RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 TRIM37O94972 964 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 CAMKK2Q96RR4 588 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 KNDC1Q76NI1 1749 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 IFT172Q9UG01 1749 aa8.12□□□□□ -1.11
HOXB3-213ENST00000552000 SPATA31A5Q5VU36 1347 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 SPATA31A7Q8IWB4 1347 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 PPP1R37O75864 691 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 RGL3Q3MIN7 710 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 IFFO2Q5TF58 517 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 PMFBP1Q8TBY8 1022 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 VPS9D1Q9Y2B5 631 aa8.11□□□□□ -1.11
HOXB3-213ENST00000552000 RRBP1Q9P2E9 1410 aaKnown RBP8.11□□□□□ -1.11
HOXB3-213ENST00000552000 APBA3O96018 575 aa8.1□□□□□ -1.11
HOXB3-213ENST00000552000 SAFB2Q14151 953 aaKnown RBP eCLIP8.1□□□□□ -1.11
HOXB3-213ENST00000552000 PPARGC1BQ86YN6 1023 aaKnown RBP8.1□□□□□ -1.11
HOXB3-213ENST00000552000 PPP1R1BQ9UD71 204 aaPredicted RBP8.1□□□□□ -1.11
HOXB3-213ENST00000552000 NRXN1Q9ULB1 1477 aa8.1□□□□□ -1.11
HOXB3-213ENST00000552000 THSD7AQ9UPZ6 1657 aa8.1□□□□□ -1.11
HOXB3-213ENST00000552000 YTHDC2Q9H6S0 1430 aaKnown RBP8.1□□□□□ -1.11
HOXB3-213ENST00000552000 COL14A1Q05707 1796 aaKnown RBP8.1□□□□□ -1.11
HOXB3-213ENST00000552000 ADGRB2O60241 1585 aa8.1□□□□□ -1.11
HOXB3-213ENST00000552000 FAM196AQ6ZSG2 479 aa8.09□□□□□ -1.11
HOXB3-213ENST00000552000 NBPF8Q3BBV2 869 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 NBPF14Q5TI25 921 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 ZNF454Q8N9F8 522 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 SPON1Q9HCB6 807 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 PRDM11Q9NQV5 511 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 GPHNQ9NQX3 736 aaPredicted RBP8.08□□□□□ -1.12
HOXB3-213ENST00000552000 PARD3Q8TEW0 1356 aa8.08□□□□□ -1.12
HOXB3-213ENST00000552000 NUP188Q5SRE5 1749 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 TRPM3Q9HCF6 1732 aaPredicted RBP8.07□□□□□ -1.12
HOXB3-213ENST00000552000 KCNQ2O43526 872 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 DSG2Q14126 1118 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 THSD4Q6ZMP0 1018 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 SIRT1Q96EB6 747 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 RREB1Q92766 1687 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 ANKRD30BQ9BXX2 1392 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 NINLQ9Y2I6 1382 aa8.07□□□□□ -1.12
HOXB3-213ENST00000552000 SPATA31A1Q5TZJ5 1347 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 ALS2Q96Q42 1657 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 CAMTA1Q9Y6Y1 1673 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 MRPL50Q8N5N7 158 aaKnown RBP8.06□□□□□ -1.12
HOXB3-213ENST00000552000 WNT2BQ93097 391 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 PRAM1Q96QH2 718 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 GPRASP1Q5JY77 1395 aa8.06□□□□□ -1.12
HOXB3-213ENST00000552000 CHD4Q14839 1912 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 PIK3C2GO75747 1445 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 SPATA31E1Q6ZUB1 1445 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 SENP3-EIF4A1A0A087X0R7 540 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 RGL2O15211 777 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 PDE3BQ13370 1112 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 SLC4A5Q9BY07 1137 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 BCL2L12Q9HB09 334 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 USP35Q9P2H5 1018 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 KAT6BQ8WYB5 2073 aa8.05□□□□□ -1.12
HOXB3-213ENST00000552000 ACIN1Q9UKV3 1341 aaKnown RBP8.04□□□□□ -1.12
HOXB3-213ENST00000552000 ANKARQ7Z5J8 1434 aa8.04□□□□□ -1.12
HOXB3-213ENST00000552000 PTPREP23469 700 aa8.04□□□□□ -1.12
HOXB3-213ENST00000552000 CFAP70Q5T0N1 1121 aa8.04□□□□□ -1.12
HOXB3-213ENST00000552000 ZNF784Q8NCA9 323 aaPredicted RBP8.04□□□□□ -1.12
HOXB3-213ENST00000552000 HIRIP3Q9BW71 556 aaPredicted RBP8.04□□□□□ -1.12
HOXB3-213ENST00000552000 C14orf93Q9H972 538 aaKnown RBP8.04□□□□□ -1.12
HOXB3-213ENST00000552000 POGKQ9P215 609 aa8.04□□□□□ -1.12
HOXB3-213ENST00000552000 DHX57Q6P158 1386 aaKnown RBP8.04□□□□□ -1.12
HOXB3-213ENST00000552000 KIAA0232Q92628 1395 aa8.04□□□□□ -1.12
HOXB3-213ENST00000552000 PRR36Q9H6K5 1346 aa8.03□□□□□ -1.12
HOXB3-213ENST00000552000 CRYBG1Q9Y4K1 1723 aa8.03□□□□□ -1.12
HOXB3-213ENST00000552000 NGDNQ8NEJ9 315 aaKnown RBP8.03□□□□□ -1.12
HOXB3-213ENST00000552000 ZC3H6P61129 1189 aaKnown RBP8.02□□□□□ -1.13
HOXB3-213ENST00000552000 NBPF3Q9H094 633 aa8.02□□□□□ -1.13
HOXB3-213ENST00000552000 GOLGB1Q14789 3259 aaKnown RBP8.02□□□□□ -1.13
HOXB3-213ENST00000552000 MINK1Q8N4C8 1332 aaPredicted RBP8.02□□□□□ -1.13
HOXB3-213ENST00000552000 EVA1CP58658 441 aa8.01□□□□□ -1.13
HOXB3-213ENST00000552000 NUTM2GQ5VZR2 741 aa8.01□□□□□ -1.13
HOXB3-213ENST00000552000 BARGINQ6ZT62 677 aa8.01□□□□□ -1.13
HOXB3-213ENST00000552000 ANO8Q9HCE9 1232 aaPredicted RBP8.01□□□□□ -1.13
HOXB3-213ENST00000552000 NRKQ7Z2Y5 1582 aa8.01□□□□□ -1.13
HOXB3-213ENST00000552000 BHMG1C9JSJ3 638 aaPredicted RBP8□□□□□ -1.13
HOXB3-213ENST00000552000 ZBTB7AO95365 584 aa8□□□□□ -1.13
HOXB3-213ENST00000552000 LARP1Q6PKG0 1096 aaKnown RBP8□□□□□ -1.13
HOXB3-213ENST00000552000 TCP11L2Q8N4U5 519 aa8□□□□□ -1.13
HOXB3-213ENST00000552000 OXER1Q8TDS5 423 aa8□□□□□ -1.13
HOXB3-213ENST00000552000 PDGFDQ9GZP0 370 aaPredicted RBP8□□□□□ -1.13
HOXB3-213ENST00000552000 SSH2Q76I76 1423 aa8□□□□□ -1.13
HOXB3-213ENST00000552000 EIF3AQ14152 1382 aaKnown RBP7.99□□□□□ -1.13
HOXB3-213ENST00000552000 DLC1Q96QB1 1528 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 SBF2Q86WG5 1849 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 WASLO00401 505 aaPredicted RBP7.99□□□□□ -1.13
HOXB3-213ENST00000552000 C1QTNF8P60827 252 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 Q6ZNB5 142 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 ZBED2Q9BTP6 218 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 TRAK1Q9UPV9 953 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 CASZ1Q86V15 1759 aa7.99□□□□□ -1.13
HOXB3-213ENST00000552000 PHRF1Q9P1Y6 1649 aaKnown RBP7.99□□□□□ -1.13
HOXB3-213ENST00000552000 MYOM1P52179 1685 aa7.98□□□□□ -1.13
HOXB3-213ENST00000552000 TULP4Q9NRJ4 1543 aa7.98□□□□□ -1.13
HOXB3-213ENST00000552000 FOSBP53539 338 aa7.98□□□□□ -1.13
HOXB3-213ENST00000552000 MPHOSPH9Q99550 1183 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms