RNA–Protein interactions for RNA: ENST00000555363.1

SEC23A-209, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 2

Gene SEC23A, Length 704 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-209ENST00000555363 MTMR14Q8NCE2 650 aa11.03□□□□□ -0.64
SEC23A-209ENST00000555363 COL25A1Q9BXS0 654 aaPredicted RBP11.03□□□□□ -0.64
SEC23A-209ENST00000555363 PRM3Q9NNZ6 103 aa11.03□□□□□ -0.64
SEC23A-209ENST00000555363 SNRKQ9NRH2 765 aa11.03□□□□□ -0.64
SEC23A-209ENST00000555363 PCDHB11Q9Y5F2 797 aa11.03□□□□□ -0.64
SEC23A-209ENST00000555363 KDF1Q8NAX2 398 aaPredicted RBP11.02□□□□□ -0.65
SEC23A-209ENST00000555363 NANOS1Q8WY41 292 aaKnown RBP11.02□□□□□ -0.65
SEC23A-209ENST00000555363 NLRP3Q96P20 1036 aa11.02□□□□□ -0.65
SEC23A-209ENST00000555363 RHOQP17081 205 aa11□□□□□ -0.65
SEC23A-209ENST00000555363 SLC27A3Q5K4L6 730 aa11□□□□□ -0.65
SEC23A-209ENST00000555363 CYP2U1Q7Z449 544 aa11□□□□□ -0.65
SEC23A-209ENST00000555363 SOCS7O14512 581 aa10.99□□□□□ -0.65
SEC23A-209ENST00000555363 RNF144AP50876 292 aaPredicted RBP10.99□□□□□ -0.65
SEC23A-209ENST00000555363 A0A1W2PRU2 124 aa10.98□□□□□ -0.65
SEC23A-209ENST00000555363 ERVK-9P63128 1117 aa10.98□□□□□ -0.65
SEC23A-209ENST00000555363 KRT76Q01546 638 aa10.98□□□□□ -0.65
SEC23A-209ENST00000555363 SENP3-EIF4A1A0A087X0R7 540 aa10.97□□□□□ -0.65
SEC23A-209ENST00000555363 GPC1P35052 558 aa10.96□□□□□ -0.65
SEC23A-209ENST00000555363 RIPOR1Q6ZS17 1223 aa10.95□□□□□ -0.66
SEC23A-209ENST00000555363 SVOPQ8N4V2 548 aa10.95□□□□□ -0.66
SEC23A-209ENST00000555363 MYCP01106 439 aaPredicted RBP10.94□□□□□ -0.66
SEC23A-209ENST00000555363 SCTRP47872 440 aa10.94□□□□□ -0.66
SEC23A-209ENST00000555363 RNFT1Q5M7Z0 435 aa10.94□□□□□ -0.66
SEC23A-209ENST00000555363 ARHGEF10LQ9HCE6 1279 aa10.93□□□□□ -0.66
SEC23A-209ENST00000555363 TBC1D2BQ9UPU7 963 aa10.93□□□□□ -0.66
SEC23A-209ENST00000555363 EIF4G2P78344 907 aaKnown RBP eCLIP10.92□□□□□ -0.66
SEC23A-209ENST00000555363 POU4F2Q12837 409 aa10.92□□□□□ -0.66
SEC23A-209ENST00000555363 FOXR1Q6PIV2 292 aa10.92□□□□□ -0.66
SEC23A-209ENST00000555363 GAS2L1Q99501 681 aaPredicted RBP10.92□□□□□ -0.66
SEC23A-209ENST00000555363 GTF3C3Q9Y5Q9 886 aa10.92□□□□□ -0.66
SEC23A-209ENST00000555363 CLN3Q13286 438 aa10.91□□□□□ -0.66
SEC23A-209ENST00000555363 CEP126Q9P2H0 1117 aa10.91□□□□□ -0.66
SEC23A-209ENST00000555363 GPR37L1O60883 481 aa10.9□□□□□ -0.66
SEC23A-209ENST00000555363 OSBPL3Q9H4L5 887 aa10.9□□□□□ -0.66
SEC23A-209ENST00000555363 RAB6BQ9NRW1 208 aa10.9□□□□□ -0.66
SEC23A-209ENST00000555363 GTF2E1P29083 439 aaPredicted RBP10.89□□□□□ -0.67
SEC23A-209ENST00000555363 TMEM132AQ24JP5 1023 aa10.89□□□□□ -0.67
SEC23A-209ENST00000555363 CUEDC1Q9NWM3 386 aaPredicted RBP10.89□□□□□ -0.67
SEC23A-209ENST00000555363 H7C1W4 665 aa10.88□□□□□ -0.67
SEC23A-209ENST00000555363 GNRH1P01148 92 aa10.88□□□□□ -0.67
SEC23A-209ENST00000555363 SLFNL1Q499Z3 407 aa10.88□□□□□ -0.67
SEC23A-209ENST00000555363 GMCL1Q96IK5 515 aa10.88□□□□□ -0.67
SEC23A-209ENST00000555363 ADAMTS8Q9UP79 889 aa10.88□□□□□ -0.67
SEC23A-209ENST00000555363 ZNF385CQ66K41 422 aaPredicted RBP10.87□□□□□ -0.67
SEC23A-209ENST00000555363 TRIM22Q8IYM9 498 aa10.87□□□□□ -0.67
SEC23A-209ENST00000555363 TIMMDC1Q9NPL8 285 aa10.87□□□□□ -0.67
SEC23A-209ENST00000555363 DYRK1BQ9Y463 629 aa10.87□□□□□ -0.67
SEC23A-209ENST00000555363 RNF225M0QZC1 329 aaPredicted RBP10.86□□□□□ -0.67
SEC23A-209ENST00000555363 TRAK2O60296 914 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 ADAMTS2O95450 1211 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 ABL2P42684 1182 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 MAP3K10Q02779 954 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 NBPF10Q6P3W6 841 aaKnown RBP10.86□□□□□ -0.67
SEC23A-209ENST00000555363 TAS1R3Q7RTX0 852 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 NBPF15Q8N660 670 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 TRERF1Q96PN7 1200 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 CCDC85AQ96PX6 553 aaPredicted RBP10.86□□□□□ -0.67
SEC23A-209ENST00000555363 CDCA7Q9BWT1 371 aaPredicted RBP10.86□□□□□ -0.67
SEC23A-209ENST00000555363 GRIP2Q9C0E4 1043 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 TIMELESSQ9UNS1 1208 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 DOLKQ9UPQ8 538 aa10.86□□□□□ -0.67
SEC23A-209ENST00000555363 SLURP2P0DP57 97 aa10.85□□□□□ -0.67
SEC23A-209ENST00000555363 MARSP56192 900 aaKnown RBP10.85□□□□□ -0.67
SEC23A-209ENST00000555363 CNKSR1Q969H4 720 aa10.85□□□□□ -0.67
SEC23A-209ENST00000555363 ZNF837Q96EG3 531 aaPredicted RBP10.85□□□□□ -0.67
SEC23A-209ENST00000555363 GPR25O00155 361 aa10.84□□□□□ -0.67
SEC23A-209ENST00000555363 WASLO00401 505 aaPredicted RBP10.84□□□□□ -0.67
SEC23A-209ENST00000555363 SRSF11Q05519 484 aaKnown RBP10.84□□□□□ -0.67
SEC23A-209ENST00000555363 RNF135Q8IUD6 432 aa10.84□□□□□ -0.67
SEC23A-209ENST00000555363 WHAMMQ8TF30 809 aa10.84□□□□□ -0.67
SEC23A-209ENST00000555363 ESYT1Q9BSJ8 1104 aa10.84□□□□□ -0.67
SEC23A-209ENST00000555363 VAC14Q08AM6 782 aa10.83□□□□□ -0.68
SEC23A-209ENST00000555363 KCNMA1Q12791 1236 aa10.83□□□□□ -0.68
SEC23A-209ENST00000555363 USP4Q13107 963 aa10.83□□□□□ -0.68
SEC23A-209ENST00000555363 ESCO1Q5FWF5 840 aa10.83□□□□□ -0.68
SEC23A-209ENST00000555363 ZSCAN10Q96SZ4 725 aaPredicted RBP10.83□□□□□ -0.68
SEC23A-209ENST00000555363 GDPD2Q9HCC8 539 aa10.83□□□□□ -0.68
SEC23A-209ENST00000555363 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 CENPCQ03188 943 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 DBN1Q16643 649 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 OXLD1Q5BKU9 147 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 GNASQ5JWF2 1037 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 TMEM214Q6NUQ4 689 aaKnown RBP10.82□□□□□ -0.68
SEC23A-209ENST00000555363 ERICH6Q7L0X2 663 aa10.82□□□□□ -0.68
SEC23A-209ENST00000555363 GTPBP3Q969Y2 492 aaKnown RBP10.82□□□□□ -0.68
SEC23A-209ENST00000555363 PHKA2P46019 1235 aa10.81□□□□□ -0.68
SEC23A-209ENST00000555363 WDR44Q5JSH3 913 aa10.81□□□□□ -0.68
SEC23A-209ENST00000555363 SIRT1Q96EB6 747 aa10.81□□□□□ -0.68
SEC23A-209ENST00000555363 MBIPQ9NS73 344 aa10.81□□□□□ -0.68
SEC23A-209ENST00000555363 IL2RAP01589 272 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 F11P03951 625 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 IRF5Q13568 498 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 GAS6Q14393 721 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 WASHC4Q2M389 1173 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 NUCKS1Q9H1E3 243 aaKnown RBP10.8□□□□□ -0.68
SEC23A-209ENST00000555363 ENAMQ9NRM1 1142 aa10.8□□□□□ -0.68
SEC23A-209ENST00000555363 SEMA3FQ13275 785 aa10.79□□□□□ -0.68
SEC23A-209ENST00000555363 LYPD4Q6UWN0 246 aa10.79□□□□□ -0.68
SEC23A-209ENST00000555363 TMEM151AQ8N4L1 468 aa10.79□□□□□ -0.68
SEC23A-209ENST00000555363 GPAMQ9HCL2 828 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms