RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 DIXDC1Q155Q3 683 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 FAM114A1Q8IWE2 563 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 ZSWIM4Q9H7M6 989 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 ENO4A6NNW6 628 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 MORC1Q86VD1 984 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 PAF1Q8N7H5 531 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 URI1O94763 535 aaPredicted RBP10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 CTNNBL1Q8WYA6 563 aaPredicted RBP10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 SH3GL3Q99963 347 aa10.56□□□□□ -0.72
GTF2A1-203ENST00000553612 RAD21O60216 631 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 SEC24BO95487 1268 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 ERCC4Q92889 916 aaPredicted RBP10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 TRIM4Q9C037 500 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 TPX2Q9ULW0 747 aaKnown RBP10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 PPP1R9BQ96SB3 815 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 AP1G2O75843 785 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 ANAPC4Q9UJX5 808 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 SETD5Q9C0A6 1442 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 ABCD1P33897 745 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 HSP90AB4PQ58FF6 505 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 ARHGAP29Q52LW3 1261 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 L3MBTL2Q969R5 705 aa10.55□□□□□ -0.72
GTF2A1-203ENST00000553612 LRRCC1Q9C099 1032 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 MBD3O95983 291 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ODF2LQ9ULJ1 636 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 PAXBP1Q9Y5B6 917 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 THOC1Q96FV9 657 aaKnown RBP10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 SMG6Q86US8 1419 aaKnown RBP10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 GOLGA6L10A0A0M3HER8 536 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 SMTNL1A8MU46 457 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ZKSCAN8Q15776 578 aaPredicted RBP10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ZNF710Q8N1W2 664 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 SLFN14P0C7P3 912 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 KLHL40Q2TBA0 621 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ATL2Q8NHH9 583 aa10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ZCRB1Q8TBF4 217 aaKnown RBP10.54□□□□□ -0.72
GTF2A1-203ENST00000553612 ZBTB10Q96DT7 871 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 SIRT1Q96EB6 747 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 TCHPQ9BT92 498 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 PPP1R1BQ9UD71 204 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 LRRC23Q53EV4 343 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 PUS7Q96PZ0 661 aaKnown RBP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 PICK1Q9NRD5 415 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 SWAP70Q9UH65 585 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 NPM1P06748 294 aaKnown RBP eCLIP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 NAA30Q147X3 362 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 MMS22LQ6ZRQ5 1243 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 IRX1P78414 480 aaPredicted RBP10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 SLC20A2Q08357 652 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 CAVIN2O95810 425 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 ERC1Q8IUD2 1116 aa10.53□□□□□ -0.72
GTF2A1-203ENST00000553612 KIF3CO14782 793 aa10.52□□□□□ -0.72
GTF2A1-203ENST00000553612 BAG4O95429 457 aaKnown RBP10.52□□□□□ -0.72
GTF2A1-203ENST00000553612 EIF2S2P20042 333 aaKnown RBP10.52□□□□□ -0.72
GTF2A1-203ENST00000553612 TNIKQ9UKE5 1360 aa10.52□□□□□ -0.72
GTF2A1-203ENST00000553612 MCM2P49736 904 aa10.52□□□□□ -0.72
GTF2A1-203ENST00000553612 APAF1O14727 1248 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 PAX7P23759 505 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 LRSAM1Q6UWE0 723 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 GET4Q7L5D6 327 aaPredicted RBP10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 NEDD9Q14511 834 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 WDR66Q8TBY9 1149 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 SMARCC1Q92922 1105 aaPredicted RBP10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 CAPN7Q9Y6W3 813 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 SOGA1O94964 1423 aa10.52□□□□□ -0.73
GTF2A1-203ENST00000553612 CASTP20810 708 aaKnown RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 INPP5BP32019 993 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 SYTL4Q96C24 671 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 CTAGE5O15320 804 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 HCLS1P14317 486 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 E2F5Q15329 346 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 CTCFLQ8NI51 663 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 C1orf115Q9H7X2 142 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 K7ELQ4 463 aaPredicted RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 KIAA0825Q8IV33 1275 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 TMCO5AQ8N6Q1 288 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA5Q8TBA6 731 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 ARMC2Q8NEN0 867 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 YIPF3Q9GZM5 350 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 CHCHD3Q9NX63 227 aaKnown RBP10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 EBAG9O00559 213 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 ECEL1O95672 775 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 CNGA1P29973 690 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 MAGEA9P43362 315 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 CCDC186Q7Z3E2 898 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 TMTC2Q8N394 836 aa10.51□□□□□ -0.73
GTF2A1-203ENST00000553612 PTGS1P23219 599 aa10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 CWC27Q6UX04 472 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 SKAP2O75563 359 aaPredicted RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 SLU7O95391 586 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 AMOTQ4VCS5 1084 aa10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 ETAA1Q9NY74 926 aa10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 CCT2P78371 535 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 KIF9Q9HAQ2 790 aa10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA6L7A0A1B0GV03 622 aa10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA6CA6NDK9 693 aa10.49□□□□□ -0.73
GTF2A1-203ENST00000553612 GOLGA6BA6NDN3 693 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms