RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 USTQ9Y2C2 406 aa12.17□□□□□ -0.46
TRAV11-201ENST00000539512 EMILIN1Q9Y6C2 1016 aa12.17□□□□□ -0.46
TRAV11-201ENST00000539512 TNFRSF10AO00220 468 aa12.16□□□□□ -0.46
TRAV11-201ENST00000539512 MYT1Q01538 1121 aa12.16□□□□□ -0.46
TRAV11-201ENST00000539512 NNTQ13423 1086 aa12.16□□□□□ -0.46
TRAV11-201ENST00000539512 PPP1R26Q5T8A7 1209 aaPredicted RBP12.16□□□□□ -0.46
TRAV11-201ENST00000539512 CC2D2BQ6DHV5 1058 aa12.16□□□□□ -0.46
TRAV11-201ENST00000539512 ZNF594Q96JF6 807 aaPredicted RBP12.16□□□□□ -0.46
TRAV11-201ENST00000539512 LARGE2Q8N3Y3 721 aa12.14□□□□□ -0.47
TRAV11-201ENST00000539512 FAM200AQ8TCP9 573 aa12.14□□□□□ -0.47
TRAV11-201ENST00000539512 TMPRSS4Q9NRS4 437 aa12.14□□□□□ -0.47
TRAV11-201ENST00000539512 RGS20O76081 388 aa12.13□□□□□ -0.47
TRAV11-201ENST00000539512 ELOAQ14241 798 aaKnown RBP12.13□□□□□ -0.47
TRAV11-201ENST00000539512 CRTC2Q53ET0 693 aaPredicted RBP12.13□□□□□ -0.47
TRAV11-201ENST00000539512 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
TRAV11-201ENST00000539512 GDF9O60383 454 aa12.11□□□□□ -0.47
TRAV11-201ENST00000539512 NR3C2P08235 984 aa12.11□□□□□ -0.47
TRAV11-201ENST00000539512 ERVK-9P63128 1117 aa12.11□□□□□ -0.47
TRAV11-201ENST00000539512 PTK7Q13308 1070 aa12.11□□□□□ -0.47
TRAV11-201ENST00000539512 ANKMY2Q8IV38 441 aa12.11□□□□□ -0.47
TRAV11-201ENST00000539512 SCTRP47872 440 aa12.1□□□□□ -0.47
TRAV11-201ENST00000539512 CLDN10P78369 228 aa12.1□□□□□ -0.47
TRAV11-201ENST00000539512 CYP2U1Q7Z449 544 aa12.1□□□□□ -0.47
TRAV11-201ENST00000539512 TPCN2Q8NHX9 752 aa12.1□□□□□ -0.47
TRAV11-201ENST00000539512 J3QL48 77 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 PRR20EP86478 221 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 PRR20CP86479 221 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 PRR20DP86480 221 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 PRR20BP86481 221 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 PRR20AP86496 221 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 DPYDQ12882 1025 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 CCDC102BQ68D86 513 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 TRAIPQ9BWF2 469 aa12.09□□□□□ -0.47
TRAV11-201ENST00000539512 SEC13P55735 322 aa12.08□□□□□ -0.48
TRAV11-201ENST00000539512 WDR4P57081 412 aaKnown RBP12.08□□□□□ -0.48
TRAV11-201ENST00000539512 B4GALNT3Q6L9W6 998 aa12.07□□□□□ -0.48
TRAV11-201ENST00000539512 SIX5Q8N196 739 aa12.07□□□□□ -0.48
TRAV11-201ENST00000539512 STK32AQ8WU08 396 aa12.07□□□□□ -0.48
TRAV11-201ENST00000539512 TOR4AQ9NXH8 423 aa12.06□□□□□ -0.48
TRAV11-201ENST00000539512 ZMIZ1Q9ULJ6 1067 aa12.06□□□□□ -0.48
TRAV11-201ENST00000539512 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
TRAV11-201ENST00000539512 PCDHGA11Q9Y5H2 935 aa12.06□□□□□ -0.48
TRAV11-201ENST00000539512 ZIC2O95409 532 aaPredicted RBP12.05□□□□□ -0.48
TRAV11-201ENST00000539512 ESCO1Q5FWF5 840 aa12.05□□□□□ -0.48
TRAV11-201ENST00000539512 TMEM164Q5U3C3 297 aa12.05□□□□□ -0.48
TRAV11-201ENST00000539512 OSBPL3Q9H4L5 887 aa12.05□□□□□ -0.48
TRAV11-201ENST00000539512 KCTD17Q8N5Z5 321 aa12.04□□□□□ -0.48
TRAV11-201ENST00000539512 KIAA1024Q9UPX6 916 aa12.04□□□□□ -0.48
TRAV11-201ENST00000539512 LILRA1O75019 489 aa12.03□□□□□ -0.48
TRAV11-201ENST00000539512 ZBTB7CA1YPR0 619 aa12.02□□□□□ -0.49
TRAV11-201ENST00000539512 BACH1O14867 736 aa12.02□□□□□ -0.49
TRAV11-201ENST00000539512 ZBTB7BO15156 539 aaPredicted RBP12.02□□□□□ -0.49
TRAV11-201ENST00000539512 GNRH1P01148 92 aa12.02□□□□□ -0.49
TRAV11-201ENST00000539512 SMPD1P17405 629 aa12.02□□□□□ -0.49
TRAV11-201ENST00000539512 HINFPQ9BQA5 517 aa12.02□□□□□ -0.49
TRAV11-201ENST00000539512 SFI1A8K8P3 1242 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 ADH1AP07327 375 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 GDF10P55107 478 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 SWI5Q1ZZU3 235 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 TRIM67Q6ZTA4 783 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 AEBP1Q8IUX7 1158 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 ITPKCQ96DU7 683 aa12.01□□□□□ -0.49
TRAV11-201ENST00000539512 ZFAND3Q9H8U3 227 aa12□□□□□ -0.49
TRAV11-201ENST00000539512 FAM187AA6NFU0 413 aa11.99□□□□□ -0.49
TRAV11-201ENST00000539512 TMEM88BA6NKF7 163 aa11.99□□□□□ -0.49
TRAV11-201ENST00000539512 PATL2C9JE40 543 aaKnown RBP11.99□□□□□ -0.49
TRAV11-201ENST00000539512 UPP2O95045 317 aa11.99□□□□□ -0.49
TRAV11-201ENST00000539512 ADD1P35611 737 aaKnown RBP11.99□□□□□ -0.49
TRAV11-201ENST00000539512 CBLBQ13191 982 aa11.99□□□□□ -0.49
TRAV11-201ENST00000539512 TIMP2P16035 220 aa11.98□□□□□ -0.49
TRAV11-201ENST00000539512 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAV11-201ENST00000539512 HPS1Q92902 700 aa11.98□□□□□ -0.49
TRAV11-201ENST00000539512 ARHGEF10LQ9HCE6 1279 aa11.98□□□□□ -0.49
TRAV11-201ENST00000539512 CARNS1A5YM72 827 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 CAPN5O15484 640 aaPredicted RBP11.97□□□□□ -0.49
TRAV11-201ENST00000539512 BRD1O95696 1058 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 NLRP3Q96P20 1036 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 RAB6BQ9NRW1 208 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 ZNF358Q9NW07 568 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 SERTAD1Q9UHV2 236 aa11.97□□□□□ -0.49
TRAV11-201ENST00000539512 M0R2N6 131 aa11.96□□□□□ -0.49
TRAV11-201ENST00000539512 INHAP05111 366 aa11.96□□□□□ -0.49
TRAV11-201ENST00000539512 RELBQ01201 579 aa11.96□□□□□ -0.49
TRAV11-201ENST00000539512 CLP1Q92989 425 aaKnown RBP11.96□□□□□ -0.49
TRAV11-201ENST00000539512 MEN1O00255 615 aa11.95□□□□□ -0.5
TRAV11-201ENST00000539512 GTF2E1P29083 439 aaPredicted RBP11.95□□□□□ -0.5
TRAV11-201ENST00000539512 Q6ZVU0 165 aa11.95□□□□□ -0.5
TRAV11-201ENST00000539512 ETNK1Q9HBU6 452 aa11.95□□□□□ -0.5
TRAV11-201ENST00000539512 WASLO00401 505 aaPredicted RBP11.94□□□□□ -0.5
TRAV11-201ENST00000539512 PTGIRP43119 386 aa11.94□□□□□ -0.5
TRAV11-201ENST00000539512 SCNN1DP51172 638 aa11.94□□□□□ -0.5
TRAV11-201ENST00000539512 PKDCCQ504Y2 493 aa11.94□□□□□ -0.5
TRAV11-201ENST00000539512 TSEN2Q8NCE0 465 aaKnown RBP11.94□□□□□ -0.5
TRAV11-201ENST00000539512 AGBL1Q96MI9 1066 aa11.94□□□□□ -0.5
TRAV11-201ENST00000539512 KLF16Q9BXK1 252 aaPredicted RBP11.94□□□□□ -0.5
TRAV11-201ENST00000539512 TMEM229AB2RXF0 380 aa11.93□□□□□ -0.5
TRAV11-201ENST00000539512 PRMT3O60678 531 aa11.93□□□□□ -0.5
TRAV11-201ENST00000539512 DKK1O94907 266 aa11.93□□□□□ -0.5
TRAV11-201ENST00000539512 ATP2B4P23634 1241 aa11.93□□□□□ -0.5
TRAV11-201ENST00000539512 TSEN34Q9BSV6 310 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms