RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 PRR36Q9H6K5 1346 aa13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 TOPAZ1Q8N9V7 1692 aa13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 ZNF445P59923 1031 aa13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 GCC1Q96CN9 775 aa13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 API5Q9BZZ5 524 aaKnown RBP13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 TTC21BQ7Z4L5 1316 aa13.23□□□□□ -0.29
MTHFD1-210ENST00000555252 MSNP26038 577 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-210ENST00000555252 KIAA1211Q6ZU35 1233 aa13.22□□□□□ -0.29
MTHFD1-210ENST00000555252 MTERF4Q7Z6M4 381 aaKnown RBP13.22□□□□□ -0.29
MTHFD1-210ENST00000555252 MBIPQ9NS73 344 aa13.22□□□□□ -0.29
MTHFD1-210ENST00000555252 ZRANB1Q9UGI0 708 aa13.22□□□□□ -0.29
MTHFD1-210ENST00000555252 OVOS2A0A0J9YW53 1432 aa13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 OVOS2Q6IE36 1432 aa13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 ZBTB7BO15156 539 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 TWISTNBQ3B726 338 aaPredicted RBP13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 AK9Q5TCS8 1911 aa13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 ABCC4O15439 1325 aa13.21□□□□□ -0.29
MTHFD1-210ENST00000555252 RRS1Q15050 365 aaKnown RBP13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 KIF2CQ99661 725 aa13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 MCM5P33992 734 aa13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 EID1Q9Y6B2 187 aa13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 USP31Q70CQ4 1352 aa13.2□□□□□ -0.3
MTHFD1-210ENST00000555252 USP6P35125 1406 aa13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 ZNF500O60304 480 aaPredicted RBP13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 NUCB2P80303 420 aa13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 THUMPD2Q9BTF0 503 aaKnown RBP13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 ACEP12821 1306 aa13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 TTC21AQ8NDW8 1320 aa13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 NCKAP5LQ9HCH0 1330 aa13.19□□□□□ -0.3
MTHFD1-210ENST00000555252 NALCNQ8IZF0 1738 aa13.18□□□□□ -0.3
MTHFD1-210ENST00000555252 DLG5Q8TDM6 1919 aa13.18□□□□□ -0.3
MTHFD1-210ENST00000555252 EIF4A2Q14240 407 aaKnown RBP13.18□□□□□ -0.3
MTHFD1-210ENST00000555252 TSPYL6Q8N831 410 aa13.18□□□□□ -0.3
MTHFD1-210ENST00000555252 SLIT1O75093 1534 aa13.18□□□□□ -0.3
MTHFD1-210ENST00000555252 CSPP1Q1MSJ5 1256 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 PDLIM2Q96JY6 352 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 NOL7Q9UMY1 257 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 TBX22Q9Y458 520 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 KIAA0232Q92628 1395 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 DDX49Q9Y6V7 483 aaKnown RBP13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 SSH2Q76I76 1423 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
MTHFD1-210ENST00000555252 LTKP29376 864 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 DIP2AQ14689 1571 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 RABEP1Q15276 862 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 C8orf58Q8NAV2 365 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 ARHGEF10O15013 1369 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 SULT6B1Q6IMI4 303 aa13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
MTHFD1-210ENST00000555252 CHL1O00533 1208 aa13.15□□□□□ -0.3
MTHFD1-210ENST00000555252 RGPD1P0DJD0 1748 aa13.15□□□□□ -0.3
MTHFD1-210ENST00000555252 CDC45O75419 566 aa13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 LNPKQ9C0E8 428 aa13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 PTPRUQ92729 1446 aa13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 CYP2E1P05181 493 aaPredicted RBP13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 SSFA2P28290 1259 aa13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 INTS3Q68E01 1043 aaKnown RBP13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 TBC1D9Q6ZT07 1266 aa13.14□□□□□ -0.31
MTHFD1-210ENST00000555252 ANKRD45Q5TZF3 282 aa13.13□□□□□ -0.31
MTHFD1-210ENST00000555252 AMOTL2Q9Y2J4 779 aa13.13□□□□□ -0.31
MTHFD1-210ENST00000555252 PTPRCP08575 1304 aa13.13□□□□□ -0.31
MTHFD1-210ENST00000555252 FAM83GA6ND36 823 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 DYNC1I1O14576 645 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 SBNO1A3KN83 1393 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 PEAK1Q9H792 1746 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 AEBP1Q8IUX7 1158 aa13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 THEMISQ8N1K5 641 aaPredicted RBP13.12□□□□□ -0.31
MTHFD1-210ENST00000555252 RIMS1Q86UR5 1692 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 DCTN1Q14203 1278 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 ANKARQ7Z5J8 1434 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 FLT4P35916 1363 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 CEBPAP49715 358 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 PLPPR3Q6T4P5 718 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 RPAP2Q8IXW5 612 aaPredicted RBP13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
MTHFD1-210ENST00000555252 HSP90AB2PQ58FF8 381 aa13.1□□□□□ -0.31
MTHFD1-210ENST00000555252 SIRT2Q8IXJ6 389 aa13.1□□□□□ -0.31
MTHFD1-210ENST00000555252 SLC26A8Q96RN1 970 aa13.1□□□□□ -0.31
MTHFD1-210ENST00000555252 LMBRD1Q9NUN5 540 aa13.1□□□□□ -0.31
MTHFD1-210ENST00000555252 CRB1P82279 1406 aa13.1□□□□□ -0.31
MTHFD1-210ENST00000555252 HTATSF1O43719 755 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 DCTPP1Q9H773 170 aa13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 C1orf115Q9H7X2 142 aa13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 CCDC39Q9UFE4 941 aa13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 KDRP35968 1356 aa13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 FMN2Q9NZ56 1722 aa13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 SMAP1Q8IYB5 467 aaPredicted RBP13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 RTF1Q92541 710 aaKnown RBP13.09□□□□□ -0.31
MTHFD1-210ENST00000555252 MAP3K19Q56UN5 1328 aa13.08□□□□□ -0.31
MTHFD1-210ENST00000555252 ANKRD44Q8N8A2 993 aa13.08□□□□□ -0.32
MTHFD1-210ENST00000555252 NGDNQ8NEJ9 315 aaKnown RBP13.08□□□□□ -0.32
MTHFD1-210ENST00000555252 XRN1Q8IZH2 1706 aaKnown RBP13.07□□□□□ -0.32
MTHFD1-210ENST00000555252 NUTM2FA1L443 756 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms