RNA–Protein interactions for RNA: ENST00000542354.1

TRAV1-1-201, Transcript of T cell receptor alpha variable 1-1, humanhuman

APPRIS P1 BASIC

Gene TRAV1-1, Length 392 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1-201ENST00000542354 ADGBQ8N7X0 1667 aa3.96□□□□□ -1.78
TRAV1-1-201ENST00000542354 DLC1Q96QB1 1528 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 KIAA1210Q9ULL0 1709 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 ZC3H13Q5T200 1668 aaKnown RBP3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 TIAM1Q13009 1591 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 CAMSAP2Q08AD1 1489 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 FAM187AA6NFU0 413 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 RNF223E7ERA6 249 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 CD2BP2O95400 341 aaKnown RBP3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 APBA3O96018 575 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 CFHP08603 1231 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 MYT1Q01538 1121 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 PRPF38BQ5VTL8 546 aaKnown RBP3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 SMYD5Q6GMV2 418 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 BLOC1S3Q6QNY0 202 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 EYA1Q99502 592 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 TMEM134Q9H6X4 195 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 CDHR5Q9HBB8 845 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 FAM198AQ9UFP1 575 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 ABCA6Q8N139 1617 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 BIVM-ERCC5R4GMW8 1640 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 KIF27Q86VH2 1401 aa3.95□□□□□ -1.78
TRAV1-1-201ENST00000542354 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 FCHSD2O94868 740 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 ZBTB7AO95365 584 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 RPIAP49247 311 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 CTC1Q2NKJ3 1217 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 GRIPAP1Q4V328 841 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 PAXIP1Q6ZW49 1069 aaPredicted RBP3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 SLC17A8Q8NDX2 589 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 NKX2-3Q8TAU0 364 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 GCC1Q96CN9 775 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 NCOA3Q9Y6Q9 1424 aa3.94□□□□□ -1.78
TRAV1-1-201ENST00000542354 BRWD3Q6RI45 1802 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 FAM181BA6NEQ2 426 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 ZBTB24O43167 697 aaPredicted RBP3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 SULF1Q8IWU6 871 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 ZNF775Q96BV0 537 aaPredicted RBP3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 ARXQ96QS3 562 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 SLC26A8Q96RN1 970 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 CCDC9Q9Y3X0 531 aaKnown RBP3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 NRKQ7Z2Y5 1582 aa3.93□□□□□ -1.78
TRAV1-1-201ENST00000542354 NKTRP30414 1462 aaKnown RBP3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 NUTM2FA1L443 756 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 TRIM37O94972 964 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 INSM1Q01101 510 aaPredicted RBP3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 PTGDRQ13258 359 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 CYP4X1Q8N118 509 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 RGPD1P0DJD0 1748 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 MROH1Q8NDA8 1641 aa3.92□□□□□ -1.78
TRAV1-1-201ENST00000542354 A0A0C4DFX4 3053 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 MAP3K5Q99683 1374 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 KDM5AP29375 1690 aaKnown RBP3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 RCCD1A6NED2 376 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 S1PR4O95977 384 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 CTCFP49711 727 aaPredicted RBP3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 FSTL1Q12841 308 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 VPS72Q15906 364 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 CRIPAKQ8N1N5 446 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 WDR90Q96KV7 1748 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 SPSB2Q99619 263 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 NPDC1Q9NQX5 325 aaPredicted RBP3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 ADGRG1Q9Y653 693 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 ARHGAP35Q9NRY4 1499 aa3.91□□□□□ -1.78
TRAV1-1-201ENST00000542354 GOLGB1Q14789 3259 aaKnown RBP3.9□□□□□ -1.78
TRAV1-1-201ENST00000542354 LCE2BO14633 110 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 FMNL1O95466 1100 aaPredicted RBP3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 HIC1Q14526 733 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 FAM182BQ5T319 152 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 TREML4Q6UXN2 200 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 FAM196AQ6ZSG2 479 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 C16orf71Q8IYS4 520 aaPredicted RBP3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 DDX17Q92841 729 aaKnown RBP3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 BCANQ96GW7 911 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 REPIN1Q9BWE0 567 aaKnown RBP3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 MTFR1LQ9H019 292 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 SENP2Q9HC62 589 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 STK17AQ9UEE5 414 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 PZPP20742 1482 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 WASHC2CQ9Y4E1 1318 aa3.9□□□□□ -1.79
TRAV1-1-201ENST00000542354 GLI3P10071 1580 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 TNRC18O15417 2968 aaPredicted RBP3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 TNFRSF10AO00220 468 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 AXIN1O15169 862 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 FOXN1O15353 648 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 PRIM1P49642 420 aaKnown RBP3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 Q3C1V9 767 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 RDH13Q8NBN7 331 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 KIFC2Q96AC6 838 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 AIDAQ96BJ3 306 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 SALL2Q9Y467 1007 aaPredicted RBP3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 NCOA2Q15596 1464 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 MYOM1P52179 1685 aa3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 SPAG9O60271 1321 aaKnown RBP3.89□□□□□ -1.79
TRAV1-1-201ENST00000542354 FMN1Q68DA7 1419 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 TTC24A2A3L6 582 aaPredicted RBP3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 C3orf80F5H4A9 247 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 TLL1O43897 1013 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 GDF9O60383 454 aa3.88□□□□□ -1.79
TRAV1-1-201ENST00000542354 FOXC1Q12948 553 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms