHX37Q8IY37 1157 aaKnown RBP12.85□□□□□ -0.35
SEC11A-207ENST00000559376 ZNF853P0CG23 659 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 SDSP20132 328 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 FOXD4L5Q5VV16 416 aaPredicted RBP12.85□□□□□ -0.35
SEC11A-207ENST00000559376 CASC1Q6TDU7 716 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 FOXD4L4Q8WXT5 416 aaPredicted RBP12.85□□□□□ -0.35
SEC11A-207ENST00000559376 CDK19Q9BWU1 502 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 ZDHHC9Q9Y397 364 aa12.85□□□□□ -0.35
SEC11A-207ENST00000559376 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
SEC11A-207ENST00000559376 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
SEC11A-207ENST00000559376 TMEM63CQ9P1W3 806 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 YTHDC2Q9H6S0 1430 aaKnown RBP12.84□□□□□ -0.35
SEC11A-207ENST00000559376 UQCRHLA0A096LP55 91 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 SYCE3A1L190 88 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 UQCRHP07919 91 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 IDI1Q13907 227 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
SEC11A-207ENST00000559376 LRSAM1Q6UWE0 723 aa12.83□□□□□ -0.36
SEC11A-207ENST00000559376 NSFL1CQ9UNZ2 370 aaKnown RBP12.83□□□□□ -0.36
SEC11A-207ENST00000559376 POGZQ7Z3K3 1410 aa12.83□□□□□ -0.36
SEC11A-207ENST00000559376 FAM83GA6ND36 823 aa12.82□□□□□ -0.36
SEC11A-207ENST00000559376 ANKRD44Q8N8A2 993 aa12.82□□□□□ -0.36
SEC11A-207ENST00000559376 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
SEC11A-207ENST00000559376 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
SEC11A-207ENST00000559376 KIF24Q5T7B8 1368 aa12.82□□□□□ -0.36
SEC11A-207ENST00000559376 MLH3Q9UHC1 1453 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 REC8O95072 547 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 DCTN1Q14203 1278 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 RNF214Q8ND24 703 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 RIMS2Q9UQ26 1411 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 CCDC39Q9UFE4 941 aa12.81□□□□□ -0.36
SEC11A-207ENST00000559376 IL13P35225 146 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 LMOD3Q0VAK6 560 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 CSPP1Q1MSJ5 1256 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 CEP85Q6P2H3 762 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 MAP7D2Q96T17 732 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 ERC2O15083 957 aa12.8□□□□□ -0.36
SEC11A-207ENST00000559376 ARHGEF40Q8TER5 1519 aa12.79□□□□□ -0.36
SEC11A-207ENST00000559376 MCM5P33992 734 aa12.79□□□□□ -0.36
SEC11A-207ENST00000559376 RPAP2Q8IXW5 612 aaPredicted RBP12.79□□□□□ -0.36
SEC11A-207ENST00000559376 MSH6P52701 1360 aa12.79□□□□□ -0.36
SEC11A-207ENST00000559376 NEK4P51957 841 aa12.78□□□□□ -0.36
SEC11A-207ENST00000559376 MBD3O95983 291 aa12.78□□□□□ -0.36
SEC11A-207ENST00000559376 KRT24Q2M2I5 525 aa12.78□□□□□ -0.36
SEC11A-207ENST00000559376 TMX3Q96JJ7 454 aa12.78□□□□□ -0.36
SEC11A-207ENST00000559376 RTL1A6NKG5 1358 aa12.77□□□□□ -0.36
SEC11A-207ENST00000559376 PTMAP06454 111 aaKnown RBP12.77□□□□□ -0.36
SEC11A-207ENST00000559376 MEIS3Q99687 375 aa12.77□□□□□ -0.36
SEC11A-207ENST00000559376 TMEM131LA2VDJ0 1609 aa12.77□□□□□ -0.37
SEC11A-207ENST00000559376 DYNC1I1O14576 645 aa12.77□□□□□ -0.37
SEC11A-207ENST00000559376 SASS6Q6UVJ0 657 aa12.77□□□□□ -0.37
SEC11A-207ENST00000559376 ZRANB1Q9UGI0 708 aa12.77□□□□□ -0.37
SEC11A-207ENST00000559376 RGS12O14924 1447 aa12.77□□□□□ -0.37
SEC11A-207ENST00000559376 NOL8Q76FK4 1167 aaKnown RBP12.76□□□□□ -0.37
SEC11A-207ENST00000559376 NME9Q86XW9 330 aa12.76□□□□□ -0.37
SEC11A-207ENST00000559376 SLC52A1Q9NWF4 448 aa12.76□□□□□ -0.37
SEC11A-207ENST00000559376 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
SEC11A-207ENST00000559376 TCHHQ07283 1943 aa12.76□□□□□ -0.37
SEC11A-207ENST00000559376 TSPY26PQ9H489 355 aa12.76□□□□□ -0.37
SEC11A-207ENST00000559376 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
SEC11A-207ENST00000559376 ATP7BP35670 1465 aa12.75□□□□□ -0.37
SEC11A-207ENST00000559376 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
SEC11A-207ENST00000559376 FOXD4L6Q3SYB3 417 aaPredicted RBP12.75□□□□□ -0.37
SEC11A-207ENST00000559376 FOXD4L3Q6VB84 417 aaPredicted RBP12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms