RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 WWC3Q9ULE0 1092 aa14.22□□□□□ -0.13
R3HDM2-210ENST00000547019 CAPN15O75808 1086 aa14.21□□□□□ -0.13
R3HDM2-210ENST00000547019 KCNH5Q8NCM2 988 aa14.21□□□□□ -0.13
R3HDM2-210ENST00000547019 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
R3HDM2-210ENST00000547019 NLRP2Q9NX02 1062 aa14.2□□□□□ -0.14
R3HDM2-210ENST00000547019 UBR3Q6ZT12 1888 aa14.2□□□□□ -0.14
R3HDM2-210ENST00000547019 APLP1P51693 650 aa14.19□□□□□ -0.14
R3HDM2-210ENST00000547019 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
R3HDM2-210ENST00000547019 N4BP2Q86UW6 1770 aaPredicted RBP14.17□□□□□ -0.14
R3HDM2-210ENST00000547019 HTRA3P83110 453 aa14.17□□□□□ -0.14
R3HDM2-210ENST00000547019 KIF13BQ9NQT8 1826 aa14.17□□□□□ -0.14
R3HDM2-210ENST00000547019 IGSF1Q8N6C5 1336 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 TTC21AQ8NDW8 1320 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 C4BP0C0L5 1744 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 MSH5O43196 834 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 PRIM1P49642 420 aaKnown RBP14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 AMIGO3Q86WK7 504 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 CD2APQ9Y5K6 639 aa14.16□□□□□ -0.14
R3HDM2-210ENST00000547019 CD163L1Q9NR16 1453 aa14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 DDX54Q8TDD1 881 aaKnown RBP14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 ANKRD24Q8TF21 1146 aa14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 SYTL4Q96C24 671 aaPredicted RBP14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 CCNL1Q9UK58 526 aaPredicted RBP14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 MEGF6O75095 1541 aa14.15□□□□□ -0.14
R3HDM2-210ENST00000547019 BRCA1P38398 1863 aaKnown RBP14.14□□□□□ -0.15
R3HDM2-210ENST00000547019 PKD1L3Q7Z443 1732 aa14.13□□□□□ -0.15
R3HDM2-210ENST00000547019 USP31Q70CQ4 1352 aa14.13□□□□□ -0.15
R3HDM2-210ENST00000547019 KTN1Q86UP2 1357 aaKnown RBP14.13□□□□□ -0.15
R3HDM2-210ENST00000547019 ITGB4P16144 1822 aa14.13□□□□□ -0.15
R3HDM2-210ENST00000547019 SMIM5Q71RC9 77 aa14.12□□□□□ -0.15
R3HDM2-210ENST00000547019 SBNO2Q9Y2G9 1366 aa14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 MAP2P11137 1827 aaKnown RBP14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 PRELPP51888 382 aa14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 NME9Q86XW9 330 aa14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 JMYQ8N9B5 988 aa14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 NMRK2Q9NPI5 230 aa14.11□□□□□ -0.15
R3HDM2-210ENST00000547019 TOMM70O94826 608 aa14.1□□□□□ -0.15
R3HDM2-210ENST00000547019 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.1□□□□□ -0.15
R3HDM2-210ENST00000547019 EVC2Q86UK5 1308 aa14.1□□□□□ -0.15
R3HDM2-210ENST00000547019 TNS4Q8IZW8 715 aa14.09□□□□□ -0.15
R3HDM2-210ENST00000547019 KLRG1Q96E93 195 aa14.09□□□□□ -0.15
R3HDM2-210ENST00000547019 ZNF692Q9BU19 519 aaPredicted RBP14.09□□□□□ -0.15
R3HDM2-210ENST00000547019 PXDNLA1KZ92 1463 aa14.09□□□□□ -0.15
R3HDM2-210ENST00000547019 USP47Q96K76 1375 aa14.08□□□□□ -0.16
R3HDM2-210ENST00000547019 SIN3AQ96ST3 1273 aa14.07□□□□□ -0.16
R3HDM2-210ENST00000547019 ARFGEF1Q9Y6D6 1849 aa14.06□□□□□ -0.16
R3HDM2-210ENST00000547019 NEUROD1Q13562 356 aa14.06□□□□□ -0.16
R3HDM2-210ENST00000547019 TNRC6CQ9HCJ0 1690 aaKnown RBP14.05□□□□□ -0.16
R3HDM2-210ENST00000547019 LTV1Q96GA3 475 aaPredicted RBP14.05□□□□□ -0.16
R3HDM2-210ENST00000547019 TONSLQ96HA7 1378 aa14.05□□□□□ -0.16
R3HDM2-210ENST00000547019 SBF1O95248 1867 aa14.04□□□□□ -0.16
R3HDM2-210ENST00000547019 PALLDQ8WX93 1383 aa14.04□□□□□ -0.16
R3HDM2-210ENST00000547019 KCPQ6ZWJ8 1503 aa14.04□□□□□ -0.16
R3HDM2-210ENST00000547019 PHF14O94880 888 aa14.03□□□□□ -0.16
R3HDM2-210ENST00000547019 ZCRB1Q8TBF4 217 aaKnown RBP14.02□□□□□ -0.17
R3HDM2-210ENST00000547019 RBM46Q8TBY0 533 aaKnown RBP14.02□□□□□ -0.17
R3HDM2-210ENST00000547019 IP6K1Q92551 441 aa14.02□□□□□ -0.17
R3HDM2-210ENST00000547019 EDC4Q6P2E9 1401 aaKnown RBP14.01□□□□□ -0.17
R3HDM2-210ENST00000547019 SLC34A2O95436 690 aa14.01□□□□□ -0.17
R3HDM2-210ENST00000547019 FBLN1P23142 703 aa14.01□□□□□ -0.17
R3HDM2-210ENST00000547019 C10orf71Q711Q0 1435 aa14□□□□□ -0.17
R3HDM2-210ENST00000547019 CLSPNQ9HAW4 1339 aa14□□□□□ -0.17
R3HDM2-210ENST00000547019 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14□□□□□ -0.17
R3HDM2-210ENST00000547019 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
R3HDM2-210ENST00000547019 L3MBTL2Q969R5 705 aa14□□□□□ -0.17
R3HDM2-210ENST00000547019 A0A1W2PP64 1363 aa13.99□□□□□ -0.17
R3HDM2-210ENST00000547019 C4AP0C0L4 1744 aa13.99□□□□□ -0.17
R3HDM2-210ENST00000547019 MAP3K19Q56UN5 1328 aa13.99□□□□□ -0.17
R3HDM2-210ENST00000547019 CCER1Q8TC90 406 aaPredicted RBP13.99□□□□□ -0.17
R3HDM2-210ENST00000547019 HOXC9P31274 260 aa13.98□□□□□ -0.17
R3HDM2-210ENST00000547019 USHBP1Q8N6Y0 703 aa13.98□□□□□ -0.17
R3HDM2-210ENST00000547019 BCS1LQ9Y276 419 aa13.98□□□□□ -0.17
R3HDM2-210ENST00000547019 HSPA1AP0DMV8 641 aaKnown RBP13.97□□□□□ -0.17
R3HDM2-210ENST00000547019 HSPA1BP0DMV9 641 aaKnown RBP13.97□□□□□ -0.17
R3HDM2-210ENST00000547019 LINC00116Q8NCU8 138 aa13.97□□□□□ -0.17
R3HDM2-210ENST00000547019 AK7Q96M32 723 aa13.97□□□□□ -0.17
R3HDM2-210ENST00000547019 A0A0G2JLW4 131 aa13.96□□□□□ -0.17
R3HDM2-210ENST00000547019 NBPF6Q5VWK0 638 aa13.96□□□□□ -0.17
R3HDM2-210ENST00000547019 NBPF4Q96M43 638 aa13.96□□□□□ -0.17
R3HDM2-210ENST00000547019 COL5A3P25940 1745 aaPredicted RBP13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 MMP10P09238 476 aa13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 FSTL1Q12841 308 aa13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 C9orf131Q5VYM1 1079 aa13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 SLC12A5Q9H2X9 1139 aa13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
R3HDM2-210ENST00000547019 SSFA2P28290 1259 aa13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 MPRIPQ6WCQ1 1025 aa13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 ARHGAP27Q6ZUM4 889 aa13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 TIAM2Q8IVF5 1701 aa13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 ROCK2O75116 1388 aaKnown RBP13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 PLEKHG2Q9H7P9 1386 aa13.94□□□□□ -0.18
R3HDM2-210ENST00000547019 CYP27B1O15528 508 aa13.93□□□□□ -0.18
R3HDM2-210ENST00000547019 CCDC88AQ3V6T2 1871 aa13.93□□□□□ -0.18
R3HDM2-210ENST00000547019 DPEP1P16444 411 aa13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 KCNA3P22001 575 aa13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 ITPK1Q13572 414 aa13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 C16orf71Q8IYS4 520 aaPredicted RBP13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 RRAGCQ9HB90 399 aa13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 MYH14Q7Z406 1995 aaKnown RBP13.92□□□□□ -0.18
R3HDM2-210ENST00000547019 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms