RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DNAJC2Q99543 621 aaKnown RBP16.02■□□□□ 0.16
DDX55-206ENST00000539934 KIF1AQ12756 1690 aa16.02■□□□□ 0.16
DDX55-206ENST00000539934 ABCA3Q99758 1704 aa16.02■□□□□ 0.15
DDX55-206ENST00000539934 YY1P25490 414 aa16.01■□□□□ 0.15
DDX55-206ENST00000539934 NWD2Q9ULI1 1742 aa16.01■□□□□ 0.15
DDX55-206ENST00000539934 CHRNA2Q15822 529 aa16■□□□□ 0.15
DDX55-206ENST00000539934 TAF3Q5VWG9 929 aa16■□□□□ 0.15
DDX55-206ENST00000539934 PNISRQ8TF01 805 aaKnown RBP16■□□□□ 0.15
DDX55-206ENST00000539934 STRN4Q9NRL3 753 aa16■□□□□ 0.15
DDX55-206ENST00000539934 APPP05067 770 aa15.99■□□□□ 0.15
DDX55-206ENST00000539934 ZBED9Q6R2W3 1325 aa15.99■□□□□ 0.15
DDX55-206ENST00000539934 ARHGEF10O15013 1369 aa15.99■□□□□ 0.15
DDX55-206ENST00000539934 SBNO1A3KN83 1393 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 APBA3O96018 575 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 MYCNP04198 464 aaPredicted RBP15.98■□□□□ 0.15
DDX55-206ENST00000539934 NUTM2GQ5VZR2 741 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 POGKQ9P215 609 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 SPATA31A5Q5VU36 1347 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 SPATA31A7Q8IWB4 1347 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 DMTNQ08495 405 aa15.98■□□□□ 0.15
DDX55-206ENST00000539934 NRAPQ86VF7 1730 aa15.97■□□□□ 0.15
DDX55-206ENST00000539934 TRIM44Q96DX7 344 aaPredicted RBP15.97■□□□□ 0.15
DDX55-206ENST00000539934 PRDM11Q9NQV5 511 aa15.97■□□□□ 0.15
DDX55-206ENST00000539934 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
DDX55-206ENST00000539934 KIF20AO95235 890 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 CEP120Q8N960 986 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 CAMKK2Q96RR4 588 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 EVC2Q86UK5 1308 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 KNDC1Q76NI1 1749 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 SLC20A2Q08357 652 aa15.96■□□□□ 0.15
DDX55-206ENST00000539934 ZC3H6P61129 1189 aaKnown RBP15.95■□□□□ 0.14
DDX55-206ENST00000539934 TULP4Q9NRJ4 1543 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 RGPD1P0DJD0 1748 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 MAFGO15525 162 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 ANAPC15P60006 121 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 PRR36Q9H6K5 1346 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 ZHX1Q9UKY1 873 aaPredicted RBP15.94■□□□□ 0.14
DDX55-206ENST00000539934 NPC1L1Q9UHC9 1359 aa15.94■□□□□ 0.14
DDX55-206ENST00000539934 TNS1Q9HBL0 1735 aaKnown RBP15.93■□□□□ 0.14
DDX55-206ENST00000539934 OS9Q13438 667 aaPredicted RBP15.93■□□□□ 0.14
DDX55-206ENST00000539934 CEP350Q5VT06 3117 aa15.93■□□□□ 0.14
DDX55-206ENST00000539934 NGDNQ8NEJ9 315 aaKnown RBP15.92■□□□□ 0.14
DDX55-206ENST00000539934 KIAA0232Q92628 1395 aa15.92■□□□□ 0.14
DDX55-206ENST00000539934 GPATCH11Q8N954 259 aa15.92■□□□□ 0.14
DDX55-206ENST00000539934 PPP1R1BQ9UD71 204 aaPredicted RBP15.91■□□□□ 0.14
DDX55-206ENST00000539934 SPATA31A1Q5TZJ5 1347 aa15.91■□□□□ 0.14
DDX55-206ENST00000539934 TNNT2P45379 298 aaPredicted RBP15.91■□□□□ 0.14
DDX55-206ENST00000539934 NBPF20Q3BBV1 942 aa15.91■□□□□ 0.14
DDX55-206ENST00000539934 CARD10Q9BWT7 1032 aa15.91■□□□□ 0.14
DDX55-206ENST00000539934 CARD14Q9BXL6 1004 aa15.91■□□□□ 0.14
DDX55-206ENST00000539934 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
DDX55-206ENST00000539934 PPP2R1AP30153 589 aa15.9■□□□□ 0.14
DDX55-206ENST00000539934 FAM196AQ6ZSG2 479 aa15.9■□□□□ 0.14
DDX55-206ENST00000539934 COL14A1Q05707 1796 aaKnown RBP15.9■□□□□ 0.14
DDX55-206ENST00000539934 SIRT1Q96EB6 747 aa15.9■□□□□ 0.14
DDX55-206ENST00000539934 TRPM3Q9HCF6 1732 aaPredicted RBP15.9■□□□□ 0.14
DDX55-206ENST00000539934 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
DDX55-206ENST00000539934 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
DDX55-206ENST00000539934 CABP2Q9NPB3 220 aa15.89■□□□□ 0.13
DDX55-206ENST00000539934 NSD3Q9BZ95 1437 aa15.89■□□□□ 0.13
DDX55-206ENST00000539934 THSD7AQ9UPZ6 1657 aa15.89■□□□□ 0.13
DDX55-206ENST00000539934 PDE3BQ13370 1112 aa15.88■□□□□ 0.13
DDX55-206ENST00000539934 YY1AP1Q9H869 796 aa15.88■□□□□ 0.13
DDX55-206ENST00000539934 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
DDX55-206ENST00000539934 DISP2A7MBM2 1401 aa15.88■□□□□ 0.13
DDX55-206ENST00000539934 ALS2Q96Q42 1657 aa15.88■□□□□ 0.13
DDX55-206ENST00000539934 EVA1CP58658 441 aa15.87■□□□□ 0.13
DDX55-206ENST00000539934 SENP3-EIF4A1A0A087X0R7 540 aa15.87■□□□□ 0.13
DDX55-206ENST00000539934 EGFL6Q8IUX8 553 aa15.87■□□□□ 0.13
DDX55-206ENST00000539934 PDGFDQ9GZP0 370 aaPredicted RBP15.87■□□□□ 0.13
DDX55-206ENST00000539934 SOX12O15370 315 aa15.86■□□□□ 0.13
DDX55-206ENST00000539934 LARP1Q6PKG0 1096 aaKnown RBP15.86■□□□□ 0.13
DDX55-206ENST00000539934 ZNF692Q9BU19 519 aaPredicted RBP15.86■□□□□ 0.13
DDX55-206ENST00000539934 ANKRD36BQ8N2N9 1353 aa15.85■□□□□ 0.13
DDX55-206ENST00000539934 DNTTIP2Q5QJE6 756 aaKnown RBP15.85■□□□□ 0.13
DDX55-206ENST00000539934 CWC22Q9HCG8 908 aaKnown RBP15.85■□□□□ 0.13
DDX55-206ENST00000539934 NINLQ9Y2I6 1382 aa15.85■□□□□ 0.13
DDX55-206ENST00000539934 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
DDX55-206ENST00000539934 MAPK8IP2Q13387 824 aaPredicted RBP15.84■□□□□ 0.13
DDX55-206ENST00000539934 NBPF14Q5TI25 921 aa15.84■□□□□ 0.13
DDX55-206ENST00000539934 ANKARQ7Z5J8 1434 aa15.84■□□□□ 0.13
DDX55-206ENST00000539934 ZBTB7CA1YPR0 619 aa15.84■□□□□ 0.13
DDX55-206ENST00000539934 SPON1Q9HCB6 807 aa15.84■□□□□ 0.13
DDX55-206ENST00000539934 CAMTA1Q9Y6Y1 1673 aa15.84■□□□□ 0.13
DDX55-206ENST00000539934 PTF1AQ7RTS3 328 aa15.83■□□□□ 0.13
DDX55-206ENST00000539934 GEMIN8Q9NWZ8 242 aaKnown RBP15.83■□□□□ 0.13
DDX55-206ENST00000539934 ADGRB2O60241 1585 aa15.83■□□□□ 0.12
DDX55-206ENST00000539934 WDR43Q15061 677 aaKnown RBP eCLIP15.83■□□□□ 0.12
DDX55-206ENST00000539934 INSRP06213 1382 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 MTERF4Q7Z6M4 381 aaKnown RBP15.82■□□□□ 0.12
DDX55-206ENST00000539934 ZNF526Q8TF50 670 aaPredicted RBP15.82■□□□□ 0.12
DDX55-206ENST00000539934 CGNL1Q0VF96 1302 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 CRYBG1Q9Y4K1 1723 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 KCNQ2O43526 872 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 LETM1O95202 739 aaPredicted RBP15.82■□□□□ 0.12
DDX55-206ENST00000539934 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 NUP188Q5SRE5 1749 aa15.82■□□□□ 0.12
DDX55-206ENST00000539934 CDK19Q9BWU1 502 aa15.81■□□□□ 0.12
DDX55-206ENST00000539934 GTPBP4Q9BZE4 634 aaKnown RBP15.81■□□□□ 0.12
DDX55-206ENST00000539934 SMG6Q86US8 1419 aaKnown RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms