RNA–Protein interactions for RNA: ENST00000543955.5

PGAM5-204, Transcript of PGAM family member 5, mitochondrial serine/threonine protein phosphatase, humanhuman

TSL 2 BASIC

Gene PGAM5, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM5-204ENST00000543955 WNK3Q9BYP7 1800 aa27.6■■■□□ 2.01
PGAM5-204ENST00000543955 E9PSI1 815 aa27.59■■■□□ 2.01
PGAM5-204ENST00000543955 PLEKHO1Q53GL0 409 aaPredicted RBP27.59■■■□□ 2.01
PGAM5-204ENST00000543955 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.59■■■□□ 2.01
PGAM5-204ENST00000543955 TATP17735 454 aaPredicted RBP27.58■■■□□ 2.01
PGAM5-204ENST00000543955 CALD1Q05682 793 aaKnown RBP27.58■■■□□ 2.01
PGAM5-204ENST00000543955 CDCA7LQ96GN5 454 aa27.58■■■□□ 2
PGAM5-204ENST00000543955 IL16Q14005 1332 aa27.57■■■□□ 2
PGAM5-204ENST00000543955 MAP3K5Q99683 1374 aa27.57■■■□□ 2
PGAM5-204ENST00000543955 VIRMAQ69YN4 1812 aaKnown RBP27.57■■■□□ 2
PGAM5-204ENST00000543955 OVOS2A0A0G2JMS6 1433 aa27.57■■■□□ 2
PGAM5-204ENST00000543955 LRRC37A3O60309 1634 aa27.56■■■□□ 2
PGAM5-204ENST00000543955 SLFN5Q08AF3 891 aa27.55■■■□□ 2
PGAM5-204ENST00000543955 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.55■■■□□ 2
PGAM5-204ENST00000543955 HTATSF1O43719 755 aaKnown RBP27.55■■■□□ 2
PGAM5-204ENST00000543955 RTF1Q92541 710 aaKnown RBP27.54■■■□□ 2
PGAM5-204ENST00000543955 C8orf37Q96NL8 207 aa27.54■■■□□ 2
PGAM5-204ENST00000543955 GNAT3A8MTJ3 354 aa27.53■■■□□ 2
PGAM5-204ENST00000543955 ZNF530Q6P9A1 599 aaPredicted RBP27.52■■■□□ 2
PGAM5-204ENST00000543955 NGLY1Q96IV0 654 aa27.52■■■□□ 2
PGAM5-204ENST00000543955 MYH16Q9H6N6 1097 aa27.52■■■□□ 2
PGAM5-204ENST00000543955 SPG7Q9UQ90 795 aa27.52■■■□□ 2
PGAM5-204ENST00000543955 IL2RBP14784 551 aa27.51■■□□□ 1.99
PGAM5-204ENST00000543955 TRMT2AQ8IZ69 625 aaKnown RBP27.51■■□□□ 1.99
PGAM5-204ENST00000543955 AKAP4Q5JQC9 854 aa27.5■■□□□ 1.99
PGAM5-204ENST00000543955 MEX3CQ5U5Q3 659 aaKnown RBP27.5■■□□□ 1.99
PGAM5-204ENST00000543955 DUSP27Q5VZP5 1158 aa27.5■■□□□ 1.99
PGAM5-204ENST00000543955 C1orf141Q5JVX7 400 aa27.5■■□□□ 1.99
PGAM5-204ENST00000543955 SPINK5Q9NQ38 1064 aaPredicted RBP27.5■■□□□ 1.99
PGAM5-204ENST00000543955 SHANK3Q9BYB0 1731 aa27.49■■□□□ 1.99
PGAM5-204ENST00000543955 UNC5CLQ8IV45 518 aa27.49■■□□□ 1.99
PGAM5-204ENST00000543955 FNBP4Q8N3X1 1017 aaPredicted RBP27.49■■□□□ 1.99
PGAM5-204ENST00000543955 ADAMTS7Q9UKP4 1686 aa27.49■■□□□ 1.99
PGAM5-204ENST00000543955 BCL9LQ86UU0 1499 aa27.48■■□□□ 1.99
PGAM5-204ENST00000543955 DISP2A7MBM2 1401 aa27.48■■□□□ 1.99
PGAM5-204ENST00000543955 USP35Q9P2H5 1018 aa27.48■■□□□ 1.99
PGAM5-204ENST00000543955 THUMPD2Q9BTF0 503 aaKnown RBP27.47■■□□□ 1.99
PGAM5-204ENST00000543955 THRAP3Q9Y2W1 955 aaKnown RBP27.47■■□□□ 1.99
PGAM5-204ENST00000543955 SPATA31A1Q5TZJ5 1347 aa27.46■■□□□ 1.99
PGAM5-204ENST00000543955 DCTN1Q14203 1278 aa27.46■■□□□ 1.99
PGAM5-204ENST00000543955 MCM10Q7L590 875 aa27.46■■□□□ 1.99
PGAM5-204ENST00000543955 IFT57Q9NWB7 429 aa27.46■■□□□ 1.99
PGAM5-204ENST00000543955 SCN11AQ9UI33 1791 aa27.46■■□□□ 1.99
PGAM5-204ENST00000543955 FBXO41Q8TF61 875 aa27.45■■□□□ 1.99
PGAM5-204ENST00000543955 GNAI1P63096 354 aa27.45■■□□□ 1.98
PGAM5-204ENST00000543955 SPATA31A5Q5VU36 1347 aa27.44■■□□□ 1.98
PGAM5-204ENST00000543955 SPATA31A7Q8IWB4 1347 aa27.44■■□□□ 1.98
PGAM5-204ENST00000543955 PCDH11XQ9BZA7 1347 aa27.44■■□□□ 1.98
PGAM5-204ENST00000543955 PCDH11YQ9BZA8 1340 aa27.44■■□□□ 1.98
PGAM5-204ENST00000543955 CDCA7Q9BWT1 371 aaPredicted RBP27.43■■□□□ 1.98
PGAM5-204ENST00000543955 CEMIPQ8WUJ3 1361 aa27.43■■□□□ 1.98
PGAM5-204ENST00000543955 FANCIQ9NVI1 1328 aa27.43■■□□□ 1.98
PGAM5-204ENST00000543955 IFNL2Q8IZJ0 200 aa27.43■■□□□ 1.98
PGAM5-204ENST00000543955 CFAP44Q96MT7 982 aa27.43■■□□□ 1.98
PGAM5-204ENST00000543955 VPS72Q15906 364 aa27.42■■□□□ 1.98
PGAM5-204ENST00000543955 ZCRB1Q8TBF4 217 aaKnown RBP27.42■■□□□ 1.98
PGAM5-204ENST00000543955 USP21Q9UK80 565 aa27.41■■□□□ 1.98
PGAM5-204ENST00000543955 ZNF853P0CG23 659 aa27.4■■□□□ 1.98
PGAM5-204ENST00000543955 PHKG2P15735 406 aa27.4■■□□□ 1.98
PGAM5-204ENST00000543955 SIPA1L3O60292 1781 aaPredicted RBP27.4■■□□□ 1.98
PGAM5-204ENST00000543955 CCDC9Q9Y3X0 531 aaKnown RBP27.4■■□□□ 1.98
PGAM5-204ENST00000543955 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.98
PGAM5-204ENST00000543955 IL17REQ8NFR9 667 aa27.39■■□□□ 1.98
PGAM5-204ENST00000543955 LAS1LQ9Y4W2 734 aaKnown RBP27.39■■□□□ 1.98
PGAM5-204ENST00000543955 TNS2Q63HR2 1409 aa27.38■■□□□ 1.97
PGAM5-204ENST00000543955 BARGINQ6ZT62 677 aa27.37■■□□□ 1.97
PGAM5-204ENST00000543955 TSR2Q969E8 191 aaKnown RBP27.37■■□□□ 1.97
PGAM5-204ENST00000543955 AFF2P51816 1311 aa27.37■■□□□ 1.97
PGAM5-204ENST00000543955 CYP27B1O15528 508 aa27.37■■□□□ 1.97
PGAM5-204ENST00000543955 MPRIPQ6WCQ1 1025 aa27.36■■□□□ 1.97
PGAM5-204ENST00000543955 KDM6AO15550 1401 aaPredicted RBP27.35■■□□□ 1.97
PGAM5-204ENST00000543955 RNMTO43148 476 aaKnown RBP27.35■■□□□ 1.97
PGAM5-204ENST00000543955 MRC1P22897 1456 aa27.35■■□□□ 1.97
PGAM5-204ENST00000543955 KDM3BQ7LBC6 1761 aa27.35■■□□□ 1.97
PGAM5-204ENST00000543955 MBIPQ9NS73 344 aa27.35■■□□□ 1.97
PGAM5-204ENST00000543955 BABAM1Q9NWV8 329 aa27.35■■□□□ 1.97
PGAM5-204ENST00000543955 RCAN3Q9UKA8 241 aa27.35■■□□□ 1.97
PGAM5-204ENST00000543955 CHL1O00533 1208 aa27.34■■□□□ 1.97
PGAM5-204ENST00000543955 DCAF5Q96JK2 942 aa27.34■■□□□ 1.97
PGAM5-204ENST00000543955 CT47B1P0C2W7 299 aaPredicted RBP27.33■■□□□ 1.97
PGAM5-204ENST00000543955 TEFQ10587 303 aa27.33■■□□□ 1.97
PGAM5-204ENST00000543955 LGR6Q9HBX8 967 aa27.32■■□□□ 1.96
PGAM5-204ENST00000543955 ATRNO75882 1429 aa27.31■■□□□ 1.96
PGAM5-204ENST00000543955 TAF7Q15545 349 aaPredicted RBP27.31■■□□□ 1.96
PGAM5-204ENST00000543955 TSPYL4Q9UJ04 414 aa27.3■■□□□ 1.96
PGAM5-204ENST00000543955 GLI3P10071 1580 aa27.3■■□□□ 1.96
PGAM5-204ENST00000543955 EXOC5O00471 708 aa27.3■■□□□ 1.96
PGAM5-204ENST00000543955 EXOSC9Q06265 439 aaKnown RBP27.3■■□□□ 1.96
PGAM5-204ENST00000543955 THSD7AQ9UPZ6 1657 aa27.29■■□□□ 1.96
PGAM5-204ENST00000543955 NKX1-1Q15270 411 aaPredicted RBP27.29■■□□□ 1.96
PGAM5-204ENST00000543955 TRPC5Q9UL62 973 aaPredicted RBP27.29■■□□□ 1.96
PGAM5-204ENST00000543955 DDX54Q8TDD1 881 aaKnown RBP27.28■■□□□ 1.96
PGAM5-204ENST00000543955 TOGARAM1Q9Y4F4 1720 aa27.28■■□□□ 1.96
PGAM5-204ENST00000543955 DDB1Q16531 1140 aa27.27■■□□□ 1.96
PGAM5-204ENST00000543955 SUPT16HQ9Y5B9 1047 aaKnown RBP27.27■■□□□ 1.96
PGAM5-204ENST00000543955 SLC52A2Q9HAB3 445 aa27.25■■□□□ 1.95
PGAM5-204ENST00000543955 FAM98CQ17RN3 349 aaKnown RBP27.25■■□□□ 1.95
PGAM5-204ENST00000543955 GJD4Q96KN9 370 aaPredicted RBP27.25■■□□□ 1.95
PGAM5-204ENST00000543955 ZNF428Q96B54 188 aa27.23■■□□□ 1.95
PGAM5-204ENST00000543955 BTBD11A6QL63 1104 aa27.22■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms